##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551169_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 141084 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05709364633835 33.0 31.0 34.0 30.0 34.0 2 32.19184315726801 33.0 31.0 34.0 30.0 34.0 3 32.09092455558391 33.0 31.0 34.0 30.0 34.0 4 35.81477701227637 37.0 35.0 37.0 35.0 37.0 5 35.89037027586402 37.0 35.0 37.0 35.0 37.0 6 35.858049105497436 37.0 35.0 37.0 35.0 37.0 7 26.745513311218847 36.0 10.0 37.0 0.0 37.0 8 31.14991777947889 36.0 19.0 37.0 17.0 37.0 9 35.99549913526693 39.0 32.0 39.0 32.0 39.0 10 36.721974143063704 38.0 35.0 39.0 33.0 39.0 11 37.18676816648238 39.0 37.0 39.0 34.0 39.0 12 37.23722037934847 39.0 37.0 39.0 34.0 39.0 13 37.186257832213435 39.0 37.0 39.0 34.0 39.0 14 38.40037140994018 40.0 38.0 41.0 34.0 41.0 15 38.49086359899067 40.0 38.0 41.0 34.0 41.0 16 38.44242437129653 40.0 38.0 41.0 34.0 41.0 17 38.35337104136543 40.0 38.0 41.0 34.0 41.0 18 38.26219131864705 40.0 37.0 41.0 34.0 41.0 19 38.16308723880809 40.0 37.0 41.0 34.0 41.0 20 38.21476567151484 40.0 37.0 41.0 34.0 41.0 21 38.15687817186924 40.0 37.0 41.0 34.0 41.0 22 38.14944997306569 40.0 37.0 41.0 34.0 41.0 23 38.09178928865073 40.0 37.0 41.0 34.0 41.0 24 38.06927078903348 40.0 37.0 41.0 34.0 41.0 25 37.98952397153469 40.0 37.0 41.0 33.0 41.0 26 37.86145842193303 40.0 37.0 41.0 33.0 41.0 27 37.745846446088855 40.0 36.0 41.0 33.0 41.0 28 37.70983952822432 40.0 36.0 41.0 33.0 41.0 29 37.72313657112075 40.0 36.0 41.0 33.0 41.0 30 37.6539933656545 40.0 36.0 41.0 33.0 41.0 31 37.55795837940518 40.0 36.0 41.0 33.0 41.0 32 37.44529500155935 40.0 36.0 41.0 33.0 41.0 33 37.34586487482635 40.0 36.0 41.0 32.0 41.0 34 37.24857531683252 40.0 36.0 41.0 32.0 41.0 35 37.13569221173202 40.0 36.0 41.0 31.0 41.0 36 37.007414022851634 40.0 35.0 41.0 31.0 41.0 37 36.93877406367837 39.0 35.0 41.0 31.0 41.0 38 36.85899180629979 39.0 35.0 41.0 31.0 41.0 39 36.85465396501375 39.0 35.0 41.0 31.0 41.0 40 36.66148535624167 39.0 35.0 41.0 30.0 41.0 41 36.58968415979133 39.0 35.0 41.0 30.0 41.0 42 36.52185222987723 39.0 35.0 41.0 30.0 41.0 43 36.48647614187293 39.0 35.0 41.0 30.0 41.0 44 36.299325224688836 39.0 35.0 40.0 30.0 41.0 45 36.21997533384367 39.0 35.0 40.0 29.0 41.0 46 36.09726120608999 39.0 35.0 40.0 29.0 41.0 47 35.98192566130815 39.0 35.0 40.0 28.0 41.0 48 35.92455558390746 39.0 35.0 40.0 28.0 41.0 49 35.79091179722718 38.0 35.0 40.0 28.0 41.0 50 35.56754841087579 38.0 35.0 40.0 27.0 41.0 51 33.56912194153838 36.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 2.0 9 12.0 10 14.0 11 8.0 12 0.0 13 6.0 14 2.0 15 10.0 16 7.0 17 23.0 18 43.0 19 68.0 20 120.0 21 234.0 22 303.0 23 479.0 24 640.0 25 916.0 26 1198.0 27 1431.0 28 1730.0 29 1930.0 30 2397.0 31 3082.0 32 3985.0 33 5693.0 34 8966.0 35 11295.0 36 13098.0 37 21312.0 38 28987.0 39 33082.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.835020271611235 22.563153865782088 26.903121544611718 11.698704317994954 2 29.07558617561169 25.885996994698196 27.87346545320518 17.16495137648493 3 32.824416659578695 25.25162314649429 26.53950837798758 15.38445181593944 4 28.456097076918713 26.483513367922658 26.636613648606506 18.423775906552127 5 26.121317796490036 31.242380425845596 24.29261999943296 18.343681778231407 6 27.25822914008676 36.45771313543704 22.60213773354881 13.68191999092739 7 62.79875818661223 28.32284312891611 5.221711887953276 3.656686796518386 8 84.84803379546936 5.590286637747725 6.273567520058972 3.288112046723937 9 77.03921068299736 10.055711491026623 8.177397862266451 4.727679963709563 10 34.29800686116073 40.33979756740665 13.53874287658416 11.82345269484846 11 32.08726715998979 26.414051203538317 24.561963085821212 