SRR3551170_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551170_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	221294
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1601	0.7234719423029996	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	237	0.10709734561262392	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	233	0.10528979547570201	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACAAT	20	7.020927E-4	45.000004	43
GTCTCGC	20	7.020927E-4	45.000004	31
TCTCGCG	20	7.020927E-4	45.000004	32
CCGAGGG	35	1.20599E-7	45.000004	3
AGTCTCG	20	7.020927E-4	45.000004	30
ATGCGCG	20	7.020927E-4	45.000004	1
AGTACGG	20	7.020927E-4	45.000004	2
CTCACGT	85	0.0	45.0	45
CGACGGT	95	0.0	45.0	28
CGTAAAG	25	3.880565E-5	45.0	2
ACGGTCT	95	0.0	45.0	30
CGTTTTT	645	0.0	42.55814	1
TACGAAT	65	0.0	41.53846	12
CGAATAT	65	0.0	41.53846	14
CGACCAC	60	3.6379788E-12	41.249996	20
ATAGGAC	55	6.002665E-11	40.909092	5
TAGGGTA	110	0.0	40.909092	5
CGGTCTA	105	0.0	40.714287	31
CGTTTTA	105	0.0	40.714287	1
CAACGCA	75	0.0	39.0	17