##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551166_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 96161 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.126319401836504 33.0 31.0 34.0 30.0 34.0 2 32.25679849419203 33.0 31.0 34.0 30.0 34.0 3 32.1378729422531 33.0 31.0 34.0 30.0 34.0 4 35.88847869718493 37.0 35.0 37.0 35.0 37.0 5 35.9641746654049 37.0 35.0 37.0 35.0 37.0 6 35.92821414086792 37.0 35.0 37.0 35.0 37.0 7 26.723027006790694 36.0 10.0 37.0 0.0 37.0 8 31.137352980938218 37.0 19.0 37.0 17.0 37.0 9 35.994696394588246 39.0 32.0 39.0 32.0 39.0 10 36.80100040556982 38.0 35.0 39.0 34.0 39.0 11 37.15541643701709 39.0 37.0 39.0 34.0 39.0 12 37.13931843470846 39.0 37.0 39.0 34.0 39.0 13 36.99590270483876 39.0 37.0 39.0 33.0 39.0 14 38.18539740643296 40.0 37.0 41.0 33.0 41.0 15 38.302835869011346 40.0 37.0 41.0 34.0 41.0 16 38.26054221565916 40.0 37.0 41.0 34.0 41.0 17 38.13911045018251 40.0 37.0 41.0 34.0 41.0 18 38.04296960306153 40.0 37.0 41.0 33.0 41.0 19 37.96349871569555 40.0 36.0 41.0 34.0 41.0 20 37.99138944062562 40.0 36.0 41.0 34.0 41.0 21 37.914622352097005 40.0 36.0 41.0 33.0 41.0 22 37.891598465074196 40.0 36.0 41.0 33.0 41.0 23 37.85451482409709 40.0 36.0 41.0 33.0 41.0 24 37.77477355684737 40.0 36.0 41.0 33.0 41.0 25 37.70575389191044 40.0 35.0 41.0 33.0 41.0 26 37.52781273073283 39.0 35.0 41.0 33.0 41.0 27 37.397489626771765 39.0 35.0 41.0 33.0 41.0 28 37.39488982019738 39.0 35.0 41.0 33.0 41.0 29 37.39378750220983 39.0 35.0 41.0 33.0 41.0 30 37.29187508449371 39.0 35.0 41.0 33.0 41.0 31 37.129262382878714 39.0 35.0 41.0 32.0 41.0 32 36.98767691683739 39.0 35.0 41.0 32.0 41.0 33 36.87754911034619 39.0 35.0 41.0 31.0 41.0 34 36.72946412786889 39.0 35.0 41.0 31.0 41.0 35 36.61595657283098 39.0 35.0 41.0 31.0 41.0 36 36.456869208930854 39.0 35.0 41.0 30.0 41.0 37 36.34687659238153 39.0 35.0 41.0 30.0 41.0 38 36.21717744199832 39.0 35.0 41.0 30.0 41.0 39 36.124187560445506 39.0 35.0 40.0 30.0 41.0 40 35.87779869177733 38.0 35.0 40.0 29.0 41.0 41 35.73011927912563 38.0 35.0 40.0 28.0 41.0 42 35.67188361185928 38.0 35.0 40.0 28.0 41.0 43 35.61583178211541 38.0 35.0 40.0 27.0 41.0 44 35.40059899543474 38.0 34.0 40.0 27.0 41.0 45 35.26991191855326 38.0 34.0 40.0 26.0 41.0 46 35.06313370285251 38.0 34.0 40.0 25.0 41.0 47 34.893667911107414 38.0 34.0 40.0 24.0 41.0 48 34.79803662607502 38.0 34.0 40.0 24.0 41.0 49 34.62906999719221 37.0 34.0 40.0 24.0 41.0 50 34.42792816214474 37.0 34.0 40.0 23.0 41.0 51 32.238090286082716 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 10.0 10 6.0 11 8.0 12 3.0 13 5.0 14 5.0 15 6.0 16 17.0 17 24.0 18 46.0 19 73.0 20 124.0 21 180.0 22 275.0 23 431.0 24 558.0 25 843.0 26 990.0 27 1176.0 28 1391.0 29 1547.0 30 1896.0 31 2413.0 32 3041.0 33 4447.0 34 7218.0 35 9261.0 36 9110.0 37 14113.0 38 17661.0 39 19273.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.36003161364795 21.505599983361236 25.752644003286157 13.38172439970466 2 31.971381329229104 25.4562660538056 25.724566092282735 16.847786524682565 3 32.11385072950573 24.297792244257028 26.58250226183172 17.00585476440553 4 29.219746050893814 25.152608645916747 25.95958860660767 19.668056696581772 5 25.70792733020663 29.065837501689874 24.368506983080458 20.857728185023035 6 26.642817774357585 34.25817119206331 24.26555464273458 14.833456390844521 7 59.86730587244309 28.702904503904907 6.957082393069955 4.472707230582045 8 80.62520148500951 5.739332993625275 9.202275350713906 4.4331901706513035 9 74.77875646051933 8.332900032237601 10.865111635694303 6.023231871548757 10 44.52636723827747 23.488732438306588 