16.936718550650674 12 31.107000085055713 23.22375322502906 26.21204388874713 19.4572028011681 13 25.551444529500156 25.542230160755295 28.140682146806157 20.765643162938392 14 20.719571319214086 28.563834311474018 27.419834991919707 23.296759377392192 15 19.692523602959938 27.64948541294548 31.988035496583596 20.669955487510986 16 23.71849394686853 26.3339570752176 30.154376116356215 19.793172861557654 17 23.08199370587735 26.443111904964418 27.314224150151684 23.16067023900655 18 23.481755549885175 26.487766153497205 28.785687958946443 21.244790337671173 19 24.291911201837205 28.391596495704686 26.583453828924615 20.733038473533497 20 26.48705735590145 26.79042272688611 27.725326755691643 18.997193161520794 21 25.346602024325932 27.58144084375266 27.164667857446627 19.90728927447478 22 23.62635025941992 25.783221343313205 27.399988659238467 23.19043973802841 23 22.764452382977517 27.8132176575657 27.91315811856766 21.509171840889117 24 22.623401661421564 26.11352102293669 28.990530464120667 22.27254685152108 25 21.662272121572965 27.867086274843356 27.27240509200193 23.19823651158175 26 22.011709336281932 29.38958351053273 26.92438547248448 21.67432168070086 27 21.896175328173285 29.344220464404184 27.939383629610724 20.8202205778118 28 19.19636528592895 29.257038360125883 29.755323069944144 21.79127328400102 29 22.16480961696578 27.37872473136571 28.811204672393753 21.64526097927476 30 22.284596410648973 28.253380964531765 27.955685974313177 21.506336650506082 31 22.769413966147827 28.929573870885427 26.23047262623685 22.070539536729893 32 24.111167814918772 29.281137478381673 26.26024212525871 20.347452581440844 33 22.960789317002636 29.61143715800516 25.72013835729069 21.70763516770151 34 21.798361259958607 27.808256074395395 27.38864789770633 23.004734767939667 35 21.89546653057753 27.632474270647272 26.98179807774092 23.49026112103428 36 22.030138073771653 29.867313090074 26.55226673471124 21.55028210144311 37 21.27668622948031 29.908423350627995 27.126392787275666 21.68849763261603 38 20.13835729069207 30.122480224547076 26.438859119389868 23.300303365370983 39 22.210172663094326 28.009554591590824 27.329108899662614 22.451163845652236 40 22.132913725156644 27.304300983811064 28.436250744237473 22.12653454679482 41 19.850585466814096 27.799750503246294 27.622551104306652 24.72711292563296 42 21.33055484675796 27.494967537070114 27.49284114428284 23.681636471889085 43 21.40923137988716 28.222193870318392 27.489297156304044 22.879277593490404 44 20.92724901477134 28.196677156871086 26.787587536503075 24.088486291854498 45 20.803918233109354 28.549658359558844 26.139037736383997 24.507385670947805 46 21.229905588160243 29.980011907799607 26.4211391794959 22.368943324544244 47 20.564344645742963 28.06413200646423 28.436959541833236 22.93456380595957 48 20.83368773213121 26.85846729607893 28.62408210711349 23.683762864676364 49 20.8698364095149 27.055513027699813 28.518471265345468 23.556179297439822 50 19.50610983527544 27.59986958124238 28.553911145133398 24.340109438348787 51 19.635110997703496 27.118596013722325 27.065436194040434 26.180856794533753 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 149.0 2 239.0 3 440.0 4 641.0 5 467.0 6 293.0 7 285.5 8 278.0 9 259.5 10 241.0 11 254.5 12 268.0 13 273.5 14 279.0 15 292.5 16 306.0 17 315.0 18 324.0 19 342.0 20 360.0 21 452.0 22 544.0 23 610.0 24 676.0 25 829.5 26 1336.5 27 1690.0 28 2049.0 29 2408.0 30 2804.0 31 3200.0 32 3601.0 33 4002.0 34 4655.0 35 5308.0 36 5507.0 37 5706.0 38 6258.5 39 6811.0 40 7404.5 41 7998.0 42 8576.5 43 9155.0 44 9757.5 45 10360.0 46 10944.0 47 11528.0 48 11508.0 49 11488.0 50 11077.0 51 10666.0 52 9659.0 53 8652.0 54 7920.5 55 7189.0 56 6775.5 57 6362.0 58 6289.5 59 6217.0 60 5873.0 61 5529.0 62 4742.0 63 3955.0 64 3406.5 65 2858.0 66 2295.0 67 1732.0 68 1411.5 69 1091.0 70 857.5 71 624.0 72 518.5 73 413.0 74 356.5 75 242.0 76 184.0 77 126.0 78 68.0 79 56.0 80 44.0 81 33.5 82 23.0 83 18.0 84 13.0 85 11.5 86 10.0 87 7.5 88 5.0 89 4.