##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551145_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 150376 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.965001063999573 33.0 31.0 34.0 30.0 34.0 2 32.08074426770229 33.0 31.0 34.0 30.0 34.0 3 31.986939405224238 33.0 31.0 34.0 30.0 34.0 4 35.75011304995478 37.0 35.0 37.0 35.0 37.0 5 35.81280922487631 37.0 35.0 37.0 35.0 37.0 6 35.78516518593393 37.0 35.0 37.0 35.0 37.0 7 26.80314677874129 35.0 10.0 37.0 0.0 37.0 8 31.122712400915038 35.0 19.0 37.0 17.0 37.0 9 35.85164520934192 39.0 32.0 39.0 32.0 39.0 10 36.64306804277278 38.0 35.0 39.0 33.0 39.0 11 37.06256982497207 39.0 37.0 39.0 34.0 39.0 12 37.111640155343935 39.0 37.0 39.0 34.0 39.0 13 37.077199819120075 39.0 37.0 39.0 33.0 39.0 14 38.28174708730116 40.0 38.0 41.0 34.0 41.0 15 38.342827312869076 40.0 38.0 41.0 34.0 41.0 16 38.29726153109539 40.0 37.0 41.0 34.0 41.0 17 38.19789062084375 40.0 37.0 41.0 33.0 41.0 18 38.084960366015856 40.0 37.0 41.0 33.0 41.0 19 37.977050859179656 40.0 37.0 41.0 33.0 41.0 20 38.04034553386179 40.0 37.0 41.0 34.0 41.0 21 37.98156620737352 40.0 37.0 41.0 33.0 41.0 22 37.97488296004681 40.0 37.0 41.0 33.0 41.0 23 37.92069878172049 40.0 37.0 41.0 33.0 41.0 24 37.855222907910836 40.0 36.0 41.0 33.0 41.0 25 37.75400329839868 40.0 36.0 41.0 33.0 41.0 26 37.55506197797521 40.0 36.0 41.0 33.0 41.0 27 37.44551657179337 39.0 36.0 41.0 33.0 41.0 28 37.43887987444805 39.0 36.0 41.0 33.0 41.0 29 37.33993456402617 39.0 36.0 41.0 32.0 41.0 30 37.298192530722986 39.0 36.0 41.0 32.0 41.0 31 37.19544342182263 39.0 36.0 41.0 32.0 41.0 32 37.0197837420865 39.0 35.0 41.0 31.0 41.0 33 36.95637601744959 39.0 35.0 41.0 31.0 41.0 34 36.76030084587966 39.0 35.0 41.0 30.0 41.0 35 36.595773261690695 39.0 35.0 41.0 30.0 41.0 36 36.398175240729906 39.0 35.0 41.0 30.0 41.0 37 36.38695004521998 39.0 35.0 41.0 30.0 41.0 38 36.201408469436615 39.0 35.0 40.0 30.0 41.0 39 36.103573708570515 39.0 35.0 40.0 29.0 41.0 40 35.787885034845985 39.0 35.0 40.0 27.0 41.0 41 35.59127121349152 38.0 35.0 40.0 26.0 41.0 42 35.50537319785072 38.0 35.0 40.0 26.0 41.0 43 35.43411182635527 38.0 35.0 40.0 26.0 41.0 44 35.206628717348515 38.0 34.0 40.0 25.0 41.0 45 35.07317657072937 38.0 34.0 40.0 24.0 41.0 46 34.81059477576209 38.0 34.0 40.0 23.0 41.0 47 34.638393094642765 38.0 34.0 40.0 23.0 41.0 48 34.45356306857477 38.0 33.0 40.0 23.0 41.0 49 34.22478986008406 37.0 33.0 40.0 22.0 41.0 50 34.04025243389903 37.0 33.0 40.0 21.0 41.0 51 31.653541788583283 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 14.0 10 11.0 11 12.0 12 6.0 13 6.0 14 9.0 15 8.0 16 14.0 17 25.0 18 54.0 19 117.0 20 192.0 21 286.0 22 434.0 23 734.0 24 930.0 25 1297.0 26 1715.0 27 2083.0 28 2325.0 29 2774.0 30 3458.0 31 4191.0 32 5158.0 33 6940.0 34 10297.0 35 12805.0 36 14315.0 37 22346.0 38 28131.0 39 29678.