##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551172_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 105303 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99542273249575 33.0 31.0 34.0 30.0 34.0 2 32.127071403473785 33.0 31.0 34.0 30.0 34.0 3 32.00745467840422 33.0 31.0 34.0 30.0 34.0 4 35.77826842540099 37.0 35.0 37.0 35.0 37.0 5 35.85255880649174 37.0 35.0 37.0 35.0 37.0 6 35.83609203916318 37.0 35.0 37.0 35.0 37.0 7 26.8618557875844 36.0 10.0 37.0 0.0 37.0 8 31.201067395990616 36.0 19.0 37.0 17.0 37.0 9 36.0026305043541 39.0 32.0 39.0 32.0 39.0 10 36.712866679961635 38.0 35.0 39.0 33.0 39.0 11 37.165512853384996 39.0 37.0 39.0 34.0 39.0 12 37.15901731194743 39.0 37.0 39.0 34.0 39.0 13 37.03345583696571 39.0 37.0 39.0 33.0 39.0 14 38.18447717538911 40.0 37.0 41.0 33.0 41.0 15 38.29629735145247 40.0 37.0 41.0 34.0 41.0 16 38.245130718023226 40.0 37.0 41.0 34.0 41.0 17 38.16628206223944 40.0 37.0 41.0 34.0 41.0 18 38.09370103415857 40.0 37.0 41.0 33.0 41.0 19 37.994321149444936 40.0 37.0 41.0 34.0 41.0 20 38.05759570002754 40.0 37.0 41.0 34.0 41.0 21 37.97714215169558 40.0 37.0 41.0 33.0 41.0 22 37.96493927048612 40.0 37.0 41.0 33.0 41.0 23 37.89779968282005 40.0 36.0 41.0 33.0 41.0 24 37.86104859310751 40.0 36.0 41.0 33.0 41.0 25 37.78677720482797 40.0 36.0 41.0 33.0 41.0 26 37.651235007549644 40.0 36.0 41.0 33.0 41.0 27 37.53360303125267 40.0 36.0 41.0 33.0 41.0 28 37.528455979411795 40.0 36.0 41.0 33.0 41.0 29 37.57483642441336 40.0 36.0 41.0 33.0 41.0 30 37.469768192739046 40.0 36.0 41.0 33.0 41.0 31 37.30468267760653 40.0 36.0 41.0 32.0 41.0 32 37.2131943059552 39.0 35.0 41.0 32.0 41.0 33 37.13539975119417 39.0 35.0 41.0 32.0 41.0 34 36.969943876242844 39.0 35.0 41.0 31.0 41.0 35 36.93259451297684 39.0 35.0 41.0 31.0 41.0 36 36.78563763615472 39.0 35.0 41.0 31.0 41.0 37 36.664586953837976 39.0 35.0 41.0 30.0 41.0 38 36.56591929954512 39.0 35.0 41.0 30.0 41.0 39 36.58820736351291 39.0 35.0 41.0 30.0 41.0 40 36.38435752067842 39.0 35.0 41.0 30.0 41.0 41 36.360872909603714 39.0 35.0 40.0 30.0 41.0 42 36.29209044376704 39.0 35.0 40.0 30.0 41.0 43 36.24604237296183 39.0 35.0 40.0 30.0 41.0 44 36.02772950438259 39.0 35.0 40.0 29.0 41.0 45 35.94278415619688 38.0 35.0 40.0 29.0 41.0 46 35.84620571113833 38.0 35.0 40.0 28.0 41.0 47 35.71198351423986 38.0 35.0 40.0 28.0 41.0 48 35.65551788647997 38.0 35.0 40.0 28.0 41.0 49 35.464193802645696 38.0 34.0 40.0 27.0 41.0 50 35.22065848076503 38.0 34.0 40.0 26.0 41.0 51 33.0866547011956 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 7.0 10 15.0 11 4.0 12 3.0 13 2.0 14 2.0 15 7.0 16 10.0 17 22.0 18 44.0 19 63.0 20 101.0 21 164.0 22 241.0 23 442.0 24 537.0 25 739.0 26 983.0 27 1107.0 28 1338.0 29 1547.0 30 1963.0 31 2580.0 32 3176.0 33 4536.0 34 7263.0 35 9369.0 36 9647.0 37 15771.0 38 20572.0 39 23041.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.76524885330902 21.534999002877413 27.85865549889367 10.841096644919897 2 30.443577106065355 25.505446188617608 26.866281112598884 17.184695592718153 3 31.482483879851475 24.64127327806425 27.973562006780433 15.902680835303837 4 29.224238625680183 25.68112969241142 26.9602955281426 18.1343361537658 5 26.644065221313735 30.626857734347553 23.690683076455564 19.038393967883156 6 26.26136007521153 36.1271758639355 23.577675849690895 14.033788211162076 7 62.09414736522226 28.03243972156539 6.023570078725203 3.8498428344871467 8 84.01565007644606 5.424346884704139 6.752894029609793 3.8071090092400026 9 76.85630988670789 9.712923658395297 8.284664254579642 5.14610220031718 10 36.098686647104074 38.18124839748155 14.193327825418079 