##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551174_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 337568 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0715055929472 33.0 31.0 34.0 30.0 34.0 2 32.18211145606219 33.0 31.0 34.0 30.0 34.0 3 32.14419613233482 33.0 31.0 34.0 30.0 34.0 4 35.75764290454072 37.0 35.0 37.0 35.0 37.0 5 32.08062671817234 37.0 35.0 37.0 0.0 37.0 6 33.86441546592094 37.0 35.0 37.0 17.0 37.0 7 35.50719262489336 37.0 35.0 37.0 32.0 37.0 8 35.73628424495213 37.0 35.0 37.0 35.0 37.0 9 37.66308714096123 39.0 37.0 39.0 35.0 39.0 10 37.30979239738364 39.0 37.0 39.0 34.0 39.0 11 37.269068750592474 39.0 37.0 39.0 34.0 39.0 12 37.13945930893924 39.0 37.0 39.0 34.0 39.0 13 37.05294340695801 39.0 37.0 39.0 33.0 39.0 14 38.24035453597497 40.0 37.0 41.0 33.0 41.0 15 38.3797931083515 40.0 37.0 41.0 34.0 41.0 16 38.342188833064746 40.0 37.0 41.0 34.0 41.0 17 38.3566955398616 40.0 37.0 41.0 34.0 41.0 18 38.29351123329226 40.0 37.0 41.0 34.0 41.0 19 38.16044174803299 40.0 37.0 41.0 34.0 41.0 20 38.23017584605176 40.0 37.0 41.0 34.0 41.0 21 38.18875308086074 40.0 37.0 41.0 34.0 41.0 22 38.23112380320409 40.0 37.0 41.0 34.0 41.0 23 38.244883993743485 40.0 37.0 41.0 34.0 41.0 24 38.209525191961326 40.0 37.0 41.0 34.0 41.0 25 37.9468018295573 40.0 36.0 41.0 34.0 41.0 26 37.98502227699308 40.0 36.0 41.0 34.0 41.0 27 37.964774504692386 40.0 36.0 41.0 34.0 41.0 28 37.890771637122 40.0 36.0 41.0 34.0 41.0 29 37.86424957341928 40.0 36.0 41.0 34.0 41.0 30 37.7277555929472 40.0 36.0 41.0 33.0 41.0 31 37.712771945208075 40.0 36.0 41.0 33.0 41.0 32 37.6340144800455 40.0 36.0 41.0 33.0 41.0 33 37.59982285050716 40.0 36.0 41.0 33.0 41.0 34 37.49723907479382 40.0 35.0 41.0 33.0 41.0 35 37.493435396720066 40.0 35.0 41.0 33.0 41.0 36 37.408933903687554 40.0 35.0 41.0 33.0 41.0 37 37.308089036875536 40.0 35.0 41.0 33.0 41.0 38 37.18738743008816 40.0 35.0 41.0 33.0 41.0 39 37.14592615413783 39.0 35.0 41.0 33.0 41.0 40 37.034476016684046 39.0 35.0 41.0 32.0 41.0 41 36.93566037065125 39.0 35.0 41.0 32.0 41.0 42 36.9071120485354 39.0 35.0 41.0 32.0 41.0 43 36.855774244004174 39.0 35.0 41.0 32.0 41.0 44 36.79105543179448 39.0 35.0 41.0 32.0 41.0 45 36.77418179448289 39.0 35.0 41.0 32.0 41.0 46 36.66790394824154 39.0 35.0 41.0 31.0 41.0 47 36.56889871077827 39.0 35.0 41.0 31.0 41.0 48 36.54771779315575 39.0 35.0 41.0 31.0 41.0 49 36.53702365153095 39.0 35.0 41.0 31.0 41.0 50 36.420119798085125 39.0 35.0 41.0 31.0 41.0 51 35.41452981325244 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 3.0 10 15.0 11 11.0 12 12.0 13 12.0 14 13.0 15 21.0 16 22.0 17 31.0 18 68.0 19 151.0 20 294.0 21 495.0 22 746.0 23 990.0 24 1343.0 25 1660.0 26 2088.0 27 2541.0 28 2931.0 29 3611.0 30 4406.0 31 6067.0 32 7981.0 33 12206.0 34 21569.0 35 29930.0 36 26129.0 37 39468.0 38 64215.0 39 108453.0 40 81.