##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551163_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 260890 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.929878492851394 33.0 31.0 34.0 30.0 34.0 2 32.04989842462341 33.0 31.0 34.0 30.0 34.0 3 31.56870328490935 33.0 31.0 34.0 28.0 34.0 4 35.51648970830618 37.0 35.0 37.0 33.0 37.0 5 35.72805396910575 37.0 35.0 37.0 35.0 37.0 6 35.731499865843844 37.0 35.0 37.0 35.0 37.0 7 26.771443903560886 35.0 10.0 37.0 0.0 37.0 8 31.11804208670321 35.0 19.0 37.0 17.0 37.0 9 35.892560082793516 39.0 32.0 39.0 32.0 39.0 10 36.713879412779335 38.0 35.0 39.0 33.0 39.0 11 37.05941584575875 39.0 37.0 39.0 34.0 39.0 12 37.11265284219403 39.0 37.0 39.0 34.0 39.0 13 37.106401165242055 39.0 37.0 39.0 34.0 39.0 14 38.296289623979455 40.0 38.0 41.0 34.0 41.0 15 38.37582889340335 40.0 38.0 41.0 34.0 41.0 16 38.32640959791483 40.0 38.0 41.0 34.0 41.0 17 38.212434359308524 40.0 37.0 41.0 33.0 41.0 18 38.02933420215417 40.0 37.0 41.0 33.0 41.0 19 37.85270420483729 40.0 37.0 41.0 33.0 41.0 20 37.79231093564337 40.0 36.0 41.0 33.0 41.0 21 37.72568898769596 40.0 36.0 41.0 33.0 41.0 22 37.70576488175093 39.0 35.0 41.0 33.0 41.0 23 37.64648319214995 39.0 35.0 41.0 33.0 41.0 24 37.57117175821227 39.0 35.0 41.0 33.0 41.0 25 37.441185940434664 39.0 35.0 41.0 33.0 41.0 26 37.304607305761046 39.0 35.0 41.0 33.0 41.0 27 37.15687071179424 39.0 35.0 41.0 32.0 41.0 28 37.04545210625168 39.0 35.0 41.0 32.0 41.0 29 36.939361416689025 39.0 35.0 41.0 32.0 41.0 30 36.78995362029974 39.0 35.0 41.0 31.0 41.0 31 36.60999655027023 39.0 35.0 41.0 31.0 41.0 32 36.382410211200124 39.0 35.0 41.0 30.0 41.0 33 36.150101575376596 39.0 35.0 41.0 30.0 41.0 34 35.838633140404 39.0 35.0 40.0 27.0 41.0 35 35.57577906397332 39.0 35.0 40.0 26.0 41.0 36 35.367725861474185 38.0 35.0 40.0 25.0 41.0 37 35.18503200582621 38.0 34.0 40.0 24.0 41.0 38 34.98147495112883 38.0 34.0 40.0 23.0 41.0 39 34.892625244355855 38.0 34.0 40.0 23.0 41.0 40 34.6499367549542 38.0 34.0 40.0 22.0 41.0 41 34.51606807466749 38.0 34.0 40.0 22.0 41.0 42 34.393617999923336 38.0 33.0 40.0 21.0 41.0 43 34.35815861090881 38.0 33.0 40.0 21.0 41.0 44 34.16533021579976 38.0 33.0 40.0 20.0 41.0 45 34.08021771627889 37.0 33.0 40.0 20.0 41.0 46 33.99248725516501 37.0 33.0 40.0 20.0 41.0 47 33.84423320173253 37.0 33.0 40.0 20.0 41.0 48 33.7314155391161 37.0 33.0 40.0 20.0 41.0 49 33.56398482118901 37.0 33.0 40.0 19.0 41.0 50 33.37800605619226 36.0 32.0 40.0 18.0 41.0 51 31.365414542527503 35.0 28.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 22.0 10 28.0 11 23.0 12 14.0 13 16.0 14 15.0 15 21.0 16 37.0 17 76.0 18 164.0 19 285.0 20 480.0 21 767.0 22 1221.0 23 1781.0 24 2615.0 25 3690.0 26 4733.0 27 5338.0 28 5485.0 29 5373.0 30 5951.0 31 7123.0 32 8945.0 33 12041.0 34 17878.0 35 22084.0 36 24659.0 37 37314.0 38 45133.0 39 47559.