11.526737129996297 11 32.851865568882175 25.865359961254665 23.552035554542606 17.73073891532055 12 32.08740491723883 22.95091307939945 27.09704376893346 17.864638234428266 13 25.264237486111508 27.104640893421838 27.88239651291986 19.748725107546793 14 19.604379742267554 31.058944189624228 27.85865549889367 21.47802056921455 15 19.164696162502494 27.29741792731451 34.87649924503575 18.66138666514724 16 22.492236688413435 25.317417357530175 32.54987987046903 19.640466083587363 17 22.049704186965233 25.565273543963613 28.12740377767015 24.257618491401004 18 23.1712296895625 26.353475209633153 28.853878806871595 21.621416293932747 19 24.899575510669212 26.937504154677455 27.367691328832038 20.795229005821298 20 26.7371299962964 26.617475285604396 27.305015051802894 19.340379666296307 21 25.15502882159103 26.624122769531734 27.816871314207575 20.403977094669667 22 22.991747623524496 26.175892424717244 27.014425040122315 23.817934911635945 23 22.739143234285823 26.60607959887183 28.3296772171733 22.32509994966905 24 22.342193479767907 25.74665489112371 30.115951112503918 21.795200516604467 25 20.98040891522559 27.792180659620335 28.61456938548759 22.61284103966649 26 20.744898056085773 29.914627313561816 26.84728830137793 22.49318632897448 27 22.027862454061136 29.202396892776083 27.353446720416326 21.416293932746456 28 18.378393777955043 29.39327464554666 30.838627579461175 21.38970399703712 29 21.10101326647864 26.034395981121143 29.70760567125343 23.156985081146786 30 22.09813585557866 27.41897191912861 28.510108923772354 21.972783301520373 31 22.48653884504715 29.62593658300333 25.365849026143607 22.521675545805913 32 24.64127327806425 27.456957541570514 26.38386370758668 21.517905472778555 33 23.360208161210984 28.165389400112055 26.38196442646458 22.09243801221238 34 20.922480841001683 28.238511723312726 27.964065601169956 22.874941834515635 35 21.28714281644398 26.285101089237724 27.997303020806623 24.430453073511675 36 23.8169852710749 27.946022430510055 26.961245168703645 21.2757471297114 37 22.011718564523328 30.124497877553345 28.292641235292443 19.571142322630884 38 20.965214666248823 29.174857316505705 28.07707282793463 21.782855189310844 39 22.202596317293903 26.696295452171352 28.432238397766447 22.668869832768294 40 22.648927380986297 26.43894286012744 28.98302992317408 21.929099835712183 41 20.36409219110567 27.323058222462798 28.157792275623677 24.15505731080786 42 21.843632185217896 25.707719628120756 27.658281340512612 24.790366846148732 43 22.323200668546956 26.235719780063242 28.024842597077004 23.41623695431279 44 20.825617503774822 27.9469720710711 27.445561854837948 23.781848570316136 45 20.243487839852616 27.31831001965756 26.998281150584504 25.439920989905325 46 21.007948491495966 29.05425296525265 27.231892728602226 22.705905814649157 47 21.121905358821685 27.74469863156795 29.2365839529738 21.896812056636563 48 21.13235140499321 25.68112969241142 29.32964872795647 23.8568701746389 49 21.24535863175788 25.188266241227698 29.55661282204686 24.00976230496757 50 19.4837753910145 26.451288187421063 29.915576954122862 24.149359467441574 51 19.704092001177553 26.303144259897625 27.702914446881856 26.28984929204296 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 61.0 1 129.0 2 197.0 3 367.5 4 538.0 5 389.5 6 241.0 7 233.5 8 226.0 9 225.0 10 224.0 11 219.0 12 214.0 13 222.5 14 231.0 15 230.5 16 230.0 17 214.5 18 199.0 19 227.0 20 255.0 21 301.0 22 347.0 23 408.5 24 470.0 25 598.0 26 999.0 27 1272.0 28 1529.0 29 1786.0 30 1925.5 31 2065.0 32 2398.5 33 2732.0 34 2975.5 35 3219.0 36 3530.5 37 3842.0 38 4239.0 39 4636.0 40 5267.0 41 5898.0 42 6580.5 43 7263.0 44 7818.0 45 8373.0 46 8902.5 47 9432.0 48 9540.0 49 9648.0 50 8948.5 51 8249.0 52 7470.5 53 6692.0 54 6102.5 55 5513.0 56 4996.0 57 4479.0 58 4335.0 59 4191.0 60 4004.5 61 3818.0 62 3413.5 63 3009.0 64 2420.0 65 1831.0 66 1481.5 67 1132.0 68 967.0 69 802.0 70 664.5 71 527.0 72 429.5 73 332.0 74 267.5 75 142.0 76 81.0 77 67.5 78 54.0 79 43.5 80 33.0 81 23.0 82 13.0 83 10.0 84 7.0 85 8.0 86 9.0 87 5.