##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551144_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 160710 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04675502457843 33.0 31.0 34.0 30.0 34.0 2 32.14295936780536 33.0 31.0 34.0 30.0 34.0 3 32.0269616078651 33.0 31.0 34.0 30.0 34.0 4 35.77721361458528 37.0 35.0 37.0 35.0 37.0 5 35.84831062161658 37.0 35.0 37.0 35.0 37.0 6 35.79545143426047 37.0 35.0 37.0 35.0 37.0 7 26.636936096073672 35.0 10.0 37.0 0.0 37.0 8 30.964239935287164 35.0 19.0 37.0 17.0 37.0 9 35.8025325119781 39.0 32.0 39.0 32.0 39.0 10 36.684419140065955 38.0 35.0 39.0 33.0 39.0 11 37.0382054632568 39.0 37.0 39.0 34.0 39.0 12 37.09629767904922 39.0 37.0 39.0 34.0 39.0 13 37.02110011822538 39.0 37.0 39.0 33.0 39.0 14 38.33175906913073 40.0 38.0 41.0 34.0 41.0 15 38.31393814946176 40.0 37.0 41.0 34.0 41.0 16 38.304243668720055 40.0 37.0 41.0 34.0 41.0 17 38.13717254682347 40.0 37.0 41.0 33.0 41.0 18 38.00899135088047 40.0 37.0 41.0 33.0 41.0 19 37.86473772633937 40.0 37.0 41.0 33.0 41.0 20 37.975807354862795 40.0 37.0 41.0 33.0 41.0 21 37.992956256611286 40.0 37.0 41.0 33.0 41.0 22 38.027565179515896 40.0 37.0 41.0 33.0 41.0 23 38.04025885134715 40.0 37.0 41.0 34.0 41.0 24 37.92232592869143 40.0 36.0 41.0 33.0 41.0 25 37.86410926513596 40.0 36.0 41.0 33.0 41.0 26 37.70989359716259 40.0 36.0 41.0 33.0 41.0 27 37.64830439922842 40.0 36.0 41.0 33.0 41.0 28 37.61887250326675 40.0 36.0 41.0 33.0 41.0 29 37.55634372472155 40.0 36.0 41.0 33.0 41.0 30 37.50830688818368 40.0 36.0 41.0 33.0 41.0 31 37.40189782838654 40.0 36.0 41.0 33.0 41.0 32 37.28650364009707 40.0 36.0 41.0 32.0 41.0 33 37.19489764171489 40.0 36.0 41.0 32.0 41.0 34 37.03088793478937 39.0 35.0 41.0 31.0 41.0 35 36.984916931118164 39.0 35.0 41.0 31.0 41.0 36 36.77261526974053 39.0 35.0 41.0 31.0 41.0 37 36.74437807230415 39.0 35.0 41.0 31.0 41.0 38 36.60153070748553 39.0 35.0 41.0 30.0 41.0 39 36.54683591562441 39.0 35.0 41.0 30.0 41.0 40 36.28483604007218 39.0 35.0 40.0 30.0 41.0 41 36.146512351440485 39.0 35.0 40.0 29.0 41.0 42 36.00942691805115 39.0 35.0 40.0 29.0 41.0 43 35.96328168751167 39.0 35.0 40.0 29.0 41.0 44 35.78799701325369 38.0 35.0 40.0 28.0 41.0 45 35.76737601891606 38.0 35.0 40.0 28.0 41.0 46 35.502936967208015 38.0 35.0 40.0 27.0 41.0 47 35.29015618194263 38.0 34.0 40.0 26.0 41.0 48 35.13704809906042 38.0 34.0 40.0 25.0 41.0 49 34.9227366063095 38.0 34.0 40.0 24.0 41.0 50 34.806265944869644 38.0 34.0 40.0 24.0 41.0 51 32.441353991662 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 16.0 10 16.0 11 12.0 12 10.0 13 6.0 14 5.0 15 12.0 16 19.0 17 48.0 18 70.0 19 100.0 20 160.0 21 277.0 22 405.0 23 623.0 24 869.0 25 1101.0 26 1501.0 27 1804.0 28 2160.0 29 2612.0 30 3320.0 31 4127.0 32 5507.0 33 7176.0 34 10900.0 35 13355.0 36 15060.0 37 23921.0 38 30903.0 39 34601.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.619438740588635 19.161844315848423 22.968079148777303 12.25063779478564 2 29.200423122394376 29.519009395806112 24.858440669528964 16.422126812270548 3 30.73113060792732 28.204218779167444 25.91811337191214 15.146537240993094 4 28.504760126936716 23.995395432767097 29.601144919420076 17.898699520876114 5 28.178706987741897 28.476137141434883 23.254931242610912 20.090224628212308 6 25.44147843942505 37.150146226121585 24.255491257544644 13.152884076908716 7 58.25399788438803 28.544583411113184 9.202289838840146 3.9991288656586397 8 77.46437682782653 8.878103416091095 9.256424615767532 4.401095140314853 9 71.13620807665983 8.935349387094767 10.10391388214797 9.824528654097442 10 40.46667911144297 26.77058054881464 18.21417460021156 14.548565739530833 11 32.0135648061726 25.429033663119903 24.374961110074047 18.18244042063344 12 30.688196129674566 22.458465559081574 27.402775185116045 19.450563126127808 13 24.254246779914133 24.575322008586895 30.82633314666169 20.344098064837286 14 20.48347955945492 28.77418953394313 27.37539667724473 23.366934229357227 15 19.563810590504634 