##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551147_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 131295 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98259644312426 33.0 31.0 34.0 30.0 34.0 2 32.10763547736014 33.0 31.0 34.0 30.0 34.0 3 31.98910849613466 33.0 31.0 34.0 30.0 34.0 4 35.75074450664534 37.0 35.0 37.0 35.0 37.0 5 35.81904870710994 37.0 35.0 37.0 35.0 37.0 6 35.787120606268324 37.0 35.0 37.0 35.0 37.0 7 26.804821204158575 35.0 10.0 37.0 0.0 37.0 8 31.134293004303288 35.0 19.0 37.0 17.0 37.0 9 35.85002475341788 39.0 32.0 39.0 32.0 39.0 10 36.64314711146655 38.0 35.0 39.0 33.0 39.0 11 37.01572032446018 39.0 37.0 39.0 34.0 39.0 12 37.03308579915458 39.0 37.0 39.0 34.0 39.0 13 36.977927567691076 39.0 37.0 39.0 33.0 39.0 14 38.15431661525572 40.0 37.0 41.0 33.0 41.0 15 38.256453025629305 40.0 37.0 41.0 33.0 41.0 16 38.192033207662135 40.0 37.0 41.0 34.0 41.0 17 38.071571651624204 40.0 37.0 41.0 33.0 41.0 18 37.984873757568835 40.0 37.0 41.0 33.0 41.0 19 37.887215811721696 40.0 37.0 41.0 33.0 41.0 20 37.943013823831826 40.0 36.0 41.0 33.0 41.0 21 37.90444419056323 40.0 36.0 41.0 33.0 41.0 22 37.88616474351651 40.0 36.0 41.0 33.0 41.0 23 37.87186107620244 40.0 36.0 41.0 33.0 41.0 24 37.809642408317146 40.0 36.0 41.0 33.0 41.0 25 37.677497239041855 40.0 36.0 41.0 33.0 41.0 26 37.56003655889409 40.0 36.0 41.0 33.0 41.0 27 37.436437031113144 39.0 36.0 41.0 33.0 41.0 28 37.33620472980692 39.0 36.0 41.0 32.0 41.0 29 37.2564301763205 39.0 36.0 41.0 32.0 41.0 30 37.20992421645912 39.0 36.0 41.0 32.0 41.0 31 37.02773144445714 39.0 35.0 41.0 31.0 41.0 32 36.92123081610114 39.0 35.0 41.0 31.0 41.0 33 36.82150119958871 39.0 35.0 41.0 31.0 41.0 34 36.66646863932366 39.0 35.0 41.0 30.0 41.0 35 36.61003084656689 39.0 35.0 41.0 30.0 41.0 36 36.47874633459004 39.0 35.0 41.0 30.0 41.0 37 36.40447084809018 39.0 35.0 41.0 30.0 41.0 38 36.24551582314635 39.0 35.0 41.0 30.0 41.0 39 36.21437221524049 39.0 35.0 40.0 30.0 41.0 40 36.02293308960737 39.0 35.0 40.0 29.0 41.0 41 35.96397425644541 39.0 35.0 40.0 29.0 41.0 42 35.92073574774363 38.0 35.0 40.0 29.0 41.0 43 35.85735176510911 38.0 35.0 40.0 29.0 41.0 44 35.69355268669789 38.0 35.0 40.0 28.0 41.0 45 35.57200198027343 38.0 35.0 40.0 27.0 41.0 46 35.40917780570471 38.0 34.0 40.0 26.0 41.0 47 35.28047526562322 38.0 34.0 40.0 26.0 41.0 48 35.181682470771925 38.0 34.0 40.0 26.0 41.0 49 34.97560455462889 38.0 34.0 40.0 25.0 41.0 50 34.77471343158536 38.0 34.0 40.0 24.0 41.0 51 32.56830039224647 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 13.0 10 12.0 11 3.0 12 3.0 13 4.0 14 6.0 15 9.0 16 17.0 17 44.0 18 55.0 19 125.0 20 204.0 21 295.0 22 434.0 23 570.0 24 836.0 25 1065.0 26 1258.0 27 1492.0 28 1819.0 29 2160.0 30 2626.0 31 3351.0 32 4286.0 33 6133.0 34 9287.0 35 11830.0 36 12352.0 37 19500.0 38 25102.0 39 26394.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.65813625804486 20.732701169122965 23.891237290071977 12.717925282760195 2 32.072051487109185 24.559960394531398 25.773258692257894 17.594729426101527 3 32.453634944209604 24.796069918884953 25.954529875471266 16.795765261434177 4 29.583000114246545 25.123576678472144 25.78392170303515 19.509501504246163 5 25.160135572565594 30.17175063787654 24.480749457328915 20.18736433222895 6 26.039072318062377 35.127004074793405 24.687916523858487 14.146007083285731 7 59.77074526828897 28.45272097185727 6.987318633611333 4.789215126242431 8 80.21402185917209 6.169313378270307 8.95464412201531 4.66202064054229 9 72.81236909250161 9.058989298907042 11.545755740888838 6.582885867702502 10 41.37629003389314 26.119044898891808 18.411973037815606 14.092692029399444 