##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551142_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 92417 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.952649404330373 33.0 31.0 34.0 30.0 34.0 2 32.0839888765054 33.0 31.0 34.0 30.0 34.0 3 31.953276994492356 33.0 31.0 34.0 30.0 34.0 4 35.707185907354706 37.0 35.0 37.0 35.0 37.0 5 35.79291688758562 37.0 35.0 37.0 35.0 37.0 6 35.752469783697805 37.0 35.0 37.0 35.0 37.0 7 26.77694580001515 35.0 10.0 37.0 0.0 37.0 8 31.067011480571757 35.0 19.0 37.0 17.0 37.0 9 35.82559485808888 39.0 32.0 39.0 32.0 39.0 10 36.63639806529102 38.0 35.0 39.0 33.0 39.0 11 36.99450317582263 39.0 37.0 39.0 34.0 39.0 12 37.069976303061125 39.0 37.0 39.0 34.0 39.0 13 37.04015494984689 39.0 37.0 39.0 33.0 39.0 14 38.23731564538992 40.0 37.0 41.0 33.0 41.0 15 38.303991689840615 40.0 38.0 41.0 34.0 41.0 16 38.26900894857007 40.0 37.0 41.0 34.0 41.0 17 38.14790568834738 40.0 37.0 41.0 33.0 41.0 18 38.026683402404316 40.0 37.0 41.0 33.0 41.0 19 37.922070614713746 40.0 37.0 41.0 33.0 41.0 20 37.97673588192649 40.0 37.0 41.0 33.0 41.0 21 37.938409599965375 40.0 37.0 41.0 33.0 41.0 22 37.943397859701136 40.0 37.0 41.0 33.0 41.0 23 37.91382537844769 40.0 36.0 41.0 33.0 41.0 24 37.869277297466915 40.0 36.0 41.0 33.0 41.0 25 37.76021727604228 40.0 36.0 41.0 33.0 41.0 26 37.62042697772055 40.0 36.0 41.0 33.0 41.0 27 37.475161496261514 39.0 36.0 41.0 33.0 41.0 28 37.330696733285 39.0 36.0 41.0 32.0 41.0 29 37.321358624495495 39.0 36.0 41.0 32.0 41.0 30 37.244944112014025 39.0 36.0 41.0 32.0 41.0 31 37.02911801941201 39.0 35.0 41.0 31.0 41.0 32 36.87481740372442 39.0 35.0 41.0 31.0 41.0 33 36.785374985121784 39.0 35.0 41.0 31.0 41.0 34 36.66602464914464 39.0 35.0 41.0 30.0 41.0 35 36.57245961240897 39.0 35.0 41.0 30.0 41.0 36 36.32161831697631 39.0 35.0 41.0 30.0 41.0 37 36.20835993377842 39.0 35.0 41.0 30.0 41.0 38 36.01665278033262 39.0 35.0 40.0 29.0 41.0 39 36.0700304056613 39.0 35.0 40.0 29.0 41.0 40 35.93739247108216 39.0 35.0 40.0 28.0 41.0 41 35.8406029193763 38.0 35.0 40.0 28.0 41.0 42 35.71428416849714 38.0 35.0 40.0 27.0 41.0 43 35.65204453726046 38.0 35.0 40.0 27.0 41.0 44 35.46495774586926 38.0 34.0 40.0 27.0 41.0 45 35.38513476957703 38.0 34.0 40.0 26.0 41.0 46 35.22474220111018 38.0 34.0 40.0 26.0 41.0 47 35.04864905807373 38.0 34.0 40.0 25.0 41.0 48 34.95672874038326 38.0 34.0 40.0 25.0 41.0 49 34.73270069359533 38.0 34.0 40.0 24.0 41.0 50 34.52305311793285 37.0 33.0 40.0 23.0 41.0 51 32.27232002770053 35.0 30.0 39.0 17.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 7.0 10 11.0 11 4.0 12 2.0 13 6.0 14 8.0 15 5.0 16 9.0 17 19.0 18 36.0 19 65.0 20 111.0 21 180.0 22 253.0 23 429.0 24 618.0 25 800.0 26 1082.0 27 1162.0 28 1378.0 29 1607.0 30 1888.0 31 2433.0 32 3134.0 33 4212.0 34 6345.0 35 8150.0 36 8971.0 37 13793.0 38 17401.0 39 18292.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.963058744603266 20.21273142387223 24.517134293474143 13.30707553805036 2 31.650021100014065 25.57970936083188 25.68575045716697 17.08451908198708 3 31.585097979808907 25.4293041323566 27.216854042005256 15.768743845829231 4 28.60188060638194 25.2724065918608 27.986193016436374 18.139519785320882 5 25.83507363363883 29.45994784509344 24.533365073525434 20.1716134477423 6 25.62731964898233 34.921064306350566 25.127411623402622 14.324204421264486 7 59.56371663222134 28.17014185701765 7.902225780971034 4.363915729789974 8 79.40530421892076 6.973825162037288 9.04162654057154 4.579244078470411 9 72.97466916259995 8.642349351309823 11.007715030784379 7.375266455305842 10 40.35188331151195 27.86175703604315 