##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551161_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 112313 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.974161495107424 33.0 31.0 34.0 30.0 34.0 2 32.10058497235405 33.0 31.0 34.0 30.0 34.0 3 32.008093453117624 33.0 31.0 34.0 30.0 34.0 4 35.76358925502836 37.0 35.0 37.0 35.0 37.0 5 35.81694906199638 37.0 35.0 37.0 35.0 37.0 6 35.79597197118766 37.0 35.0 37.0 35.0 37.0 7 26.774362718474265 35.0 10.0 37.0 0.0 37.0 8 31.08791502319411 35.0 19.0 37.0 17.0 37.0 9 35.83925280243605 39.0 32.0 39.0 32.0 39.0 10 36.65801821694728 38.0 35.0 39.0 33.0 39.0 11 37.02040725472563 39.0 37.0 39.0 34.0 39.0 12 37.02765485740743 39.0 37.0 39.0 34.0 39.0 13 36.92445220054669 39.0 37.0 39.0 33.0 39.0 14 38.11563220642312 40.0 37.0 41.0 33.0 41.0 15 38.15398929776607 40.0 37.0 41.0 33.0 41.0 16 38.115097985095225 40.0 37.0 41.0 33.0 41.0 17 38.00135336069734 40.0 37.0 41.0 33.0 41.0 18 37.91342943381443 40.0 36.0 41.0 33.0 41.0 19 37.811909574136564 40.0 36.0 41.0 33.0 41.0 20 37.89320025286476 40.0 36.0 41.0 33.0 41.0 21 37.84150543570201 40.0 36.0 41.0 33.0 41.0 22 37.84455940095982 40.0 36.0 41.0 33.0 41.0 23 37.8076001887582 40.0 36.0 41.0 33.0 41.0 24 37.749263219751946 40.0 36.0 41.0 33.0 41.0 25 37.67289628092919 39.0 36.0 41.0 33.0 41.0 26 37.52061649141239 39.0 36.0 41.0 33.0 41.0 27 37.40036327050297 39.0 35.0 41.0 33.0 41.0 28 37.39121027841835 39.0 36.0 41.0 33.0 41.0 29 37.34978141444 39.0 36.0 41.0 32.0 41.0 30 37.25467221069689 39.0 35.0 41.0 32.0 41.0 31 37.08895675478351 39.0 35.0 41.0 32.0 41.0 32 36.99298389322696 39.0 35.0 41.0 31.0 41.0 33 36.898177414902996 39.0 35.0 41.0 31.0 41.0 34 36.67514891419515 39.0 35.0 41.0 30.0 41.0 35 36.65685183371471 39.0 35.0 41.0 31.0 41.0 36 36.44036754427359 39.0 35.0 41.0 30.0 41.0 37 36.36724154817341 39.0 35.0 40.0 30.0 41.0 38 36.24164611398503 39.0 35.0 40.0 30.0 41.0 39 36.0725472563283 39.0 35.0 40.0 30.0 41.0 40 35.84528059975248 38.0 35.0 40.0 28.0 41.0 41 35.7535993161967 38.0 35.0 40.0 28.0 41.0 42 35.72135015536937 38.0 35.0 40.0 28.0 41.0 43 35.687311353093584 38.0 35.0 40.0 28.0 41.0 44 35.42453678559027 38.0 34.0 40.0 27.0 41.0 45 35.28165929144445 38.0 34.0 40.0 26.0 41.0 46 35.008707807644704 38.0 34.0 40.0 24.0 41.0 47 34.798064338055255 38.0 34.0 40.0 24.0 41.0 48 34.738721252214795 38.0 34.0 40.0 23.0 41.0 49 34.58051160595835 37.0 34.0 40.0 23.0 41.0 50 34.40200154924185 37.0 33.0 40.0 23.0 41.0 51 32.176114964429765 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 13.0 11 7.0 12 7.0 13 3.0 14 8.0 15 7.0 16 9.0 17 17.0 18 31.0 19 82.0 20 132.0 21 191.0 22 298.0 23 435.0 24 664.0 25 850.0 26 1165.0 27 1385.0 28 1767.0 29 1936.0 30 2476.0 31 3163.0 32 3936.0 33 5386.0 34 8380.0 35 10413.0 36 10914.0 37 16602.0 38 20658.0 39 21360.