SRR3551145_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551145_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	150376
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTC	305	0.20282491887003246	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCG	301	0.20016491993403202	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	282	0.18752992498803	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGC	243	0.16159493536202585	No Hit
GCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC	210	0.13964994414002235	TruSeq Adapter, Index 15 (95% over 21bp)
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	153	0.10174495930201628	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACGG	30	2.1528886E-6	45.000004	2
AACGTCC	20	7.013719E-4	45.0	21
ATGGGCG	20	7.013719E-4	45.0	5
ATCTATC	25	3.874595E-5	45.0	3
ATTAGGC	20	7.013719E-4	45.0	4
CACGGGA	20	7.013719E-4	45.0	4
CGAAAGG	25	3.874595E-5	45.0	3
CGCGGGA	25	3.874595E-5	45.0	4
TTAGCGG	20	7.013719E-4	45.0	2
GGGTCGT	20	7.013719E-4	45.0	7
CTTTTCG	25	3.874595E-5	45.0	26
TTTCGAC	20	7.013719E-4	45.0	24
AAGGTAT	25	3.874595E-5	45.0	6
TACGGGA	55	1.8189894E-12	45.0	4
ACGGGCT	20	7.013719E-4	45.0	5
ACGGGAC	25	3.874595E-5	45.0	5
TTACGGG	25	3.874595E-5	45.0	3
CAGTCTC	25	3.874595E-5	45.0	6
TTCGCCG	25	3.874595E-5	45.0	29
AAGGACC	20	7.013719E-4	45.0	6