17.93392990467122 13.852429747773678 11 30.84822056548038 25.395760520250604 25.1317398314163 18.62427908285272 12 30.151379075278356 21.398660419619766 28.82045511107264 19.629505394029238 13 24.20442126448597 24.030210891935468 30.320179187811767 21.445188655766795 14 19.20317690468204 28.72415248276832 28.58023956631356 23.49243104623608 15 18.671889371003168 26.450761223584408 34.61376153737948 20.263587868032936 16 20.815434389776772 25.304868151963383 32.14235476156984 21.737342696690003 17 20.751593321575037 24.853652466537543 29.532445329322528 24.862308882564896 18 21.45600917580099 27.06320265751972 29.16671175216681 22.31407641451248 19 24.71406775809645 27.745977471677293 25.652206845060977 21.887747925165282 20 26.32524319118777 26.334981659218542 27.45165932674724 19.888115822846448 21 24.878539662616188 27.269874590172805 27.665905623424266 20.18568012378675 22 22.637609963534846 25.288637371912092 26.824069164764058 25.249683499789 23 22.520748347165565 27.573931203133622 27.236330978066807 22.668989471634006 24 23.310646309661642 24.470606057327117 28.446065117889567 23.772682515121677 25 22.582425311360463 27.175736065875327 26.45833558760834 23.78350303515587 26 22.448250862936472 28.165813649003972 26.025514786240628 23.360420701818928 27 23.759697891080645 28.205849573130486 26.478894575673305 21.55555796011556 28 20.980988346299924 28.00025969248082 29.283573368536093 21.735178592683162 29 24.1330058322603 26.54922795589556 27.79034160381748 21.527424608026664 30 23.90361080753541 26.21703799084584 28.388716361708344 21.490634839910406 31 24.17412380839023 26.68340240431955 26.59467414003917 22.547799647251047 32 25.866453141737995 28.249131653267256 25.335165608059125 20.549249596935628 33 23.839769739333672 28.099808476795396 26.442104807557048 21.61831697631388 34 23.04121536081024 26.157525130657778 29.021716783708623 21.779542724823354 35 22.711189499767357 25.516950344633564 27.15625912981378 24.6156010257853 36 23.911185171559346 28.225326509192033 26.963653873205146 20.899834446043478 37 23.263036021511194 28.351926593592086 28.480690781998984 19.904346602897736 38 21.60857850828311 27.710269755564454 27.27312074618306 23.40803098996938 39 22.856184468225543 26.469156107642533 28.807470487031605 21.86718893710032 40 23.506497722280535 24.36348290898861 30.941277037774434 21.188742330956426 41 20.03311079130463 27.216854042005256 29.366891372799376 23.383143793890735 42 23.215425733360746 25.87078134975167 27.984028912429533 22.929764004458054 43 23.395046365928344 27.16816170185139 27.375915686507895 22.060876245712368 44 22.410379042816796 26.41505350747157 28.0662648646894 23.108302585022237 45 21.907224861226833 25.59918629689343 26.820823008753802 25.672765833125936 46 22.756635683910968 27.553372215068656 26.624971596134912 23.065020504885464 47 21.872599197117413 26.26681238300313 29.675276193773875 22.185312226105587 48 22.159342978023524 25.024616683077788 28.42334202581776 24.392698313080928 49 20.567644480993756 25.69765302920458 30.017204626854365 23.717497862947294 50 20.15430061568759 25.756083837389227 29.54326584935672 24.546349697566466 51 20.27440838806713 25.008385903026497 27.976454548405595 26.740751160500775 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 57.0 1 124.0 2 191.0 3 428.0 4 665.0 5 474.0 6 283.0 7 264.5 8 246.0 9 238.0 10 230.0 11 229.5 12 229.0 13 235.5 14 242.0 15 249.5 16 257.0 17 248.5 18 240.0 19 258.5 20 277.0 21 370.5 22 464.0 23 474.0 24 484.0 25 621.0 26 886.5 27 1015.0 28 1237.0 29 1459.0 30 1668.5 31 1878.0 32 2011.5 33 2145.0 34 2438.5 35 2732.0 36 2780.5 37 2829.0 38 3134.0 39 3439.0 40 3966.0 41 4493.0 42 5157.0 43 5821.0 44 7278.0 45 8735.0 46 8387.0 47 8039.0 48 7740.5 49 7442.0 50 6495.0 51 5548.0 52 5037.5 53 4527.0 54 4372.0 55 4217.0 56 4247.0 57 4277.0 58 4350.0 59 4423.0 60 4243.5 61 4064.0 62 3739.0 63 3414.0 64 2844.5 65 2275.0 66 1948.0 67 1621.0 68 1349.5 69 1078.0 70 930.0 71 782.0 72 674.0 73 566.0 74 474.5 75 306.0 76 229.0 77 203.0 78 177.0 79 133.5 80 90.0 81 68.0 82 46.0 83 29.0 84 12.0 85 13.0 86 14.0 87 13.0 88 12.0 89 9.0 90 6.0 91 5.