##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551150_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 152468 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03053755542147 33.0 31.0 34.0 30.0 34.0 2 32.145007476978776 33.0 31.0 34.0 30.0 34.0 3 32.04724925886087 33.0 31.0 34.0 30.0 34.0 4 35.796908203688645 37.0 35.0 37.0 35.0 37.0 5 35.85812104835113 37.0 35.0 37.0 35.0 37.0 6 35.83295511189233 37.0 35.0 37.0 35.0 37.0 7 26.760795707951832 35.0 10.0 37.0 0.0 37.0 8 31.11571608468662 35.0 19.0 37.0 17.0 37.0 9 35.91257837710208 39.0 32.0 39.0 32.0 39.0 10 36.687783666080755 38.0 35.0 39.0 33.0 39.0 11 37.07941994385707 39.0 37.0 39.0 34.0 39.0 12 37.09990293045098 39.0 37.0 39.0 34.0 39.0 13 37.07581918828869 39.0 37.0 39.0 33.0 39.0 14 38.26301256657135 40.0 38.0 41.0 33.0 41.0 15 38.34249809796154 40.0 38.0 41.0 34.0 41.0 16 38.298383923183884 40.0 37.0 41.0 34.0 41.0 17 38.20739433848414 40.0 37.0 41.0 34.0 41.0 18 38.11589317102605 40.0 37.0 41.0 33.0 41.0 19 38.02881916205368 40.0 37.0 41.0 34.0 41.0 20 38.067673216674976 40.0 37.0 41.0 34.0 41.0 21 37.99412991578561 40.0 37.0 41.0 33.0 41.0 22 38.001797098407536 40.0 37.0 41.0 33.0 41.0 23 37.96470734842721 40.0 37.0 41.0 33.0 41.0 24 37.93571765878742 40.0 36.0 41.0 33.0 41.0 25 37.81308864810977 40.0 36.0 41.0 33.0 41.0 26 37.69261746727182 40.0 36.0 41.0 33.0 41.0 27 37.559428863761575 40.0 36.0 41.0 33.0 41.0 28 37.472486029855446 40.0 36.0 41.0 33.0 41.0 29 37.43250386966445 40.0 36.0 41.0 33.0 41.0 30 37.351450796232655 40.0 36.0 41.0 32.0 41.0 31 37.22386992680431 40.0 36.0 41.0 32.0 41.0 32 37.096859668914135 39.0 35.0 41.0 31.0 41.0 33 36.97638848807619 39.0 35.0 41.0 31.0 41.0 34 36.836201694781856 39.0 35.0 41.0 31.0 41.0 35 36.74794711021329 39.0 35.0 41.0 30.0 41.0 36 36.603805388671724 39.0 35.0 41.0 30.0 41.0 37 36.53852611695569 39.0 35.0 41.0 30.0 41.0 38 36.41930765800037 39.0 35.0 41.0 30.0 41.0 39 36.36340740352074 39.0 35.0 41.0 30.0 41.0 40 36.17350526012016 39.0 35.0 41.0 29.0 41.0 41 36.07252669412598 39.0 35.0 40.0 29.0 41.0 42 36.03807356297715 39.0 35.0 40.0 29.0 41.0 43 35.97526038250649 39.0 35.0 40.0 29.0 41.0 44 35.79712464254794 38.0 35.0 40.0 28.0 41.0 45 35.66034184222263 38.0 35.0 40.0 27.0 41.0 46 35.49292310517617 38.0 34.0 40.0 27.0 41.0 47 35.39197733294856 38.0 34.0 40.0 26.0 41.0 48 35.32279560301178 38.0 34.0 40.0 26.0 41.0 49 35.14748012697746 38.0 34.0 40.0 26.0 41.0 50 34.94257155599863 38.0 34.0 40.0 25.0 41.0 51 32.79280242411522 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 11.0 10 15.0 11 8.0 12 6.0 13 3.0 14 7.0 15 17.0 16 16.0 17 34.0 18 60.0 19 144.0 20 211.0 21 327.0 22 466.0 23 675.0 24 891.0 25 1206.0 26 1479.0 27 1764.0 28 2115.0 29 2449.0 30 2856.0 31 3783.0 32 4711.0 33 6743.0 34 10226.0 35 12799.0 36 14127.0 37 22488.0 38 29621.0 39 33198.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.655271925912324 19.78447936616208 23.793845265891857 11.766403442033738 2 31.762074664847706 24.68517984101582 25.557494031534482 17.99525146260199 3 32.59765983681822 24.61828055723168 25.747042002256208 17.03701760369389 4 29.33927119133195 25.371225437468848 26.003489256762073 19.286014114437126 5 25.182989217409556 30.61626046121153 24.197208594590343 20.00354172678857 6 26.51048088779285 36.03838182438282 23.777448382611432 13.673688905212897 7 60.09720072408636 28.623055329642945 6.798147808064643 4.48159613820605 8 80.75268253010468 6.891282105097463 8.033161056746334 4.322874308051525 9 73.91124695017972 9.661043628827032 10.22247291234882 6.205236508644437 10 41.34966025657843 28.655193220872576 16.949786184642022 