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.711181154611815 19.658853919802823 22.623589913735902 11.006375011849464 2 33.96945208076595 24.650440800075838 23.552884159635983 17.827222959522228 3 33.879988624514176 25.083538724049674 24.303843966252725 16.73262868518343 4 29.344013650582994 25.261873163333014 26.197980851265523 19.196132334818465 5 23.751955161626697 37.11252251398236 21.134704711347048 18.00081761304389 6 25.882192624893356 35.96193952033368 23.79935301924353 14.356514835529435 7 78.71332590766897 6.087069864442127 10.25126789269125 4.9483363351976495 8 79.44947388378046 6.845435586311499 8.65869987676557 5.0463906531424785 9 73.26908948715518 7.777692198312636 10.66185183429709 8.291366480235093 10 41.00566404398521 24.566902076026164 18.465612854298985 15.961821025689638 11 32.3161555597687 25.51160062565172 23.034470091951846 19.13777372262774 12 28.26897099251114 22.120876386387337 29.563524978670962 20.04662764243056 13 25.55929471987866 24.832922551900655 30.887702625841314 18.72008010237937 14 22.123838752488385 28.815231301545168 28.786200113754855 20.274729832211584 15 20.52801213385155 25.10723765285809 34.32997203526401 20.034778178026354 16 22.381564603279934 23.825125604322682 31.79685278225424 21.996457010143143 17 22.701796378803678 23.465494359654944 28.83507915442222 24.99763010711916 18 23.564733624040194 23.52326049862546 30.434756848990425 22.47724902834392 19 24.34324343539672 26.64885297184567 27.01796378803678 21.989939804720827 20 25.128862925395772 25.617357095459287 28.737024836477392 20.51675514266755 21 24.691025215660254 27.11601810598161 28.087674187126744 20.105282491231396 22 22.348386102948147 24.750272537681298 28.19787420608588 24.703467153284674 23 21.671781685467817 27.262062754763484 27.755000473978576 23.311155085790123 24 22.860875438430185 24.783747274623185 29.715494359654944 22.639882927291684 25 21.08434448762916 26.631671248459572 28.312517774196603 23.971466489714665 26 20.89771542326287 26.84496160773533 29.010451227604513 23.24687174139729 27 23.242131955635607 26.423120674945494 27.736930040762157 22.597817328656745 28 20.528308370461655 26.270855057351405 30.772466584510383 22.428369987676557 29 21.52099725092426 25.76192056119063 29.431699687174138 23.28538250071097 30 23.496895440326096 25.954770594369137 29.126872215375865 21.421461749928902 31 25.508934496160773 26.717579865390086 25.121753246753247 22.651732391695894 32 24.797374158688026 28.148106455588206 25.12797421556546 21.92654517015831 33 24.992297848137266 25.206773153853447 26.99574604227889 22.8051829557304 34 22.282325338894683 27.67057304009859 27.221182102568964 22.825919518437768 35 22.37800976395867 27.17289553512181 26.44326476443265 24.005829936486872 36 25.98350554554934 27.526009574367237 26.036828135368285 20.45365674471514 37 23.446238979998103 27.717378424495216 26.86895677315385 21.96742582235283 38 22.452068916484976 27.874976301071193 26.08600341264575 23.586951369798083 39 23.84408474736942 26.232936771257936 26.796378803678074 23.126599677694568 40 22.77170821878851 26.78008579012229 28.304519385723765 22.14368660536544 41 