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 141084.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.60485951631652 #Duplication Level Percentage of deduplicated Percentage of total 1 67.96903516242851 31.676873352045593 2 10.769254167173623 10.03799155113266 3 6.057610414892323 8.469422471718977 4 4.028774790120453 7.510419324657651 5 2.772539238350164 6.460690085339231 6 2.047086020197104 5.724249383346091 7 1.5771383379973234 5.145161747611352 8 1.2896946100498845 4.808482889626038 9 1.0174595449568073 4.26767032406226 >10 2.4531573184085653 14.755039550905844 >50 0.007604331427180922 0.27855745513311214 >100 0.010646063998053292 0.8654418644211959 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 259 0.1835785773014658 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 249 0.17649060134388025 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCG 153 0.10844603215105894 No Hit GCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 152 0.10773723455530038 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC 149 0.10561084176802472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07796773553344107 0.0 2 0.0 0.0 0.0 0.3877122848799297 0.0 3 0.0 0.0 0.0 0.4833999603073346 0.0 4 0.0 0.0 0.0 0.6450058121402852 0.0 5 0.0 0.0 0.0 1.12344418927731 0.0 6 0.0 0.0 0.0 1.3715233477928044 0.0 7 0.0 0.0 0.0 1.6670919452241217 0.0 8 0.0 0.0 0.0 2.3943182784723995 0.0 9 0.0 0.0 0.0 2.660826174477616 0.0 10 0.0 0.0 0.0 3.3837997221513425 0.0 11 0.0 0.0 0.0 4.160641887102719 0.0 12 0.0 0.0 0.0 4.931813671288027 0.0 13 0.0 0.0 0.0 5.213206316804174 0.0 14 0.0 0.0 0.0 5.3181083609764395 0.0 15 0.0 0.0 0.0 5.541379603640385 0.0 16 0.0 0.0 0.0 5.953191006776105 0.0 17 0.0 0.0 0.0 6.4500581214028525 0.0 18 0.0 0.0 0.0 7.01071701964787 0.0 19 0.0 0.0 0.0 7.314791188228289 0.0 20 0.0 0.0 0.0 7.6741515692778774 0.0 21 0.0 0.0 0.0 8.102974114711802 0.0 22 0.0 0.0 0.0 8.582830087040344 0.0 23 0.0 0.0 0.0 9.023702191602165 0.0 24 0.0 0.0 0.0 9.392985738992373 0.0 25 0.0 0.0 0.0 9.715488645062516 0.0 26 0.0 0.0 0.0 10.001134076153214 0.0 27 0.0 0.0 0.0 10.29741147118029 0.0 28 0.0 0.0 0.0 10.587309687845538 0.0 29 0.0 0.0 0.0 10.933911712171472 0.0 30 0.0 0.0 0.0 11.303904057157439 0.0 31 0.0014175951915171103 0.0 0.0 11.64625329590882 0.0 32 0.0014175951915171103 0.0 0.0 11.962377023617137 0.0 33 0.0014175951915171103 0.0 0.0 12.287006322474554 0.0 34 0.0014175951915171103 0.0 0.0 12.630064358821695 0.0 35 0.0014175951915171103 0.0 0.0 12.996512715828867 0.0 36 0.0014175951915171103 0.0 0.0 13.359417084857249 0.0 37 0.0014175951915171103 0.0 0.0 13.721612656289869 0.0 38 0.0014175951915171103 0.0 0.0 14.08451702531825 0.0 39 0.0014175951915171103 0.0 0.0 14.42261347849508 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGG 30 2.1519336E-6 45.000004 3 GGCACGG 20 7.0122356E-4 45.0 2 GACAACA 20 7.0122356E-4 45.0 9 GCACGGG 45 3.8016879E-10 45.0 3 TTGAGCG 20 7.0122356E-4 45.0 1 CTACGGG 20 7.0122356E-4 45.0 3 GCGATGT 40 6.7429937E-9 45.0 9 CACACCG 20 7.0122356E-4 45.0 17 ATAGTTA 20 7.0122356E-4 45.0 37 AGTACGG 20 7.0122356E-4 45.0 2 CCCGATG 20 7.0122356E-4 45.0 37 CGAAGGA 25 3.8733677E-5 44.999996 4 TGGGATC 80 0.0 42.1875 6 ATAAGGA 60 3.6379788E-12 41.250004 4 CGGGCGA 55 6.002665E-11 40.909092 6 ATGCGGG 55 6.002665E-11 40.909092 3 TTGGGAT 125 0.0 39.6 5 TAGGGTC 40 3.4295408E-7 39.375 5 GCTACGA 80 0.0 39.375 10 AGCTACG 80 0.0 39.375 9 >>END_MODULE