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.97693780922487 20.94350162259935 23.232430707027717 12.847129861148055 2 31.147257541096984 25.99151460339416 24.419455232217906 18.44177262329095 3 31.845507261797096 25.513379794648085 26.2575144969942 16.383598446560622 4 29.964888014044792 25.397669840932064 26.12318455072618 18.51425759429696 5 25.289274884290048 30.850667659732938 24.023780390487843 19.836277065489174 6 25.08977496409002 36.2424855030058 24.25254029898388 14.415199233920307 7 58.90434643826142 28.575703569718574 7.825051869979252 4.694898122040751 8 78.20330371867851 7.440682023727191 9.212241315103475 5.1437729424908225 9 71.52404639038144 9.095866361653455 11.594270362291855 7.7858168856732455 10 39.530244187902326 26.583364366654255 18.914587434165025 14.971804011278394 11 32.43536202585519 25.95959461616215 23.152630738947703 18.452412619034952 12 29.80927807628877 23.078815768473692 27.920013831994467 19.19189232324307 13 23.99917540032984 25.6071447571421 29.824573070170775 20.56910677235729 14 19.922727030909186 30.04801298079481 27.711203915518436 22.31805607277757 15 19.527052189179127 26.647204341118265 34.127121349151466 19.69862212055115 16 21.214156514337397 25.90040963983614 31.689897324041073 21.195536521785392 17 21.532026387189447 24.884290046283983 28.330318667872533 25.25336489865404 18 21.73684630526148 27.525668989732406 28.7319785072086 22.00550619779752 19 25.14363994254402 26.69441932223227 26.643879342448262 21.518061392775444 20 26.39849444060222 26.105894557642177 27.519683992126403 19.975927009629196 21 25.477469809012078 26.462334415066234 27.793663882534446 20.266531893387242 22 23.119380752247697 26.280789487684203 25.729504708198114 24.87032505186998 23 23.889450444219822 26.955099217960317 27.101399159440337 22.054051178379527 24 23.1187157525137 25.12102995158802 28.044368782252487 23.715885513645794 25 23.037585784965685 27.4910890035644 26.19899452040219 23.272330691067726 26 21.399026440389424 29.26331329467468 26.784859286056285 22.55280097887961 27 23.99119540352184 27.561578975368413 26.067989572804173 22.379236048305582 28 20.297786880885248 28.00513379794648 28.590333563866576 23.1067457573017 29 21.492791402883437 28.322338671064536 27.487764004894398 22.697105921157632 30 21.976911209235517 25.491434803426078 27.19516412193435 25.336489865404054 31 23.06352077459169 27.430574027770387 24.717375113049954 24.78853008458797 32 23.580225567909775 27.55027397989041 27.075464169814335 21.794036282385488 33 22.17441613023355 27.062164175134328 25.780709687716126 24.982710006915998 34 22.598020960791615 26.883279246688303 26.83805926477629 23.680640527743787 35 22.334016066393573 24.541815183273926 27.370724051710376 25.75344469862212 36 21.970261211895515 27.050194179922325 27.224424110230355 23.7551204979518 37 22.242911102835556 26.82874926850029 28.702053519178595 22.226286109485557 38 21.18223652710539 26.228254508698196 27.123344150662337 25.466164813534075 39 23.656700537319786 24.76658509336596 28.352928658828535 