22.091252725376815 27.84624134989098 26.45244809934591 23.610057825386292 42 23.64975353114039 26.540134135937056 26.791342781306287 23.018769551616266 43 25.051248933548205 24.143283723575696 26.843184188074698 23.962283154801405 44 22.686392075078206 25.099239264385247 28.21861076879325 23.995757891743295 45 22.78296520997251 25.447613517868994 26.708100293866714 25.06132097829178 46 23.612427718267135 27.112167030050244 27.283095554080955 21.99230969760167 47 22.03319034979619 26.474962081713905 29.355566878377097 22.136280690112805 48 22.463918380889183 25.407917812114896 28.534695231775526 23.5934685752204 49 23.101419565835624 24.02271542326287 29.823324485733245 23.052540525168265 50 21.886553227794103 24.200161152715896 29.428441084462982 24.484844535027015 51 21.695480614276235 24.643331121433313 27.171414352071288 26.489773912219167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 122.0 1 380.5 2 639.0 3 909.0 4 1179.0 5 852.5 6 526.0 7 495.0 8 464.0 9 511.5 10 559.0 11 565.0 12 571.0 13 566.5 14 562.0 15 604.5 16 647.0 17 625.0 18 603.0 19 709.5 20 816.0 21 909.0 22 1002.0 23 1159.5 24 1317.0 25 1575.0 26 2181.0 27 2529.0 28 3271.5 29 4014.0 30 4426.0 31 4838.0 32 5450.0 33 6062.0 34 7158.5 35 8255.0 36 8716.0 37 9177.0 38 10351.0 39 11525.0 40 13183.5 41 14842.0 42 16897.5 43 18953.0 44 21318.0 45 23683.0 46 28587.5 47 33492.0 48 33985.5 49 34479.0 50 33619.0 51 32759.0 52 29520.5 53 26282.0 54 22843.5 55 19405.0 56 17900.5 57 16396.0 58 15499.0 59 14602.0 60 14022.0 61 13442.0 62 11558.5 63 9675.0 64 8479.5 65 7284.0 66 6320.5 67 5357.0 68 4438.5 69 3520.0 70 2944.0 71 2368.0 72 2007.0 73 1646.0 74 1319.5 75 782.0 76 571.0 77 440.0 78 309.0 79 226.5 80 144.0 81 115.5 82 87.0 83 52.0 84 17.0 85 11.5 86 6.0 87 4.0 88 2.0 89 1.0 90 0.0 91 1.0 92 2.0 93 4.5 94 7.0 95 5.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 337568.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.14829979016197 #Duplication Level Percentage of deduplicated Percentage of total 1 72.39669615908156 25.446207804166658 2 9.966570438072297 7.006160112742621 3 3.9114507360611026 4.1244252925657605 4 2.026176989119376 2.848667049659823 5 1.3499984576052728 2.3725075252083196 6 1.012627199000028 2.135527461967499 7 0.8263085065022246 2.033033737399083 8 0.7882005676479559 2.2163127877172952 9 0.6010966573067161 1.901477296249264 >10 7.015047482534868 44.57577674404002 >50 0.07026899989354325 1.6214621299502747 >100 0.029631505979204983 1.6687758533237549 >500 0.0025398433696461418 0.5454468864376681 >1k 0.003386457826194856 1.5042193185719652 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCG 1362 0.40347426296331407 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGC 1299 0.384811356526685 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTC 1261 0.3735543653426865 No Hit GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 1133 0.3356360792492179 No Hit CCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 719 0.21299412266565554 