26.708978906104164 34.684836040072184 19.04237446331902 16 22.503888992595357 25.598282620869888 30.00622238815257 21.89160599838218 17 22.070188538361023 25.078090971314793 29.75297119034285 23.098749299981332 18 22.109389583722233 28.034347582602205 28.288843258042434 21.567419575633128 19 24.290336631199054 28.3155995270985 25.649928442536247 21.7441353991662 20 26.344346960363385 26.802314728392755 28.586273411735423 18.26706489950843 21 24.96111007404642 28.432580424366872 26.95102980523925 19.655279696347456 22 23.060792732250636 24.93559828262087 26.808537116545327 25.195071868583163 23 24.110509613589695 28.252131167942256 27.53717876921162 20.100180449256424 24 24.22189036152075 24.439673946860804 27.689627278949665 23.64880841266878 25 22.188413913259907 30.191649555099247 25.50432455976604 22.115611971874806 26 21.878538983261777 27.828386534752035 27.246593242486465 23.04648123949972 27 23.89148155061913 28.553916993342042 26.052516956007715 21.502084500031113 28 20.881712401219588 27.69398295065646 29.85252940078402 21.57177524733993 29 23.33271109451808 25.987181880405704 29.136332524422876 21.543774500653353 30 21.820670773442846 26.88880592371352 30.090846867027565 21.199676435816066 31 26.052516956007715 25.675440233961794 26.015804865907537 22.256237944122955 32 24.824839773505072 28.44875863356356 27.46126563375023 19.265135959181134 33 23.878414535498724 28.178706987741897 25.63063903926327 22.31223943749611 34 23.096260344720303 26.408437558334892 28.580051023582854 21.915251073361958 35 22.490199738659697 26.93982950656462 27.83709787816564 22.732872876610045 36 24.598967083566674 29.001306701512043 26.164519942754026 20.235206272167257 37 22.626470039201045 28.60618505382366 29.48478626096696 19.282558646008336 38 23.98108394001618 28.97517267127123 24.96484350693796 22.078899881774625 39 24.269802750295565 25.14093709165578 28.127683404890796 22.46157675315786 40 22.91083317777363 28.063592806919296 29.175533569784086 19.850040445522993 41 21.57675315786199 28.34111131852405 27.37913011013627 22.70300541347769 42 21.289278825213117 27.722605936158295 29.308692676249144 21.67942256237944 43 25.338186796092337 25.582726650488457 26.25412233215108 22.824964221268125 44 22.76834048907971 26.231721734801816 28.006346835915625 22.99359094020285 45 21.8592495799888 25.88575695351876 27.17628025636239 25.07871321013005 46 23.39866840893535 29.0280629705681 25.622549934664924 21.95071868583162 47 21.776491817559577 26.072428598095946 31.202787629892352 20.94829195445212 48 23.50880467923589 25.626283367556468 27.525356231721737 23.339555721485905 49 20.85060046045672 25.767531578619874 30.399477319395185 22.98239064152822 50 20.392010453612098 25.868334266691555 29.60052268060482 24.139132599091532 51 21.109451807603758 25.38609918486715 28.067948478626096 25.436500528902993 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 90.0 1 236.5 2 383.0 3 773.0 4 1163.0 5 809.5 6 456.0 7 405.0 8 354.0 9 351.5 10 349.0 11 315.5 12 282.0 13 340.0 14 398.0 15 380.0 16 362.0 17 406.0 18 450.0 19 479.0 20 508.0 21 638.0 22 768.0 23 781.0 24 794.0 25 1071.0 26 1499.0 27 1650.0 28 2098.0 29 2546.0 30 2952.0 31 3358.0 32 3730.5 33 4103.0 34 4617.5 35 5132.0 36 5362.5 37 5593.0 38 6021.5 39 6450.0 40 7458.0 41 8466.0 42 9701.5 43 10937.0 44 14388.5 45 17840.0 46 15068.0 47 12296.0 48 11297.5 49 10299.0 50 9525.0 51 8751.0 52 8332.0 53 7913.0 54 7521.5 55 7130.0 56 7347.0 57 7564.0 58 7644.5 59 7725.0 60 7638.5 61 7552.0 62 6712.0 63 5872.0 64 4960.5 65 4049.0 66 3367.0 67 2685.0 68 2306.5 69 1928.0 70 1557.0 71 1186.0 72 1006.5 73 827.0 74 648.0 75 381.5 76 294.0 77 230.0 78 166.0 79 142.0 80 118.0 81 80.5 82 43.0 83 37.5 84 32.0 85 20.5 86 9.0 87 11.0 88 13.0 89 8.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 160710.