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.428149794932736 19.1670819119169 21.191689984284565 19.213078308865803 2 36.62424776725823 23.491509831729847 23.343171451569628 16.541070949442293 3 31.02380313542106 22.94798574111695 30.392502587297326 15.635708536164666 4 27.07577906397332 24.515696270458815 30.20660048296217 18.201924182605698 5 23.868680286710877 27.871516731189388 29.270573805051935 18.989229177047797 6 25.209858561079386 32.52788531565027 28.66380466863429 13.598451454636054 7 56.662961401356895 27.968875771397904 11.00157154356242 4.366591283682778 8 76.78600176319522 5.817011000804937 13.43171451569627 3.965272720303576 9 70.19855111349611 7.955076852313235 15.620376403848365 6.22599563034229 10 40.71141093947641 24.36965771014604 21.952163747173138 12.966767603204415 11 29.608264019318487 25.064586607382424 27.798305799379047 17.528843573920042 12 28.18314232051823 21.441603741040286 31.88738548813676 18.487868450304727 13 24.839970868948598 21.34232818429223 33.150369887692136 20.66733105906704 14 19.949787266664114 24.276131703016596 33.52102418643873 22.25305684388056 15 19.275556748054736 24.757177354440568 35.73843382268389 20.228832074820804 16 23.388401241902717 24.854919697956994 32.855992947219136 18.900686112921157 17 23.649814097895668 24.3320939859711 30.853233163402198 21.164858752731035 18 23.330905745716585 24.943846065391543 31.270267162405613 20.45498102648626 19 25.174211353443983 25.99754685882939 29.15634941929549 19.67189236843114 20 25.740733642531332 25.263137720878532 30.302426309939058 18.693702326651078 21 25.83234313312124 25.002108168193494 30.743991720648552 18.421556978036723 22 23.913526773736056 23.61340028364445 31.058683736440646 21.41438920617885 23 23.487293495342865 24.09942887807122 31.535129748169727 20.87814787841619 24 22.86595883322473 23.864080647015985 31.722948369044424 21.547012150714863 25 23.48154394572425 25.062286787534976 29.691057533826516 21.765111732914256 26 22.125416842347352 25.710835984514546 29.96243627582506 22.201310897313046 27 22.11430104641803 25.78059718655372 30.69377898731266 21.41132277971559 28 21.710682663191385 25.8507416919008 30.823718808693318 21.614856836214496 29 23.04917781440454 24.99290888880371 30.999655027022882 20.958258269768866 30 23.35812028057802 24.29912990149105 31.40097359040209 20.941776227528845 31 23.29449193146537 25.060753574303344 30.09505922036107 21.549695273870213 32 24.7334125493503 25.9929472191345 28.86503890528575 20.408601326229444 33 24.10556173099774 25.18992678906819 29.74318678370194 20.96132469623213 34 23.09095787496646 24.80509026792901 30.814902832611445 21.28904902449308 35 22.995132047989575 25.41224270765457 29.957070029514355 21.635555214841503 36 24.386906359001877 26.561002721453487 28.28395109049791 20.768139829046724 37 23.877879566100653 26.6480125723485 28.63160719077006 20.84250067078079 38 23.262677756909042 26.242094369274405 28.50588370577638 21.98934416804017 39 23.47119475641075 25.142397178887656 28.562229292038786 22.82417877266281 40 24.762160297443366 24.426386599716356 29.974318678370192 20.837134424470083 41 