23.223785710485718 40 23.256370697451718 24.13483534606586 30.37984784806086 22.228946108421557 41 20.574426770229294 26.287439485024205 28.964728414108638 24.173405330637866 42 21.94432622226951 25.963584614566155 29.026573389370647 23.065515773793692 43 22.98505080597968 24.92352503058999 28.1208437516625 23.970580411767838 44 21.665691333723466 25.977549608980155 27.456509017396392 24.900250039899984 45 21.692956322817473 24.80981007607597 26.8606692557323 26.636564345374264 46 22.471006011597595 26.703729318508273 26.354604458158214 24.470660211735915 47 22.60334095866362 24.576395169441934 29.912353035058786 22.907910836835665 48 21.39104644358142 24.348300260679896 29.000638399744638 25.260014895994043 49 20.530536787785287 24.353620258551896 30.393812842474865 24.722030111187955 50 20.37825184869926 23.88280044687982 29.657658136936742 26.081289567484173 51 20.648241740703305 24.238575304569878 27.74910890035644 27.36407405437038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 100.0 1 215.5 2 331.0 3 503.5 4 676.0 5 505.0 6 334.0 7 301.0 8 268.0 9 272.5 10 277.0 11 303.5 12 330.0 13 335.0 14 340.0 15 360.0 16 380.0 17 360.5 18 341.0 19 397.5 20 454.0 21 596.0 22 738.0 23 786.0 24 834.0 25 1025.5 26 1450.0 27 1683.0 28 2040.5 29 2398.0 30 2688.5 31 2979.0 32 3181.5 33 3384.0 34 3614.0 35 3844.0 36 4182.5 37 4521.0 38 5083.0 39 5645.0 40 6429.0 41 7213.0 42 7841.5 43 8470.0 44 9509.0 45 10548.0 46 11806.5 47 13065.0 48 13123.5 49 13182.0 50 12498.0 51 11814.0 52 10625.5 53 9437.0 54 8687.0 55 7937.0 56 7486.5 57 7036.0 58 6987.5 59 6939.0 60 6928.5 61 6918.0 62 6320.5 63 5723.0 64 4789.0 65 3855.0 66 3161.5 67 2468.0 68 2074.5 69 1681.0 70 1463.0 71 1245.0 72 995.5 73 746.0 74 609.0 75 350.0 76 228.0 77 183.5 78 139.0 79 112.0 80 85.0 81 62.0 82 39.0 83 31.0 84 23.0 85 18.0 86 13.0 87 11.0 88 9.0 89 10.0 90 11.0 91 7.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 150376.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.86234505506198 #Duplication Level Percentage of deduplicated Percentage of total 1 71.78218482015444 35.79228068308773 2 10.05054613835505 10.022875990849604 3 5.239994131846735 7.838351864659254 4 3.4288686467238363 6.838857264457094 5 2.4806284258678866 6.18449752620099 6 1.7591123084514741 5.2628078948768415 7 1.359010949440525 4.743443102622759 8 1.0415972046251716 4.154918338032665 9 0.7988690468251958 3.5850135659945734 >10 2.0218455342019976 13.367159653136138 >50 0.020005067950547472 0.643719742512103 >100 0.017337725557141144 1.5660743735702507 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTC 305 0.20282491887003246 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCG 301 0.20016491993403202 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 282 0.18752992498803 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGC 243 0.16159493536202585 No Hit GCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 210 0.13964994414002235 TruSeq