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.98979528342978 #Duplication Level Percentage of deduplicated Percentage of total 1 66.51437139300668 29.25953580984382 2 11.43629059635623 10.061601642710473 3 6.4459092452189655 8.50662684338249 4 4.236449021161028 7.454421006782404 5 3.076553128889895 6.766847115923092 6 2.189657123458187 5.779354116109763 7 1.728527780921127 5.322630825710908 8 1.2094036437705105 4.2561134963599025 9 0.8628493832748669 3.4160910957625537 >10 2.237750367771868 12.827453176529152 >50 0.03394817245671608 1.0578059859374027 >100 0.02121760778544755 1.9588077904299668 >500 0.002829014371393007 0.629083442225126 >1k 0.00424352155708951 2.70362765229295 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 1692 1.0528280754153443 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 1437 0.8941571775247339 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 1216 0.7566423993528716 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTT 509 0.31671955696596354 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 502 0.3123638852591625 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 353 0.21965030178582542 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCT 313 0.19476074917553357 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 293 0.18231597287038764 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTC 270 0.16800448011946986 No Hit GAATCTATCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 232 0.14435940513969261 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT 229 0.1424926886939207 No Hit GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 223 0.13875925580237697 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 180 0.11200298674631323 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 175 0.10889179267002676 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 170 0.10578059859374027 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 163 0.10142492688693922 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06969074730881712 0.0 2 0.0 0.0 0.0 0.47787941011760315 0.0 3 0.0 0.0 0.0 0.5880156804181444 0.0 4 0.0 0.0 0.0 0.9377138945927447 0.0 5 0.0 0.0 0.0 2.5430900379565675 0.0 6 0.0 0.0 0.0 2.8560761620309876 0.0 7 0.0 0.0 0.0 3.3146661688756143 0.0 8 0.0 0.0 0.0 3.9729948354178335 0.0 9 0.0 0.0 0.0 4.147221703689876 0.0 10 0.0 0.0 0.0 6.00087113434136 0.0 11 0.0 0.0 0.0 6.501773380623483 0.0 12 0.0 0.0 0.0 8.100304897019477 0.0 13 0.0 0.0 0.0 8.33862236326302 0.0 14 0.0 0.0 0.0 8.474270424989111 0.0 15 0.0 0.0 0.0 8.738099682658204 0.0 16 0.0 0.0 0.0 9.042374463319021 0.0 17 0.0 0.0 0.0 9.372161035405389 0.0 18 0.0 0.0 0.0 9.72621492128679 0.0 19 0.0 0.0 0.0 9.94959865596416 0.0 20 0.0 0.0 0.0 10.172982390641529 0.0 21 0.0 0.0 0.0 10.459212245659884 0.0 22 0.0 0.0 0.0 10.777176280256363 0.0 23 0.0 0.0 0.0 11.087051210254495 0.0 24 0.0 0.0 0.0 11.343413602140501 0.0 25 0.0 0.0 0.0 11.5736419637857 0.0 26 0.0 0.0 0.0 11.76715823533072 0.0 27 0.0 0.0 0.0 11.961918984506253 0.0 28 0.0 0.0 0.0 12.190902868520938 0.0 29 0.0 0.0 0.0 12.440420633439114 0.0 30 0.0 0.0 0.0 12.724783772011698 0.0 31 0.0 0.0 0.0 12.98923526849605 0.0 32 0.0 0.0 0.0 13.242486466305769 0.0 33 0.0 0.0 0.0 13.467114678613651 0.0 34 0.0 0.0 0.0 13.725966025760687 0.0 35 0.0 0.0 0.0 13.990417522245037 0.0 36 0.0 0.0 0.0 14.266691556219277 0.0 37 0.0 0.0 0.0 14.548565739530831 0.0 38 0.0 0.0 0.0 14.802439176155808 0.0 39 0.0 0.0 0.0 15.056312612780784 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAATA 20 7.0151663E-4 45.0 20 TTGATCC 25 3.875794E-5 45.0 17 TTAGCAG 20 7.0151663E-4 45.0 2 ATAGCGG 20 7.0151663E-4 45.0 2 TATGCGG 25 3.875794E-5 45.0 2 CTGAAGC 40 6.7520887E-9 45.0 5 CAAGGTG 20 7.0151663E-4 45.0 5 CTACGAA 40 6.7520887E-9 45.0 11 TACGAAT 40 6.7520887E-9 45.0 12 TCTAACT 35 1.2032251E-7 45.0 24 TCGTCCC 35 1.2032251E-7 45.0 38 TAGGGTC 20 7.0151663E-4 45.0 5 CGAATGG 20 7.0151663E-4 45.0 2 CGAATAT 40 6.7520887E-9 45.0 14 TCATAGG 20 7.0151663E-4 45.0 3 GCTACGA 40 6.7520887E-9 45.0 10 TAGTGAC 20 7.0151663E-4 45.0 44 TAATGCG 20 7.0151663E-4 45.0 1 TCGCGGG 20 7.0151663E-4 45.0 3 TATGGGA 75 0.0 42.0 4 >>END_MODULE