22.613745256621563 25.51458469086588 29.803748706351335 22.067921346161217 42 23.163402200160988 25.330599103070263 29.1824140442332 22.32358465253555 43 22.793897811338113 25.642991299014913 29.18088083100157 22.382230058645405 44 22.765150063245045 25.44405688221089 28.742765150063242 23.04802790448082 45 22.204377323776303 25.140480662348114 28.547663766338303 24.107478247537276 46 22.271072099352217 26.271992027291198 28.336080340373336 23.12085553298325 47 22.086703208248686 25.748783011997396 29.91107363256545 22.25344014718847 48 22.15493119705623 24.693549005327917 30.553106673310594 22.598413124305264 49 21.92418260569589 25.18724366591284 29.988500900762773 22.900072827628502 50 20.791521330829084 25.079918739698726 31.032235808195026 23.096324121277167 51 21.196289623979457 24.265015907087278 30.041396757254013 24.497297711679252 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 127.0 1 348.0 2 569.0 3 4097.5 4 7626.0 5 5143.5 6 2661.0 7 2236.0 8 1811.0 9 1720.5 10 1630.0 11 1614.5 12 1599.0 13 1505.0 14 1411.0 15 1340.5 16 1270.0 17 1236.5 18 1203.0 19 1157.5 20 1112.0 21 1177.0 22 1242.0 23 1310.5 24 1379.0 25 1625.0 26 2093.5 27 2316.0 28 2905.0 29 3494.0 30 4063.5 31 4633.0 32 5077.5 33 5522.0 34 6390.5 35 7259.0 36 7586.0 37 7913.0 38 8420.5 39 8928.0 40 9694.5 41 10461.0 42 11346.5 43 12232.0 44 12901.5 45 13571.0 46 14256.5 47 14942.0 48 16678.0 49 18414.0 50 18158.0 51 17902.0 52 17525.5 53 17149.0 54 16024.5 55 14900.0 56 14470.0 57 14040.0 58 13827.0 59 13614.0 60 13165.0 61 12716.0 62 11795.5 63 10875.0 64 9301.5 65 7728.0 66 6641.0 67 5554.0 68 4826.0 69 4098.0 70 3367.0 71 2636.0 72 2194.5 73 1753.0 74 1456.0 75 917.0 76 675.0 77 542.0 78 409.0 79 310.5 80 212.0 81 170.0 82 128.0 83 98.5 84 69.0 85 51.5 86 34.0 87 25.0 88 16.0 89 13.5 90 11.0 91 9.5 92 8.0 93 6.5 94 5.0 95 3.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 260890.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.37986219343814 #Duplication Level Percentage of deduplicated Percentage of total 1 69.07697649457506 34.110115800414825 2 11.09362905330817 10.95603747754958 3 6.2091535566987 9.198214409030344 4 4.127267038100063 8.152155103076028 5 2.906559683911948 7.1762758324287566 6 2.0337921920920783 6.025702690535837 7 1.4631062817210783 5.057359059601836 8 1.0389133881942478 4.104111995195988 9 0.6683316515127988 2.970191236609344 >10 1.3474626178840532 8.429098701854908 >50 0.020884825201064074 0.7272502817964324 >100 0.012376192711741674 1.184837381372129 >500 7.735120444838546E-4 0.28990701884637193 >1k 7.735120444838546E-4 1.6187430116876473 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4238 1.6244394189121851 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 759 0.29092721070182836 No Hit GAATCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTC 397 0.15217141323929625 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 382 0.14642186362068305 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 302 