Adapter, Index 15 (95% over 21bp) AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 153 0.10174495930201628 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.649997340001063E-4 0.0 0.0 0.1542799382880247 0.0 2 6.649997340001063E-4 0.0 0.0 0.8418896632441347 0.0 3 6.649997340001063E-4 0.0 0.0 1.105894557642177 0.0 4 6.649997340001063E-4 0.0 0.0 1.418444432622227 0.0 5 6.649997340001063E-4 0.0 0.0 2.669973932010427 0.0 6 6.649997340001063E-4 0.0 0.0 3.2172687130925146 0.0 7 6.649997340001063E-4 0.0 0.0 3.8410384635846144 0.0 8 6.649997340001063E-4 0.0 0.0 4.918338032664787 0.0 9 6.649997340001063E-4 0.0 0.0 5.292732882906847 0.0 10 6.649997340001063E-4 0.0 0.0 6.49837740064904 0.0 11 6.649997340001063E-4 0.0 0.0 7.621561951375219 0.0 12 6.649997340001063E-4 0.0 0.0 8.781321487471406 0.0 13 6.649997340001063E-4 0.0 0.0 9.165026333989466 0.0 14 6.649997340001063E-4 0.0 0.0 9.357876256849497 0.0 15 6.649997340001063E-4 0.0 0.0 9.68705112517955 0.0 16 6.649997340001063E-4 0.0 0.0 10.31880087247965 0.0 17 6.649997340001063E-4 0.0 0.0 11.043650582539767 0.0 18 6.649997340001063E-4 0.0 0.0 11.838990264403895 0.0 19 6.649997340001063E-4 0.0 0.0 12.261930095227962 0.0 20 6.649997340001063E-4 0.0 0.0 12.726764909294037 0.0 21 6.649997340001063E-4 0.0 0.0 13.301324679470127 0.0 22 6.649997340001063E-4 0.0 0.0 13.87654944938022 0.0 23 6.649997340001063E-4 0.0 0.0 14.448449220620311 0.0 24 6.649997340001063E-4 0.0 0.0 14.943874022450391 0.0 25 6.649997340001063E-4 0.0 0.0 15.342208863116454 0.0 26 6.649997340001063E-4 0.0 0.0 15.717933712826515 0.0 27 6.649997340001063E-4 0.0 0.0 16.07437357025057 0.0 28 6.649997340001063E-4 0.0 0.0 16.42748842900463 0.0 29 6.649997340001063E-4 0.0 0.0 16.81850827259669 0.0 30 6.649997340001063E-4 0.0 0.0 17.280683087726764 0.0 31 6.649997340001063E-4 0.0 0.0 17.728892908442837 0.0 32 6.649997340001063E-4 0.0 0.0 18.152497739000903 0.0 33 6.649997340001063E-4 0.0 0.0 18.56479757408097 0.0 34 6.649997340001063E-4 0.0 0.0 18.92522742990903 0.0 35 6.649997340001063E-4 0.0 0.0 19.338192264723094 0.0 36 6.649997340001063E-4 0.0 0.0 19.763127094749162 0.0 37 6.649997340001063E-4 0.0 0.0 20.173431930627228 0.0 38 6.649997340001063E-4 0.0 0.0 20.56378677448529 0.0 39 6.649997340001063E-4 0.0 0.0 20.94483162206735 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGG 30 2.1528886E-6 45.000004 2 AACGTCC 20 7.013719E-4 45.0 21 ATGGGCG 20 7.013719E-4 45.0 5 ATCTATC 25 3.874595E-5 45.0 3 ATTAGGC 20 7.013719E-4 45.0 4 CACGGGA 20 7.013719E-4 45.0 4 CGAAAGG 25 3.874595E-5 45.0 3 CGCGGGA 25 3.874595E-5 45.0 4 TTAGCGG 20 7.013719E-4 45.0 2 GGGTCGT 20 7.013719E-4 45.0 7 CTTTTCG 25 3.874595E-5 45.0 26 TTTCGAC 20 7.013719E-4 45.0 24 AAGGTAT 25 3.874595E-5 45.0 6 TACGGGA 55 1.8189894E-12 45.0 4 ACGGGCT 20 7.013719E-4 45.0 5 ACGGGAC 25 3.874595E-5 45.0 5 TTACGGG 25 3.874595E-5 45.0 3 CAGTCTC 25 3.874595E-5 45.0 6 TTCGCCG 25 3.874595E-5 45.0 29 AAGGACC 20 7.013719E-4 45.0 6 >>END_MODULE