##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551173_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 189463 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.997645978370446 33.0 31.0 34.0 30.0 34.0 2 32.13936230292986 33.0 31.0 34.0 30.0 34.0 3 32.044082485762395 33.0 31.0 34.0 30.0 34.0 4 35.78989565244929 37.0 35.0 37.0 35.0 37.0 5 35.85400315628909 37.0 35.0 37.0 35.0 37.0 6 35.83179829307041 37.0 35.0 37.0 35.0 37.0 7 26.923130109836748 36.0 10.0 37.0 0.0 37.0 8 31.243039538062842 36.0 19.0 37.0 17.0 37.0 9 36.02553532879771 39.0 32.0 39.0 32.0 39.0 10 36.683859117611355 38.0 35.0 39.0 33.0 39.0 11 37.1517077212965 39.0 37.0 39.0 34.0 39.0 12 37.15499068419692 39.0 37.0 39.0 34.0 39.0 13 37.09793996717037 39.0 37.0 39.0 33.0 39.0 14 38.242522286673385 40.0 37.0 41.0 34.0 41.0 15 38.32751513488122 40.0 38.0 41.0 34.0 41.0 16 38.26900766904356 40.0 37.0 41.0 34.0 41.0 17 38.16338810216243 40.0 37.0 41.0 34.0 41.0 18 38.09465172619456 40.0 37.0 41.0 33.0 41.0 19 37.998374352776004 40.0 37.0 41.0 34.0 41.0 20 38.077281580044655 40.0 37.0 41.0 34.0 41.0 21 38.027282371755966 40.0 37.0 41.0 34.0 41.0 22 38.03444472007727 40.0 37.0 41.0 34.0 41.0 23 37.95709980312779 40.0 37.0 41.0 34.0 41.0 24 37.952761225146865 40.0 37.0 41.0 33.0 41.0 25 37.848112824139804 40.0 36.0 41.0 33.0 41.0 26 37.74041369555005 40.0 36.0 41.0 33.0 41.0 27 37.569778795859875 40.0 36.0 41.0 33.0 41.0 28 37.560183254777975 40.0 36.0 41.0 33.0 41.0 29 37.53220417706888 40.0 36.0 41.0 33.0 41.0 30 37.34672732934663 40.0 36.0 41.0 32.0 41.0 31 37.25547996178673 39.0 36.0 41.0 32.0 41.0 32 37.10122820814618 39.0 35.0 41.0 31.0 41.0 33 36.99707594622697 39.0 35.0 41.0 31.0 41.0 34 36.83478568374828 39.0 35.0 41.0 31.0 41.0 35 36.69682734887551 39.0 35.0 41.0 30.0 41.0 36 36.51973208489257 39.0 35.0 41.0 30.0 41.0 37 36.45205660208062 39.0 35.0 41.0 30.0 41.0 38 36.307447892200585 39.0 35.0 41.0 30.0 41.0 39 36.27203728432465 39.0 35.0 41.0 30.0 41.0 40 36.09531676369529 39.0 35.0 40.0 29.0 41.0 41 35.95052332117616 39.0 35.0 40.0 28.0 41.0 42 35.8928075666489 39.0 35.0 40.0 28.0 41.0 43 35.827639169653175 39.0 35.0 40.0 28.0 41.0 44 35.60418129133393 38.0 35.0 40.0 27.0 41.0 45 35.450737083229974 38.0 34.0 40.0 26.0 41.0 46 35.246253885983016 38.0 34.0 40.0 25.0 41.0 47 35.10480146519373 38.0 34.0 40.0 24.0 41.0 48 35.01402912442007 38.0 34.0 40.0 24.0 41.0 49 34.842375556177196 38.0 34.0 40.0 23.0 41.0 50 34.62769511725244 38.0 34.0 40.0 23.0 41.0 51 32.25954407984673 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 4.0 10 12.0 11 9.0 12 6.0 13 5.0 14 4.0 15 7.0 16 22.0 17 25.0 18 64.0 19 107.0 20 195.0 21 334.0 22 556.0 23 841.0 24 1221.0 25 1526.0 26 1944.0 27 2312.0 28 2630.0 29 3181.0 30 3864.0 31 4829.0 32 6391.0 33 8380.0 34 13020.0 35 15912.0 36 17530.0 37 28199.0 38 36231.0 39 40090.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.46675076400142 23.182362783234723 27.861904435166764 12.488982017597102 2 30.065500915746085 26.011939006560645 26.851680803111954 17.070879274581316 3 31.060418129133392 24.543578429561443 28.00863493135863 16.387368509946533 4 29.33554308756855 25.391237339216627 27.279204910721354 17.99401466249347 5 25.328428241925867 30.792819706222325 24.682391812649435 19.196360239202377 6 26.68594923547078 34.74609818275864 24.061690145305416 14.506262436465168 7 63.74490005964225 27.269176567456444 5.3187165831851075 3.667206789716198 8 86.23319592743702 4.079424478658102 6.15951399481693 3.527865599087949 9 79.27880377699076 8.187350564490165 7.982033431329599 4.551812227189478 10 33.99027778510843 41.22915819975404 