13.045360337906969 11 32.83246320539392 27.70810924259517 22.580475903140332 16.878951648870583 12 32.048036309258336 23.968308103995593 26.877115197943173 17.106540388802895 13 25.693916100427632 25.32072303696513 27.54151690846604 21.443843954141197 14 19.832358265340925 29.33992706666317 27.36180706771257 23.46590760028334 15 20.10979353044573 28.120654825930686 32.98397040690506 18.785581236718524 16 22.69328646010966 26.384552824199176 31.647952357215942 19.27420835847522 17 22.055775638166697 25.960201484901752 27.54807566177821 24.435947215153345 18 23.473778104257942 28.01177952094866 26.730854999081778 21.783587375711626 19 26.692814229871185 28.52598578062282 24.51661988089304 20.264580108612957 20 28.733242385287404 25.965448487551484 26.325524044389642 18.975785082771466 21 26.074979667864735 27.637930582154947 26.290762651835138 19.996327098145183 22 24.277881260330037 26.299944906472177 26.13794369966157 23.28423013353622 23 24.220164231182935 27.550043287771857 27.403783088910462 20.826009392134743 24 23.963061101345858 25.18823622005929 28.043917412178292 22.80478526641656 25 23.389170186530944 27.05616916336543 25.936589972977934 23.61807067712569 26 22.228926725607998 29.309756801427184 25.920193089697513 22.54112338326731 27 22.60080803840806 29.404858724453657 26.47047249258861 21.523860744549676 28 21.03064249547446 29.656058976309787 27.805834666946506 21.50746386126925 29 23.425899205079098 27.384762704305167 27.57693417635176 21.61240391426398 30 23.715140226145813 26.49867513183094 27.430018102159142 22.356166539864102 31 23.631188183750034 28.27281790277304 25.704410105727106 22.391583807749825 32 25.125272188262453 28.64141983891702 25.605372930713333 20.627935042107197 33 24.68977096833434 28.748983393236614 25.699163103077368 20.862082535351682 34 23.172075451898102 28.522050528635518 27.864207571424828 20.441666448041556 35 23.246189364325627 26.825956922108247 27.109295065194004 22.818558648372118 36 22.520135372668364 30.178791615289768 26.227142744707088 21.073930267334784 37 23.44557546501561 29.56620405593305 27.114542067843743 19.8736784112076 38 22.94645433795944 27.34409843376971 27.138809455098773 22.570637773172074 39 24.14801794474906 26.46522548993887 27.81960804890207 21.56714851641 40 25.23677099456935 25.47485373980114 28.91819922869061 20.370176036938897 41 20.46068683264685 27.74155888448724 29.187763989820816 22.609990293045097 42 22.143007057218565 27.269984521342185 27.550043287771857 23.03696513366739 43 23.137969934674818 27.290972531941126 26.927617598446886 22.643439934937167 44 22.52800587664297 27.95340661647034 26.70921111315161 22.80937639373508 45 22.810032269066298 26.61410919012514 25.76278301020542 24.813075530603143 46 21.843272030852376 28.960831125219716 26.08678542382664 23.109111420101268 47 22.087257654065116 27.31589579452738 28.489912637405883 22.106933914001626 48 22.45454783954666 25.0885431697143 29.087415064144608 23.369493926594433 49 20.64695542671249 26.62985019807435 28.734554135949843 23.98864023926332 50 19.709709578403338 26.413411338772725 29.093973817456774 24.78290526536716 51 19.82645538735997 26.429152346721935 27.88453970669255 25.859852559225544 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 89.0 1 205.5 2 322.0 3 508.0 4 694.0 5 515.5 6 337.0 7 308.5 8 280.0 9 292.0 10 304.0 11 310.5 12 317.0 13 326.0 14 335.0 15 315.5 16 296.0 17 362.5 18 429.0 19 505.0 20 581.0 21 624.0 22 667.0 23 695.5 24 724.0 25 908.0 26 1369.5 27 1647.0 28 1993.5 29 2340.0 30 2637.5 31 2935.0 32 3535.5 33 4136.0 34 4699.0 35 5262.0 36 5199.5 37 5137.0 38 5783.0 39 