SRR3551166_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551166_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	96161
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	233	0.24230197273322868	No Hit
GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC	136	0.14142947764686306	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCG	101	0.10503218560539095	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	20	7.001047E-4	45.0	25
AAGTACG	25	3.8641076E-5	45.0	1
TTGGCGG	20	7.001047E-4	45.0	2
AGTCCGT	20	7.001047E-4	45.0	20
ACGCCGG	20	7.001047E-4	45.0	27
TGCCAAT	25	3.8641076E-5	45.0	14
GACAATA	20	7.001047E-4	45.0	21
GACCGAT	20	7.001047E-4	45.0	9
GTCTCAC	20	7.001047E-4	45.0	22
CACGCCG	20	7.001047E-4	45.0	26
GTAGGGT	35	1.1964585E-7	45.0	4
CACGACG	20	7.001047E-4	45.0	26
CGACAAT	20	7.001047E-4	45.0	20
GTCAGAC	20	7.001047E-4	45.0	33
GTCCGTT	20	7.001047E-4	45.0	21
GATGCGG	25	3.8641076E-5	45.0	2
GCAGGGT	25	3.8641076E-5	45.0	4
ACCACCT	20	7.001047E-4	45.0	40
CGGTCTA	20	7.001047E-4	45.0	31
TGGGCTG	20	7.001047E-4	45.0	6