13.252191720810924 11.528372294326598 11 32.19837118593076 25.04130094002523 24.61641587011712 18.143912003926886 12 31.656840649625522 21.522935876661933 27.674532758374987 19.145690715337558 13 26.669587201722766 24.44962868739543 28.941270854995434 19.939513255886375 14 21.62533053947209 27.82654132996944 28.854710418393037 21.693417712165434 15 20.909623514881535 25.184864590975547 33.864131782986654 20.04138011115627 16 23.93237729794208 24.93679504705404 30.667729319181053 20.463098335822828 17 23.269978834917634 24.18414149464539 28.04294242147543 24.50293724896154 18 23.611998121005158 25.03338382692135 30.28401323741311 21.07060481466038 19 23.940294411045958 26.870154067021 27.349931121115993 21.839620400817044 20 25.386487071354303 27.091305426389322 27.21111773802801 20.31108976422837 21 24.26595166338546 26.960409156405206 29.15239387109884 19.621245309110485 22 24.063273567926192 23.455239281548376 28.623002908219547 23.858484242305884 23 21.936736988224613 26.570359384154163 28.92332539862664 22.56957822899458 24 22.85459430073418 24.882958677947673 30.10455867372521 22.157888347592934 25 21.36617703720515 26.923990436127372 28.224508215324363 23.48532431134311 26 21.30653478515594 27.770593730702036 27.898323155444597 23.024548328697424 27 21.561465827100808 27.498245039928644 28.50741305690293 22.432876076067622 28 19.30983886035796 26.669587201722766 31.45416255416625 22.566411383753028 29 22.27981188939265 24.826483271140013 29.74248270110787 23.15122213835947 30 22.364261095834014 25.423433599172395 30.14150520154331 22.070800103450278 31 23.874846276053898 25.300982249832423 28.434047808806994 22.39012366530668 32 24.547273082343253 25.467241625013852 27.59852847257776 22.386956820065134 33 23.580857476129903 24.60849875701324 29.596807819996517 22.213835946860335 34 22.920570243266493 23.758200809656767 30.742677989897764 22.578550957178976 35 21.30600697761568 24.75945171352718 29.83907148097518 24.09546982788196 36 23.037215709663627 25.790787647192325 30.507275826942465 20.66472081620158 37 22.05971614510485 26.23150694330819 29.67070087563271 22.038076035954248 38 19.982265666647315 27.775871806104625 28.806152124689255 23.43571040255881 39 22.823981463399186 24.57366345935618 30.04174957643445 22.560605500810187 40 23.452600243847083 23.68958582942316 29.766234040419505 23.091579886310257 41 20.80775665961164 24.8164549278751 29.71609232409494 24.659696088418322 42 21.557771174318997 24.157223310092206 30.009025508938418 24.275980006650375 43 21.879205966336436 24.317676802330798 30.11986509239271 23.683252138940055 44 21.16033209650433 24.70878218966236 29.48913508178378 24.64175063204953 45 22.239170708792745 24.55255115774584 28.413463314736916 24.7948148187245 46 22.480906562231148 24.957379541124126 29.236843077540204 23.32487081910452 47 20.90065078669714 24.461240453281118 31.084169468445026 23.553939291576718 48 21.31445189825982 23.1966135868217 31.466829935132452 24.022104579786028 49 21.901901690567552 22.5057135166233 31.622005351968458 23.97037944084069 50 20.704834189261227 23.305341940114957 31.312710133376964 24.67711373724685 51 20.549130964884966 23.070995392240174 29.461161282150076 26.918712360724783 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 191.0 2 308.0 3 496.5 4 685.0 5 510.5 6 336.0 7 289.0 8 242.0 9 249.5 10 257.0 11 281.5 12 306.0 13 290.0 14 274.0 15 321.5 16 369.0 17 355.0 18 341.0 19 389.5 20 438.0 21 521.0 22 604.0 23 792.5 24 981.0 25 1139.5 26 1479.5 27 1661.0 28 2082.5 29 2504.0 30 3067.0 31 3630.0 32 4061.5 33 4493.0 34 5073.5 35 5654.0 36 5998.5 37 6343.0 38 6819.0 39 7295.0 40 8311.5 41 9328.0 42 10842.0 43 12356.0 44 13578.5 45 14801.0 46 16275.5 47 17750.0 48 18194.5 49 18639.0 50 17778.0 51 16917.0 52 15036.5 53 13156.0 54 11789.0 55 10422.0 56 9619.5 57 8817.0 58 8241.0 59 7665.0 60 7243.0 61 6821.0 62 5973.0 63 5125.0 64 4294.0 65 3463.0 66 2811.0 67 2159.0 68 1843.0 69 1527.0 70 1214.5 71 902.0 72 778.0 73 654.0 74 508.5 75 279.5 76 196.0 77 180.0 78 164.0 79 117.0 80 70.0 81 51.5 82 33.0 83 25.5 84 18.0 85 18.0 86 18.0 87 10.