6429.0 40 7187.0 41 7945.0 42 8984.5 43 10024.0 44 11112.5 45 12201.0 46 12111.5 47 12022.0 48 11599.0 49 11176.0 50 10370.5 51 9565.0 52 8992.0 53 8419.0 54 7928.5 55 7438.0 56 7421.0 57 7404.0 58 7547.0 59 7690.0 60 7590.5 61 7491.0 62 6804.0 63 6117.0 64 5031.5 65 3946.0 66 3142.5 67 2339.0 68 2040.0 69 1741.0 70 1386.0 71 1031.0 72 844.0 73 657.0 74 501.0 75 290.0 76 235.0 77 191.5 78 148.0 79 116.5 80 85.0 81 68.5 82 52.0 83 36.5 84 21.0 85 14.5 86 8.0 87 6.5 88 5.0 89 5.5 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 152468.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.725660466458535 #Duplication Level Percentage of deduplicated Percentage of total 1 68.07234964212458 31.126531468898396 2 10.346113573446935 9.461657528137051 3 5.96411205301433 8.181388881601386 4 3.994721516990117 7.306451189757851 5 2.8515283216432143 6.5194007922974 6 2.1587274265960956 5.922554240889891 7 1.5835449029648434 5.068604559645302 8 1.2608115667627695 4.612115329118241 9 1.0126654904829524 4.167431854553087 >10 2.722434987162385 16.056483983524412 >50 0.02008118536368461 0.5988141774011596 >100 0.012909333448082963 0.9785659941758271 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 274 0.1797098407534696 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 258 0.1692158354539969 No Hit GCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCTGC 154 0.10100480100742452 Illumina PCR Primer Index 5 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08198441640213028 0.0 2 0.0 0.0 0.0 0.41516908466038777 0.0 3 0.0 0.0 0.0 0.5496235275598814 0.0 4 0.0 0.0 0.0 0.7208069890075295 0.0 5 0.0 0.0 0.0 1.2638717632552405 0.0 6 0.0 0.0 0.0 1.5760684209145526 0.0 7 0.0 0.0 0.0 1.8889209539050817 0.0 8 0.0 0.0 0.0 2.4418238581210483 0.0 9 0.0 0.0 0.0 2.6320277041739906 0.0 10 0.0 0.0 0.0 3.2492063908492272 0.0 11 0.0 0.0 0.0 3.9372196132959045 0.0 12 0.0 0.0 0.0 4.625888711073799 0.0 13 0.0 0.0 0.0 4.88495946690453 0.0 14 0.0 0.0 0.0 5.026628538447412 0.0 15 0.0 0.0 0.0 5.250282026392424 0.0 16 0.0 0.0 0.0 5.700212503607315 0.0 17 0.0 0.0 0.0 6.152110606815857 0.0 18 0.0 0.0 0.0 6.72993677361807 0.0 19 0.0 0.0 0.0 7.037542303958864 0.0 20 0.0 0.0 0.0 7.388435606159981 0.0 21 0.0 0.0 0.0 7.785896056877509 0.0 22 0.0 0.0 0.0 8.179421255607734 0.0 23 0.0 0.0 0.0 8.594590340268121 0.0 24 0.0 0.0 0.0 8.911378125245953 0.0 25 0.0 0.0 0.0 9.192748642338064 0.0 26 0.0 0.0 0.0 9.468872156780439 0.0 27 0.0 0.0 0.0 9.733189915260906 0.0 28 0.0 0.0 0.0 10.053257076894823 0.0 29 0.0 0.0 0.0 10.362830233229268 0.0 30 0.0 0.0 0.0 10.708476532780649 0.0 31 0.0 0.0 0.0 11.046252328357426 0.0 32 0.0 0.0 0.0 11.342052102736313 0.0 33 0.0 0.0 0.0 11.671957394338484 0.0 34 0.0 0.0 0.0 12.007109688590393 0.0 35 0.0 0.0 0.0 12.33570322953013 0.0 36 0.0 0.0 0.0 12.680037778419079 0.0 37 0.0 0.0 0.0 13.041425085919668 0.0 38 0.0 0.0 0.0 13.38707138547105 0.0 39 0.0 0.0 0.0 13.760920324264763 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGA 45 3.8016879E-10 45.000004 4 ATGCCGC 25 3.8748498E-5 45.000004 41 ACAACGA 20 7.014027E-4 45.0 13 CATTCTA 20 7.014027E-4 45.0 45 CAGGGTA 40 6.7484507E-9 45.0 5 GAGCGAC 20 7.014027E-4 45.0 18 GCGGGTC 20 7.014027E-4 45.0 5 CGGGAAC 20 7.014027E-4 45.0 6 TTCGGGA 35 1.2026794E-7 45.0 4 GGACCCA 20 7.014027E-4 45.0 8 ATTTGGA 20 7.014027E-4 45.0 16 TGCGGGA 80 0.0 42.1875 4 CATACGA 65 0.0 41.53846 18 ACATACG 65 0.0 41.53846 17 CAAGCGA 45 1.909575E-8 40.000004 15 CGAGATA 45 1.909575E-8 40.000004 19 TCGACAC 40 3.4319783E-7 39.375 34 GTTATGG 40 3.4319783E-7 39.375 2 CGTTTTT 180 0.0 38.750004 1 CCCTAGC 35 6.2127074E-6 38.571426 21 >>END_MODULE