11 31.124566815187173 26.46102288739099 24.64221790624167 17.772192391180166 12 29.197608439011386 23.423588103126548 28.928748238699114 18.45005521916295 13 24.92250276095815 25.11367531132183 29.58452340150044 20.379298526219582 14 20.0 28.85334551963136 29.779504169998855 21.36715031036978 15 19.683917894817014 26.652957081381622 34.228264594996 19.43486042880536 16 22.5857801134849 25.697094329563196 31.657717354050043 20.059408202901864 17 21.540805057313683 25.205072546555467 28.903613999009863 24.350508397120986 18 22.966601926958376 26.74587760386915 28.659126394759895 21.628394074412583 19 24.971247953082752 26.593548878479762 26.879926882211812 21.555276286225673 20 25.946913439201797 26.090864084694772 27.286644579001486 20.675577897101945 21 24.746563083133402 26.249285959099737 28.63551544232454 20.368635515442325 22 22.55836094291481 25.02151643246125 28.493849727712405 23.926272896911534 23 22.54084313949503 25.649110781065538 28.99272630336266 22.817319776076776 24 23.034388209756653 24.301001561369436 29.890704139533113 22.773906089340798 25 22.156213107886817 26.71084199702959 27.73220610076545 23.400738794318137 26 20.55219162953654 28.878479759320612 27.65071023268213 22.918618378460717 27 21.712174873376746 27.99801972656994 28.17015118625995 22.119654213793368 28 20.662629955443848 28.04752656232149 29.384972771240335 21.904870710994327 29 21.444837960318367 28.36741688563921 28.27678129403252 21.9109638600099 30 22.801325259910886 26.312502380136333 28.499181233101034 22.386991126851747 31 23.521078487375757 27.390228112266268 26.675806390190033 22.412887010167942 32 24.15781255950341 28.153395026467116 26.3330667580639 21.355725655965575 33 24.29262348147302 26.140370920446323 27.07033778894855 22.496667809132106 34 23.073993678357894 26.351346205110627 28.811455120149283 21.763204996382193 35 21.32906812902243 26.208157203244603 27.915000571232717 24.547774096500248 36 23.349708671312694 27.378803457862066 27.90205262957462 21.36943524125062 37 22.617007502189725 27.7329677443924 28.52050725465555 21.12951749876233 38 22.68784035949579 27.480102060246008 26.42598728055143 23.406070299706766 39 23.97349480178225 25.70699569671351 27.72154308998819 22.59796641151605 40 23.24993335618264 25.217258844586617 29.161049544917933 22.371758254312805 41 20.336646483110552 25.76411896873453 28.884572908336185 25.01466163981873 42 21.677900910164134 25.88674359267299 28.695685288853344 23.739670208309533 43 23.132640237632813 25.927872348528126 28.084085456414943 22.85540195742412 44 22.279599375452225 26.39247496096576 26.99417342625385 24.333752237328156 45 21.664952968506036 26.497581781484442 27.14802543889714 24.68943981111238 46 22.89348413877147 27.163258311436078 27.353669218172815 22.589588331619634 47 21.653528314101834 25.54857382230854 29.571575459842343 23.226322403747286 48 21.29631745306371 24.913363037434785 29.533493278494994 24.256826231006514 49 21.387714688297347 25.06721505007807 30.209832819223887 23.3352374424007 50 20.38463003160821 24.75189458852203 30.249438287825125 24.614037092044633 51 20.07768764994859 25.163943790700333 28.36437031113142 26.393998248219656 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 79.0 1 206.0 2 333.0 3 511.5 4 690.0 5 508.0 6 326.0 7 316.5 8 307.0 9 296.5 10 286.0 11 285.5 12 285.0 13 305.5 14 326.0 15 353.0 16 380.0 17 362.5 18 345.0 19 405.5 20 466.0 21 587.0 22 708.0 23 719.0 24 730.0 25 864.0 26 1314.0 27 1630.0 28 1823.5 29 2017.0 30 2396.0 31 2775.0 32 3054.5 33 3334.0 34 3644.5 35 3955.0 36 4161.5 37 4368.0 38 4832.0 39 5296.0 40 5936.5 41 6577.0 42 7297.0 43 8017.0 44 8622.0 45 9227.0 46 10114.5 47 11002.0 48 11120.5 49 11239.0 50 10676.5 51 10114.0 52 8839.0 53 7564.0 54 6961.0 55 6358.0 56 6164.0 57 5970.0 58 5913.5 59 5857.0 60 5582.0 61 5307.0 62 4841.5 63 4376.0 64 3771.0 65 3166.0 66 2693.5 67 2221.0 68 1920.0 69 1619.0 70 1371.5 71 1124.0 72 925.0 73 726.0 74 598.0 75 401.5 76 333.0 77 255.5 78 178.0 79 136.5 80 95.0 81 74.0 82 53.0 83 41.5 84 30.0 85 18.5 86 7.0 87 11.0 88 15.0 89 13.5 90 12.0 91 6.