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 189463.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.75774689517215 #Duplication Level Percentage of deduplicated Percentage of total 1 70.65079474934828 32.328211840834356 2 9.615428980090893 8.799607311190048 3 4.933444067640206 6.772298549057072 4 3.2805038410962695 6.004338577980925 5 2.448843057189656 5.602677039844192 6 1.8709483931990682 5.1366229817959175 7 1.418783306803239 4.544422921625858 8 1.1880868341523056 4.349134131730207 9 0.9793065264032113 4.032977415115353 >10 3.5954045262647933 21.622691501770795 >50 0.01384178835905599 0.40799522861983606 >100 0.004613929453018663 0.3990225004354412 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 255 0.13459092276592263 No Hit CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 227 0.11981231163868407 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09553316478679215 0.0 2 0.0 0.0 0.0 0.6233407050453122 0.0 3 0.0 0.0 0.0 0.8972728184394843 0.0 4 0.0 0.0 0.0 1.2181798029166644 0.0 5 0.0 0.0 0.0 2.188817869452083 0.0 6 0.0 0.0 0.0 2.6664836933860436 0.0 7 0.0 0.0 0.0 3.2022083467484417 0.0 8 0.0 0.0 0.0 4.233016472873332 0.0 9 0.0 0.0 0.0 4.615676939560759 0.0 10 0.0 0.0 0.0 5.5646748969455775 0.0 11 0.0 0.0 0.0 6.79077181296612 0.0 12 0.0 0.0 0.0 7.815774056148166 0.0 13 0.0 0.0 0.0 8.233269820492655 0.0 14 0.0 0.0 0.0 8.37102758850013 0.0 15 0.0 0.0 0.0 8.643904086813784 0.0 16 0.0 0.0 0.0 9.26618917677858 0.0 17 0.0 0.0 0.0 9.98664646923146 0.0 18 0.0 0.0 0.0 10.83852783920871 0.0 19 0.0 0.0 0.0 11.276080290083025 0.0 20 0.0 0.0 0.0 11.7980819473987 0.0 21 0.0 0.0 0.0 12.396087890511604 0.0 22 0.0 0.0 0.0 13.05373608567372 0.0 23 0.0 0.0 0.0 13.689744171685236 0.0 24 0.0 0.0 0.0 14.214384866702206 0.0 25 0.0 0.0 0.0 14.62976940088566 0.0 26 0.0 0.0 0.0 15.030375323941877 0.0 27 0.0 0.0 0.0 15.437314937481197 0.0 28 0.0 0.0 0.0 15.863255622469822 0.0 29 0.0 0.0 0.0 16.283918232055864 0.0 30 0.0 0.0 0.0 16.73888833175871 0.0 31 0.0 0.0 0.0 17.20071992948491 0.0 32 5.278075402585201E-4 0.0 0.0 17.618215693829402 0.0 33 5.278075402585201E-4 0.0 0.0 18.03676707325441 0.0 34 5.278075402585201E-4 0.0 0.0 18.459013105461224 0.0 35 5.278075402585201E-4 0.0 0.0 18.8817869452083 0.0 36 5.278075402585201E-4 0.0 0.0 19.296115864311236 0.0 37 5.278075402585201E-4 0.0 0.0 19.71941751159857 0.0 38 5.278075402585201E-4 0.0 0.0 20.156969962472886 0.0 39 5.278075402585201E-4 0.0 0.0 20.581855032380993 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACGA 40 6.7630026E-9 45.0 24 CGACGGT 40 6.7630026E-9 45.0 28 TAGCACG 25 3.8784397E-5 45.0 1 CGCAGGA 20 7.0183614E-4 45.0 4 CTATTGG 20 7.0183614E-4 45.0 2 CGGTCTA 40 6.7630026E-9 45.0 31 GCTACGG 20 7.0183614E-4 45.0 2 GTAAGGC 20 7.0183614E-4 45.0 4 TAGGAAC 20 7.0183614E-4 45.0 6 ACGGTCT 40 6.7630026E-9 45.0 30 GTTAGGA 55 6.002665E-11 40.909092 4 GTAGGGT 50 1.0713848E-9 40.5 4 TACGGGC 50 1.0713848E-9 40.5 4 TCGGGAA 45 1.9137588E-8 40.0 5 ACGGGAC 45 1.9137588E-8 40.0 5 CGGGCGA 45 1.9137588E-8 40.0 6 AACGGGA 85 0.0 39.705883 4 CGGGATA 40 3.4378718E-7 39.375 6 TACGGGA 75 0.0 39.0 4 ACGCCGG 35 6.2207055E-6 38.571426 27 >>END_MODULE