SRR3551142_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551142_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	92417
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	411	0.44472337340532586	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC	352	0.3808823052035881	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG	324	0.3505848491078481	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	293	0.3170412370018503	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	172	0.1861129445881169	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	98	0.10604109633508987	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	94	0.10171288832141272	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACCCC	30	2.1438227E-6	45.000004	19
CTCGTAA	30	2.1438227E-6	45.000004	33
TAAAACG	30	2.1438227E-6	45.000004	21
CGAATAG	30	2.1438227E-6	45.000004	26
AACGAAT	30	2.1438227E-6	45.000004	24
TCGTAAC	30	2.1438227E-6	45.000004	34
CGTAACC	30	2.1438227E-6	45.000004	35
GCTCGTA	30	2.1438227E-6	45.000004	32
TCTATCT	30	2.1438227E-6	45.000004	4
TTGATGG	20	6.9996226E-4	45.0	2
CGGGTAT	20	6.9996226E-4	45.0	6
AGTCACC	25	3.862928E-5	45.0	17
CGTGCGG	20	6.9996226E-4	45.0	2
CCAATTA	20	6.9996226E-4	45.0	25
ACGGGCT	20	6.9996226E-4	45.0	5
AATGACT	20	6.9996226E-4	45.0	2
GATGGGC	20	6.9996226E-4	45.0	4
CTACGGG	20	6.9996226E-4	45.0	3
TCCAATT	20	6.9996226E-4	45.0	24
CAAGCTT	45	3.765308E-10	45.0	22