18.20280571125508 13.782094612160856 11 34.55974875469265 24.998700096712806 23.161156809933342 17.280394338661203 12 31.655244849783177 23.279707989725566 27.230374060169922 17.834673100321336 13 25.871195183078378 25.85039673048325 28.269256767296515 20.009151319141854 14 20.284730816027288 28.83913436840299 29.878017075529577 20.99811774004014 15 19.804286561079856 25.7516040806564 35.02251432493422 19.42159503332952 16 23.286987448133857 23.617682844396377 33.384636183067975 19.710693524401783 17 23.208993250902132 24.076288724118925 28.613471157745863 24.10124686723308 18 24.11996547456869 26.039662649098904 29.154230925219167 20.686140951113238 19 25.95750876134816 26.22892856771456 27.143020559270393 20.670542111666894 20 27.522592319131455 26.003265357057437 27.394681835671424 19.07946048813968 21 25.750564158026645 25.65801104397833 28.13302690279843 20.458397895196597 22 23.466894063081707 24.500577157059514 28.850573517330307 23.18195526252847 23 24.27387402377263 25.124530734913325 28.78505839165566 21.816536849658384 24 24.401784507232662 24.290512785848733 29.55876082819438 21.748941878724224 25 23.462734372562682 25.550899013113426 27.358284543629953 23.62808207069394 26 21.566955418516862 28.73306226016784 27.640103576293924 22.05987874502137 27 22.05467913187259 28.026954794563284 29.08767587691476 20.830690196649368 28 20.210896309314588 27.538191158577803 30.9709757594035 21.27993677270411 29 22.920934682459627 27.458117116086562 28.892170422520564 20.728777778933246 30 22.44361019540146 26.420274331589727 29.887376379197388 21.24873909381142 31 24.297792244257028 26.269485550275057 27.638023731034412 21.794698474433503 32 26.565863499755622 26.401555724254116 26.83624338349227 20.196337392498 33 24.6867233077859 26.14053514418527 26.841442996641053 22.331298551387775 34 22.406172980730233 26.842482919270804 28.635309532970748 22.116034567028215 35 23.74143363733738 25.68504903235199 27.942721061553023 22.630796268757607 36 22.904295920383525 27.15133994030844 29.043999126464993 20.900365012843043 37 23.398259169517786 27.60682605214172 28.613471157745863 20.381443620594627 38 23.09564168425869 26.75616934100103 26.029263422801343 24.118925551938936 39 24.910306673183516 24.909266750553762 26.815444930897144 23.364981645365585 40 24.030532128409646 24.66072524204199 28.081030771310616 23.227711858237747 41 20.730857624192762 26.269485550275057 28.96496500660351 24.03469181892867 42 22.081717120246253 26.097898316365264 28.448123459614607 23.372261103773877 43 23.54488826031343 24.84895123802789 28.349330809787755 23.256829691870927 44 22.098355882322355 26.48578945726438 27.971838895186195 23.444015765227068 45 23.045725398030388 26.787367019893722 26.755129418371272 23.411778163704618 46 23.132038976300162 26.463951082039493 27.743055916639804 22.660954025020537 47 21.528478281215875 26.11037738792234 29.781304270962238 22.579840059899546 48 23.55944717713002 24.3341895362985 28.923368101413256 23.182995185158227 49 22.33857800979607 23.225632012978235 29.299820093385055 25.13596988384064 50 20.840049500317175 24.518255841765374 29.796903110408586 24.844791547508866 51 21.532637971734903 25.38139162446314 27.399881448820206 25.686088954981752 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 98.0 1 197.0 2 296.0 3 473.0 4 650.0 5 482.5 6 315.0 7 294.5 8 274.0 9 255.5 10 237.0 11 245.0 12 253.0 13 256.0 14 259.0 15 270.5 16 282.0 17 275.5 18 269.0 19 262.0 20 255.0 21 292.0 22 329.0 23 375.0 24 421.0 25 555.0 26 836.0 27 983.0 28 1267.0 29 1551.0 30 1748.0 31 1945.0 32 2057.5 33 2170.0 34 2355.5 35 2541.0 36 2735.5 