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.15149626490255 19.722561057045933 22.980420788332605 12.14552188971891 2 31.658846260005518 26.770721109755772 24.16728250514188 17.40315012509683 3 32.75845182659175 25.850079688014745 25.44941369209263 15.942054793300864 4 29.258411759992164 24.279468984000072 27.68245884269853 18.779660413309234 5 26.608673973627273 28.628030593074712 23.709632900910847 21.05366253238717 6 25.836724154817343 36.42499087371898 23.953593973983423 13.784690997480256 7 58.063625760152426 28.504269318778768 8.72561502230374 4.706489898765058 8 77.25285585818204 7.695458228344003 9.953433707585052 5.0982522058889 9 70.54926856196522 8.640139609840357 11.677187858929955 9.133403969264467 10 42.191019739478065 24.570619607703474 18.765414511232002 14.47294614158646 11 32.830571705857736 24.916973101956142 24.286591935038686 17.965863257147436 12 32.031020451773166 21.43385004407326 27.98785536847916 18.54727413567441 13 25.260655489569327 24.664108340085296 29.48901729986734 20.58621887047804 14 20.487387924817252 28.283457836581693 28.480229359023447 22.748924879577608 15 19.889950406453394 25.591872712864937 35.38593039096097 19.132246489720693 16 22.19422506744544 24.96594339034662 31.316054241272155 21.52377730093578 17 22.052656415552963 24.460213866604935 29.082118721786436 24.405010996055665 18 22.842413611959433 25.887475180967474 29.137321592335702 22.132789614737387 19 24.49048640851905 27.017353289467827 27.012011076188863 21.480149225824256 20 27.232822558385937 25.829601203778722 27.93443323568955 19.00314300214579 21 24.915192364196486 27.68245884269853 27.856971143144605 19.54537764996038 22 22.098955597303963 25.224150365496424 28.106274429496143 24.570619607703474 23 23.78442388681631 26.931877877004446 28.474887145744482 20.808811090434766 24 24.540347065789355 23.833394175206788 28.01278569711431 23.613473061889543 25 21.869240426308618 27.327201659647592 27.361926045960843 23.441631868082947 26 20.53991968872704 28.90849679022019 27.04851620026177 23.503067320791004 27 21.403577502159145 29.21300294712099 26.670999795215156 22.712419755504705 28 19.35483870967742 29.430252953798757 29.165813396490165 22.049094940033655 29 23.14691976886024 27.779509050599664 27.000436280751117 22.073134899788982 30 22.270796791110556 28.29325189425979 27.76259204188295 21.673359272746698 31 24.102285576914515 27.735880975488147 25.977402437829994 22.184431009767348 32 27.156250834720826 28.270992672264118 24.1414618076269 20.431294685388156 33 25.095046877921522 26.199104288906895 25.136003846393564 23.569844986778023 34 23.058773249757376 27.060981364579344 28.493584892220845 21.386660493442434 35 22.066902317630195 27.035160667064368 25.9346647315983 24.963272283707138 36 22.22983982263852 30.31260851370723 25.465440331929518 21.992111331724733 37 23.303624691709775 30.071318547274135 27.245287722703516 19.37976903831257 38 23.110414644787337 28.328866649452866 24.560825550025374 23.99989315573442 39 25.379964919466136 25.20367188126041 26.877565375335 22.53879782393846 40 25.648856321173863 24.007016106773037 27.724306180050394 22.619821392002706 41 19.41271268686617 26.63538504002208 