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 131295.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.113065996420275 #Duplication Level Percentage of deduplicated Percentage of total 1 70.461982227874 34.60603983396169 2 10.298838453545896 10.11615065310941 3 5.5099793744087595 8.118359419627556 4 3.6443713847060466 7.159450093301345 5 2.648760138331033 6.5044365741269665 6 1.8966239163810616 5.588940934536731 7 1.4236310345362344 4.894321946761111 8 1.093311415411814 4.295670055980807 9 0.8591411689902765 3.7975551239575003 >10 2.1400989408061037 13.545831905251532 >50 0.010855574337422265 0.3853916752351575 >100 0.012406370671339732 0.9878517841501961 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 295 0.2246848699493507 No Hit GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC 212 0.16146844891275372 No Hit GAATCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC 188 0.14318900186602687 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCG 150 0.11424654404204272 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11729311854983053 0.0 2 0.0 0.0 0.0 0.5933203853916752 0.0 3 0.0 0.0 0.0 0.8187668989679728 0.0 4 0.0 0.0 0.0 1.083818881145512 0.0 5 0.0 0.0 0.0 1.9444761795955672 0.0 6 0.0 0.0 0.0 2.4456376861266613 0.0 7 0.0 0.0 0.0 2.875204691724742 0.0 8 0.0 0.0 0.0 3.650557903956739 0.0 9 0.0 0.0 0.0 3.9475989184660496 0.0 10 0.0 0.0 0.0 4.732853497848357 0.0 11 0.0 0.0 0.0 5.7237518565063406 0.0 12 0.0 0.0 0.0 6.6255379108115315 0.0 13 0.0 0.0 0.0 7.132792566358201 0.0 14 0.0 0.0 0.0 7.371187021592597 0.0 15 0.0 0.0 0.0 7.657565025324651 0.0 16 0.0 0.0 0.0 8.294299097452303 0.0 17 0.0 0.0 0.0 8.944742754864999 0.0 18 0.0 0.0 0.0 9.70105487642332 0.0 19 0.0 0.0 0.0 10.127575307513615 0.0 20 0.0 0.0 0.0 10.573136829277582 0.0 21 0.0 0.0 0.0 11.111618873529077 0.0 22 0.0 0.0 0.0 11.670665295708138 0.0 23 0.0 0.0 0.0 12.171065158612285 0.0 24 0.0 0.0 0.0 12.550363684831867 0.0 25 0.0 0.0 0.0 12.903004684108305 0.0 26 0.0 0.0 0.0 13.243459385353592 0.0 27 0.0 0.0 0.0 13.547355192505426 0.0 28 0.0 0.0 0.0 13.906089340797442 0.0 29 0.0 0.0 0.0 14.318900186602688 0.0 30 0.0 0.0 0.0 14.726379527019308 0.0 31 0.0 0.0 0.0 15.117864351270041 0.0 32 0.0 0.0 0.0 15.509349175520773 0.0 33 0.0 0.0 0.0 15.916066872310447 0.0 34 0.0 0.0 0.0 16.30983662744202 0.0 35 0.0 0.0 0.0 16.71960089873948 0.0 36 0.0 0.0 0.0 17.110324079363266 0.0 37 0.0 0.0 0.0 17.490384249209797 0.0 38 0.0 0.0 0.0 17.917666323927033 0.0 39 0.0 0.0 0.0 18.350279904032902 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCGG 25 3.8718856E-5 45.0 27 ATAGGAG 20 7.0104457E-4 45.0 5 CTATAGG 20 7.0104457E-4 45.0 3 AGGCGAT 50 2.1827873E-11 45.0 7 CGCCGGT 25 3.8718856E-5 45.0 28 CTATCTC 45 1.9059371E-8 40.000004 5 GGTACCT 40 3.4271034E-7 39.375 8 CGAAAAA 75 0.0 39.0 22 ATCCTGC 35 6.206097E-6 38.571426 20 CTACAGG 35 6.206097E-6 38.571426 2 CACACCC 70 0.0 38.571426 29 AATAGGA 35 6.206097E-6 38.571426 4 AGCATAT 30 1.1344211E-4 37.500004 31 CGGTAGT 30 1.1344211E-4 37.500004 12 TGTACGG 30 1.1344211E-4 37.500004 2 GCATATG 30 1.1344211E-4 37.500004 32 TGCGGGA 85 0.0 37.058823 4 CCATTAT 85 0.0 37.058823 34 TACGGGG 55 2.7102942E-9 36.81818 4 GATTGGG 55 2.7102942E-9 36.81818 3 >>END_MODULE