37 2930.0 38 3193.0 39 3456.0 40 4077.0 41 4698.0 42 5193.0 43 5688.0 44 6270.0 45 6852.0 46 7367.0 47 7882.0 48 7788.5 49 7695.0 50 7434.0 51 7173.0 52 6607.0 53 6041.0 54 5524.0 55 5007.0 56 4891.5 57 4776.0 58 4699.0 59 4622.0 60 4503.5 61 4385.0 62 3967.0 63 3549.0 64 2959.0 65 2369.0 66 2025.0 67 1681.0 68 1475.0 69 1269.0 70 1036.0 71 803.0 72 700.5 73 598.0 74 494.0 75 308.5 76 227.0 77 169.5 78 112.0 79 81.5 80 51.0 81 40.0 82 29.0 83 27.5 84 26.0 85 20.0 86 14.0 87 10.5 88 7.0 89 7.0 90 7.0 91 4.5 92 2.0 93 2.0 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 96161.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.005137217790995 #Duplication Level Percentage of deduplicated Percentage of total 1 69.57887836524334 32.00985846653009 2 9.64533556364294 8.874699722340658 3 5.501932683831009 7.593515042480839 4 3.7433034200592235 6.888447499506037 5 2.660548384909243 6.119944676116098 6 1.9846741562874386 5.478312413556432 7 1.5416261669567575 4.964590634456796 8 1.1799543389317118 4.342716901862501 9 0.9945975270688758 4.11809361383513 >10 3.1533262505933677 18.850677509593286 >50 0.009041795700626144 0.27037988373665 >100 0.006781346775469608 0.4887636359854826 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 233 0.24230197273322868 No Hit GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 136 0.14142947764686306 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCG 101 0.10503218560539095 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0655151256746498 0.0 2 0.0 0.0 0.0 0.3650128430444775 0.0 3 0.0 0.0 0.0 0.5324403864352493 0.0 4 0.0 0.0 0.0 0.7622632876114017 0.0 5 0.0 0.0 0.0 1.4798099021432805 0.0 6 0.0 0.0 0.0 1.8521022035960524 0.0 7 0.0 0.0 0.0 2.225434427678581 0.0 8 0.0 0.0 0.0 2.859787231829952 0.0 9 0.0 0.0 0.0 3.1228876571583073 0.0 10 0.0 0.0 0.0 3.962105219371679 0.0 11 0.0 0.0 0.0 4.941712336602157 0.0 12 0.0 0.0 0.0 5.760131446220401 0.0 13 0.0 0.0 0.0 6.077307848296087 0.0 14 0.0 0.0 0.0 6.220817171202462 0.0 15 0.0 0.0 0.0 6.441280768710808 0.0 16 0.0 0.0 0.0 6.979960690924595 0.0 17 0.0 0.0 0.0 7.548798369401316 0.0 18 0.0 0.0 0.0 8.19355039985025 0.0 19 0.0 0.0 0.0 8.558563242894728 0.0 20 0.0 0.0 0.0 8.884059026008465 0.0 21 0.0 0.0 0.0 9.33226567943345 0.0 22 0.0 0.0 0.0 9.751354499225258 0.0 23 0.0 0.0 0.0 10.159004170089746 0.0 24 0.0 0.0 0.0 10.481380185314213 0.0 25 0.0 0.0 0.0 10.775678289535259 0.0 26 0.0 0.0 0.0 11.075176006905087 0.0 27 0.0 0.0 0.0 11.36739426586662 0.0 28 0.0 0.0 0.0 11.683530745312549 0.0 29 0.0 0.0 0.0 11.997587379498965 0.0 30 0.0 0.0 0.0 12.328282775761483 0.0 31 0.0 0.0 0.0 12.634020028909848 0.0 32 0.0 0.0 0.0 12.965755347802123 0.0 33 0.0 0.0 0.0 13.262133297282682 0.0 34 0.0 0.0 0.0 13.568910473060804 0.0 35 0.0 0.0 0.0 13.891286488285271 0.0 36 0.0 0.0 0.0 14.205343122471689 0.0 37 0.0 0.0 0.0 14.55475712606982 0.0 38 0.0 0.0 0.0 14.89065213548112 0.0 39 0.0 0.0 0.0 15.239026216449496 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.001047E-4 45.0 25 AAGTACG 25 3.8641076E-5 45.0 1 TTGGCGG 20 7.001047E-4 45.0 2 AGTCCGT 20 7.001047E-4 45.0 20 ACGCCGG 20 7.001047E-4 45.0 27 TGCCAAT 25 3.8641076E-5 45.0 14 GACAATA 20 7.001047E-4 45.0 21 GACCGAT 20 7.001047E-4 45.0 9 GTCTCAC 20 7.001047E-4 45.0 22 CACGCCG 20 7.001047E-4 45.0 26 GTAGGGT 35 1.1964585E-7 45.0 4 CACGACG 20 7.001047E-4 45.0 26 CGACAAT 20 7.001047E-4 45.0 20 GTCAGAC 20 7.001047E-4 45.0 33 GTCCGTT 20 7.001047E-4 45.0 21 GATGCGG 25 3.8641076E-5 45.0 2 GCAGGGT 25 3.8641076E-5 45.0 4 ACCACCT 20 7.001047E-4 45.0 40 CGGTCTA 20 7.001047E-4 45.0 31 TGGGCTG 20 7.001047E-4 45.0 6 >>END_MODULE