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 105303.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.78217144810689 #Duplication Level Percentage of deduplicated Percentage of total 1 69.52292055590127 31.829102684633863 2 9.95436631404273 9.114650104935281 3 5.270690728064717 7.239109996866186 4 3.6880315287284797 6.75384367017084 5 2.63638249325866 6.034965765457774 6 2.1178178801078618 5.817498076977864 7 1.528728479568554 4.899195654444792 8 1.1180253059531218 4.094850099237438 9 0.9479361128396597 3.9058716275889576 >10 3.177763949388094 18.779142094717148 >50 0.02696535988384153 0.8518275832597362 >100 0.01037129226301597 0.6799426417101126 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 221 0.2098705639915292 No Hit GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 152 0.1443453652792418 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 139 0.13200003798562243 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10446046171524079 0.0 2 0.0 0.0 0.0 0.5403454792361091 0.0 3 0.0 0.0 0.0 0.697985812370018 0.0 4 0.0 0.0 0.0 0.940144155437167 0.0 5 0.0 0.0 0.0 1.6504752951008044 0.0 6 0.0 0.0 0.0 1.9866480537116702 0.0 7 0.0 0.0 0.0 2.380748886546442 0.0 8 0.0 0.0 0.0 3.1471088193118906 0.0 9 0.0 0.0 0.0 3.450044158286089 0.0 10 0.0 0.0 0.0 4.301871741545825 0.0 11 0.0 0.0 0.0 5.2211238046399435 0.0 12 0.0 0.0 0.0 6.023570078725203 0.0 13 0.0 0.0 0.0 6.337901104431973 0.0 14 0.0 0.0 0.0 6.452807612318737 0.0 15 0.0 0.0 0.0 6.673124222481791 0.0 16 0.0 0.0 0.0 7.190678328252757 0.0 17 0.0 0.0 0.0 7.831685706959916 0.0 18 0.0 0.0 0.0 8.620837013190508 0.0 19 0.0 0.0 0.0 8.989297550876993 0.0 20 0.0 0.0 0.0 9.42613220895891 0.0 21 0.0 0.0 0.0 9.927542425192065 0.0 22 0.0 0.0 0.0 10.526765619213128 0.0 23 0.0 0.0 0.0 10.990190213004379 0.0 24 0.0 0.0 0.0 11.36434859405715 0.0 25 0.0 0.0 0.0 11.748953021281444 0.0 26 0.0 0.0 0.0 12.080377577087072 0.0 27 0.0 0.0 0.0 12.426046741308415 0.0 28 0.0 0.0 0.0 12.785010873384424 0.0 29 0.0 0.0 0.0 13.12973039704472 0.0 30 0.0 0.0 0.0 13.569413976809777 0.0 31 0.0 0.0 0.0 14.004349353769598 0.0 32 0.0 0.0 0.0 14.405097670531704 0.0 33 0.0 0.0 0.0 14.746968272508855 0.0 34 0.0 0.0 0.0 15.178105087224486 0.0 35 0.0 0.0 0.0 15.561759873887734 0.0 36 0.0 0.0 0.0 15.972954236821364 0.0 37 0.0 0.0 0.0 16.34141477450785 0.0 38 0.0 0.0 0.0 16.762105543051955 0.0 39 0.0 0.0 0.0 17.200839482255965 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 20 7.004099E-4 45.000004 3 CCCTCGT 20 7.004099E-4 45.000004 14 CATGCAT 40 6.71389E-9 45.000004 25 TTCAATC 20 7.004099E-4 45.000004 30 ATATGGG 45 3.783498E-10 45.000004 3 GCTTGAG 20 7.004099E-4 45.000004 1 ACGGGAC 45 3.783498E-10 45.000004 5 TCGTGTA 20 7.004099E-4 45.000004 17 ATATCAC 40 6.71389E-9 45.000004 30 CCTCCGC 35 1.1979319E-7 45.000004 45 CATAGGA 20 7.004099E-4 45.000004 4 GCCCTCG 20 7.004099E-4 45.000004 13 GCCTCCG 35 1.1979319E-7 45.000004 44 ATAAGGA 20 7.004099E-4 45.000004 4 TTAGTGA 20 7.004099E-4 45.000004 25 TCTTTAG 20 7.004099E-4 45.000004 22 ATTTGCG 20 7.004099E-4 45.000004 1 CGCTTTC 20 7.004099E-4 45.000004 45 GAACGGG 25 3.866633E-5 45.0 3 GCGATAG 25 3.866633E-5 45.0 9 >>END_MODULE