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 574 0.17003981420039813 No Hit CTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGCT 540 0.15996776945682056 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.924732202104465E-4 0.0 0.0 0.16618873826903025 0.0 2 5.924732202104465E-4 0.0 0.0 0.8952270357379847 0.0 3 5.924732202104465E-4 0.0 0.0 1.1852426770309983 0.0 4 5.924732202104465E-4 0.0 0.0 1.6325599582898853 0.0 5 5.924732202104465E-4 0.0 0.0 3.0796757986539007 0.0 6 5.924732202104465E-4 0.0 0.0 3.7894587164660156 0.0 7 5.924732202104465E-4 0.0 0.0 4.524421746137075 0.0 8 5.924732202104465E-4 0.0 0.0 5.6471584984358705 0.0 9 5.924732202104465E-4 0.0 0.0 6.009159635984454 0.0 10 5.924732202104465E-4 0.0 0.0 7.294234050620912 0.0 11 5.924732202104465E-4 0.0 0.0 8.566274054412741 0.0 12 5.924732202104465E-4 0.0 0.0 9.97724902834392 0.0 13 5.924732202104465E-4 0.0 0.0 10.427528675703858 0.0 14 5.924732202104465E-4 0.0 0.0 10.611787847189307 0.0 15 8.887098303156697E-4 0.0 0.0 11.0084486681202 0.0 16 8.887098303156697E-4 0.0 0.0 11.738671912029575 0.0 17 8.887098303156697E-4 0.0 0.0 12.569319366764622 0.0 18 8.887098303156697E-4 0.0 0.0 13.47372973741587 0.0 19 8.887098303156697E-4 0.0 0.0 14.041319082377477 0.0 20 8.887098303156697E-4 0.0 0.0 14.560029386671722 0.0 21 8.887098303156697E-4 0.0 0.0 15.180052611621955 0.0 22 8.887098303156697E-4 0.0 0.0 15.821701109109869 0.0 23 8.887098303156697E-4 0.0 0.0 16.47105175846052 0.0 24 8.887098303156697E-4 0.0 0.0 16.972580339368662 0.0 25 8.887098303156697E-4 0.0 0.0 17.41101052232439 0.0 26 8.887098303156697E-4 0.0 0.0 17.874028343918855 0.0 27 8.887098303156697E-4 0.0 0.0 18.295276803488484 0.0 28 0.001184946440420893 0.0 0.0 18.765108067115367 0.0 29 0.0014811830505261161 0.0 0.0 19.210647928713623 0.0 30 0.0014811830505261161 0.0 0.0 19.713953929282397 0.0 31 0.0014811830505261161 0.0 0.0 20.21163143425917 0.0 32 0.0014811830505261161 0.0 0.0 20.66191108161911 0.0 33 0.0014811830505261161 0.0 0.0 21.12522513982368 0.0 34 0.0014811830505261161 0.0 0.0 21.59090909090909 0.0 35 0.0017774196606313395 0.0 0.0 22.075552185041236 0.0 36 0.0017774196606313395 0.0 0.0 22.532645274433595 0.0 37 0.0017774196606313395 0.0 0.0 22.969298037728695 0.0 38 0.0017774196606313395 0.0 0.0 23.403580908142953 0.0 39 0.0017774196606313395 0.0 0.0 23.831939046355103 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGGT 20 7.0262E-4 45.0 4 TTTACGG 55 1.8189894E-12 45.0 2 CGACGGT 20 7.0262E-4 45.0 28 TCCGATT 20 7.0262E-4 45.0 14 ACGCAAC 20 7.0262E-4 45.0 40 TAAACGG 20 7.0262E-4 45.0 2 CCAGCGA 20 7.0262E-4 45.0 14 GTTAGCG 20 7.0262E-4 45.0 1 ATCCGTC 20 7.0262E-4 45.0 40 CGTTAGG 25 3.8849324E-5 45.0 2 CTACGAA 20 7.0262E-4 45.0 11 CGGTCTA 20 7.0262E-4 45.0 31 AGGGCGC 40 6.7902874E-9 45.0 6 CCACGCA 20 7.0262E-4 45.0 38 GCGTCTC 20 7.0262E-4 45.0 22 AGTCGTT 20 7.0262E-4 45.0 18 TGCGTAG 35 1.2085184E-7 45.0 1 CGGACGG 25 3.8849324E-5 45.0 2 TAACGGG 95 0.0 40.263157 3 ACGGGCG 45 1.9213985E-8 40.0 5 >>END_MODULE