28.130314389251467 25.821587883860282 42 21.030512941511667 25.56249053983065 27.56849162608069 25.838504892576996 43 23.177192310774352 25.55180611327273 25.547354268873594 25.72364730707932 44 22.358052941333597 26.825033611425216 26.654973155378276 24.16194029186292 45 22.30819228406329 25.878571492169204 26.27834711921149 25.53488910455602 46 23.80134089553302 28.046619714547738 25.0941565090417 23.057882880877546 47 20.44465021858556 25.714743618281055 30.336648473462557 23.50395768967083 48 22.24675683135523 24.935670848432505 28.626249855315056 24.19132246489721 49 21.57808980260522 24.083587830438148 29.78640050572952 24.551921861227104 50 20.206031358791947 24.330220010150207 29.411555207322394 26.052193423735453 51 20.163293652560256 24.80122514757864 27.43493629410665 27.600544905754454 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 52.0 1 174.0 2 296.0 3 431.5 4 567.0 5 408.0 6 249.0 7 236.5 8 224.0 9 226.0 10 228.0 11 243.0 12 258.0 13 239.0 14 220.0 15 248.0 16 276.0 17 258.0 18 240.0 19 257.0 20 274.0 21 348.0 22 422.0 23 496.0 24 570.0 25 737.5 26 917.0 27 929.0 28 1152.5 29 1376.0 30 1727.5 31 2079.0 32 2384.5 33 2690.0 34 2958.5 35 3227.0 36 3343.0 37 3459.0 38 3721.5 39 3984.0 40 4515.0 41 5046.0 42 5667.5 43 6289.0 44 7010.0 45 7731.0 46 9632.5 47 11534.0 48 10595.5 49 9657.0 50 9327.5 51 8998.0 52 8080.5 53 7163.0 54 6483.0 55 5803.0 56 5721.0 57 5639.0 58 5476.0 59 5313.0 60 5015.0 61 4717.0 62 4339.5 63 3962.0 64 3329.0 65 2696.0 66 2288.5 67 1881.0 68 1509.5 69 1138.0 70 984.5 71 831.0 72 716.0 73 601.0 74 474.5 75 283.0 76 218.0 77 170.5 78 123.0 79 82.0 80 41.0 81 34.0 82 27.0 83 21.5 84 16.0 85 12.0 86 8.0 87 6.5 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 112313.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.282807867299425 #Duplication Level Percentage of deduplicated Percentage of total 1 70.57505736120395 34.7813699215585 2 10.388249534787086 10.239242118009491 3 5.728893786923452 8.470079153793417 4 3.716283355314267 7.325955143215834 5 2.567252624162165 6.326070891170212 6 1.9150512185868367 5.662746075699162 7 1.365828982312876 4.71183211204402 8 1.0677313869668117 4.209664063821641 9 0.7967335730158444 3.5338740840330147 >10 1.8445917869595854 11.597054659745533 >50 0.0144532167440516 0.5208657946987436 >100 0.016259868837058048 1.431713158761675 >500 0.0036133041860129 1.1895328234487548 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCG 697 0.6205871092393579 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGC 639 0.568945714209397 No Hit GAATCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCGTCTTC 435 0.38731046272470687 No Hit GCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCGTCTTCTGC 216 0.19231967804261305 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 207 0.18430635812417084 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCG 144 0.12821311869507537 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGC 135 0.12019979877663316 No Hit CTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCGTCTTCTGCT 129 0.11485758549767168 TruSeq Adapter, Index 22 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCGTCT 117 0.10417315893974874 No Hit CCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCGTCTTCTGC 115 0.10239242118009492 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17095082492676716 0.0 2 0.0 0.0 0.0 0.8342756403978168 0.0 3 0.0 0.0 0.0 1.0631004425133332 0.0 4 0.0 0.0 0.0 1.4094539367660022 0.0 5 0.0 0.0 0.0 2.7280902477896594 0.0 6 0.0 0.0 0.0 3.195533909698788 0.0 7 8.903688798269123E-4 0.0 0.0 3.69681158904134 0.0 8 8.903688798269123E-4 0.0 0.0 4.487459154327638 0.0 9 8.903688798269123E-4 0.0 0.0 4.77237719587225 0.0 10 8.903688798269123E-4 0.0 0.0 6.417778885792384 0.0 11 8.903688798269123E-4 0.0 0.0 7.455058630790736 0.0 12 8.903688798269123E-4 0.0 0.0 9.087995156393294 0.0 13 8.903688798269123E-4 0.0 0.0 9.509139636551422 0.0 14 8.903688798269123E-4 0.0 0.0 9.705020790113345 0.0 15 8.903688798269123E-4 0.0 0.0 10.105686786035454 0.0 16 8.903688798269123E-4 0.0 0.0 10.731616108553775 0.0 17 8.903688798269123E-4 0.0 0.0 11.405625350582746 0.0 18 8.903688798269123E-4 0.0 0.0 12.150864102997872 0.0 19 8.903688798269123E-4 0.0 0.0 12.614746289387693 0.0 20 8.903688798269123E-4 0.0 0.0 13.037671507305477 0.0 21 8.903688798269123E-4 0.0 0.0 13.591480950557816 0.0 22 8.903688798269123E-4 0.0 0.0 14.095429736539849 0.0 23 8.903688798269123E-4 0.0 0.0 14.593145940363092 0.0 24 8.903688798269123E-4 0.0 0.0 15.000934887323819 0.0 25 8.903688798269123E-4 0.0 0.0 15.377560923490602 0.0 26 8.903688798269123E-4 0.0 0.0 15.71857220446431 0.0 27 8.903688798269123E-4 0.0 0.0 16.09341750287144 0.0 28 8.903688798269123E-4 0.0 0.0 16.478947227836493 0.0 29 8.903688798269123E-4 0.0 0.0 16.829752566488295 0.0 30 8.903688798269123E-4 0.0 0.0 17.23754151344902 0.0 31 8.903688798269123E-4 0.0 0.0 17.615057918495634 0.0 32 8.903688798269123E-4 0.0 0.0 17.975657314825533 0.0 33 8.903688798269123E-4 0.0 0.0 18.33358560451595 0.0 34 8.903688798269123E-4 0.0 0.0 18.685281312047582 0.0 35 8.903688798269123E-4 0.0 0.0 19.06101697933454 0.0 36 8.903688798269123E-4 0.0 0.0 19.40113789142842 0.0 37 8.903688798269123E-4 0.0 0.0 19.783106140874164 0.0 38 8.903688798269123E-4 0.0 0.0 20.14192479944441 0.0 39 8.903688798269123E-4 0.0 0.0 20.526564155529638 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACCTC 20 7.0061E-4 45.0 37 TGAAACG 35 1.1988777E-7 45.0 4 CGACACC 20 7.0061E-4 45.0 35 TGCATTG 25 3.868289E-5 45.0 39 AAACGGC 35 1.1988777E-7 45.0 6 AACGGCT 25 3.868289E-5 45.0 7 TACGAAT 25 3.868289E-5 45.0 12 CCTCAAG 25 3.868289E-5 45.0 24 GCCTCAA 25 3.868289E-5 45.0 23 TGCTCCC 25 3.868289E-5 45.0 41 TGGGCTC 25 3.868289E-5 45.0 6 TGGGCGA 20 7.0061E-4 45.0 6 TGGGAGT 20 7.0061E-4 45.0 6 GACTATC 20 7.0061E-4 45.0 3 TACGGCT 80 0.0 42.1875 7 ACACCCA 50 1.0622898E-9 40.5 30 CATACGA 50 1.0622898E-9 40.5 18 ACATACG 50 1.0622898E-9 40.5 17 GTCACTT 40 3.4212098E-7 39.375 4 GAATGAA 120 0.0 39.374996 1 >>END_MODULE