0.11575759898807926 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTT 281 0.10770822952202078 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.8330330790754726E-4 0.0 0.0 0.05557897964659435 0.0 2 3.8330330790754726E-4 0.0 0.0 0.2215493119705623 0.0 3 3.8330330790754726E-4 0.0 0.0 0.3875196442945303 0.0 4 3.8330330790754726E-4 0.0 0.0 0.6113687761125378 0.0 5 3.8330330790754726E-4 0.0 0.0 1.2580014565525701 0.0 6 3.8330330790754726E-4 0.0 0.0 1.7877266280808004 0.0 7 3.8330330790754726E-4 0.0 0.0 2.2013108973130437 0.0 8 3.8330330790754726E-4 0.0 0.0 2.7597838169343403 0.0 9 3.8330330790754726E-4 0.0 0.0 3.1101230403618385 0.0 10 3.8330330790754726E-4 0.0 0.0 3.728391276016712 0.0 11 3.8330330790754726E-4 0.0 0.0 4.230518609375599 0.0 12 3.8330330790754726E-4 0.0 0.0 4.705814711180958 0.0 13 3.8330330790754726E-4 0.0 0.0 4.927747326459428 0.0 14 3.8330330790754726E-4 0.0 0.0 5.06650312392196 0.0 15 3.8330330790754726E-4 0.0 0.0 5.203725708152861 0.0 16 3.8330330790754726E-4 0.0 0.0 5.415692437425735 0.0 17 3.8330330790754726E-4 0.0 0.0 5.654107094944229 0.0 18 3.8330330790754726E-4 0.0 0.0 5.927019050174403 0.0 19 3.8330330790754726E-4 0.0 0.0 6.091072865958833 0.0 20 3.8330330790754726E-4 0.0 0.0 6.268542297520027 0.0 21 3.8330330790754726E-4 0.0 0.0 6.462110468013339 0.0 22 3.8330330790754726E-4 0.0 0.0 6.684426386599716 0.0 23 3.8330330790754726E-4 0.0 0.0 6.89332668940933 0.0 24 3.8330330790754726E-4 0.0 0.0 7.077312277204952 0.0 25 3.8330330790754726E-4 0.0 0.0 7.236383149986584 0.0 26 3.8330330790754726E-4 0.0 0.0 7.407336425313351 0.0 27 3.8330330790754726E-4 0.0 0.0 7.5775230940243015 0.0 28 3.8330330790754726E-4 0.0 0.0 7.7442600329640845 0.0 29 3.8330330790754726E-4 0.0 0.0 7.9244125876806315 0.0 30 3.8330330790754726E-4 0.0 0.0 8.159760818735865 0.0 31 3.8330330790754726E-4 0.0 0.0 8.351795775997546 0.0 32 3.8330330790754726E-4 0.0 0.0 8.542680823335505 0.0 33 3.8330330790754726E-4 0.0 0.0 8.753114339376749 0.0 34 3.8330330790754726E-4 0.0 0.0 8.965081068649623 0.0 35 3.8330330790754726E-4 0.0 0.0 9.180880831001572 0.0 36 3.8330330790754726E-4 0.0 0.0 9.408946299206562 0.0 37 3.8330330790754726E-4 0.0 0.0 9.617846602016176 0.0 38 3.8330330790754726E-4 0.0 0.0 9.870826785235156 0.0 39 3.8330330790754726E-4 0.0 0.0 10.220399402046839 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATGGGC 20 7.023252E-4 45.0 4 GTATACG 20 7.023252E-4 45.0 1 TTACGGG 45 3.8198777E-10 45.0 3 TTAATCG 30 2.1590295E-6 44.999996 20 CGTTTTA 205 0.0 42.80488 1 CGTTTTT 1450 0.0 42.672413 1 CGAATAT 70 0.0 41.785713 14 ACGGGAC 40 3.4445293E-7 39.375 5 GCTACGA 75 0.0 39.0 10 AACGTCT 35 6.229735E-6 38.571426 33 ATAGCGG 35 6.229735E-6 38.571426 2 TAACGTC 35 6.229735E-6 38.571426 32 ACGTCAT 35 6.229735E-6 38.571426 35 AGCTAAT 35 6.229735E-6 38.571426 40 TAATCGT 35 6.229735E-6 38.571426 21 TGCGACG 30 1.13750415E-4 37.499996 1 GGATGAC 165 0.0 36.81818 8 GCATATC 55 2.732122E-9 36.81818 28 TACGAAT 80 0.0 36.5625 12 AGATCAC 25 0.00210413 36.0 37 >>END_MODULE