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 92417.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.97887834489326 #Duplication Level Percentage of deduplicated Percentage of total 1 71.16016546178528 39.834662453877534 2 12.262728573085397 13.72907581938388 3 6.22414659604902 10.452622353030288 4 3.86979549232613 8.665072443381629 5 2.4316696949781575 6.8061071015072985 6 1.5888970502957436 5.336680480863911 7 1.0206054045695288 3.999264204637675 8 0.5663586809448332 2.536329896014802 9 0.3228051184907411 1.6263241611391845 >10 0.512235667066146 4.051202700801801 >50 0.03092743650210693 1.2833136760552712 >100 0.009664823906908416 1.6793447093067293 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 411 0.44472337340532586 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 352 0.3808823052035881 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 324 0.3505848491078481 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 293 0.3170412370018503 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 172 0.1861129445881169 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 98 0.10604109633508987 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 94 0.10171288832141272 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1374206044342491 0.0 2 0.0 0.0 0.0 0.7109081662464698 0.0 3 0.0 0.0 0.0 0.9338108789508424 0.0 4 0.0 0.0 0.0 1.2508521159526926 0.0 5 0.0 0.0 0.0 2.4551759957583563 0.0 6 0.0 0.0 0.0 3.0351558695910925 0.0 7 0.0 0.0 0.0 3.6292024194682795 0.0 8 0.0 0.0 0.0 4.722074942921757 0.0 9 0.0 0.0 0.0 5.166798316327083 0.0 10 0.0 0.0 0.0 6.503132540549899 0.0 11 0.0 0.0 0.0 7.54514861984267 0.0 12 0.0 0.0 0.0 8.922600820195418 0.0 13 0.0 0.0 0.0 9.346765205535778 0.0 14 0.0 0.0 0.0 9.561011502212796 0.0 15 0.0 0.0 0.0 9.84450912710865 0.0 16 0.0 0.0 0.0 10.347663308698616 0.0 17 0.0 0.0 0.0 10.902755986452709 0.0 18 0.0 0.0 0.0 11.495720484326476 0.0 19 0.0 0.0 0.0 11.846305333434325 0.0 20 0.0 0.0 0.0 12.240172262678945 0.0 21 0.0 0.0 0.0 12.68381358408085 0.0 22 0.0 0.0 0.0 13.158834413581916 0.0 23 0.0 0.0 0.0 13.585162902929115 0.0 24 0.0 0.0 0.0 13.963881104125864 0.0 25 0.0 0.0 0.0 14.270101821093522 0.0 26 0.0 0.0 0.0 14.549271237975697 0.0 27 0.0 0.0 0.0 14.870640682991224 0.0 28 0.0 0.0 0.0 15.151974203880238 0.0 29 0.0 0.0 0.0 15.489574428947055 0.0 30 0.0 0.0 0.0 15.837995174048064 0.0 31 0.0 0.0 0.0 16.16369282707727 0.0 32 0.0 0.0 0.0 16.52726230022615 0.0 33 0.0 0.0 0.0 16.807513769111743 0.0 34 0.0 0.0 0.0 17.124555006113592 0.0 35 0.0 0.0 0.0 17.4783860112317 0.0 36 0.0 0.0 0.0 17.803001612257486 0.0 37 0.0 0.0 0.0 18.1406018373243 0.0 38 0.0 0.0 0.0 18.439248190268025 0.0 39 0.0 0.0 0.0 18.745468907235683 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACCCC 30 2.1438227E-6 45.000004 19 CTCGTAA 30 2.1438227E-6 45.000004 33 TAAAACG 30 2.1438227E-6 45.000004 21 CGAATAG 30 2.1438227E-6 45.000004 26 AACGAAT 30 2.1438227E-6 45.000004 24 TCGTAAC 30 2.1438227E-6 45.000004 34 CGTAACC 30 2.1438227E-6 45.000004 35 GCTCGTA 30 2.1438227E-6 45.000004 32 TCTATCT 30 2.1438227E-6 45.000004 4 TTGATGG 20 6.9996226E-4 45.0 2 CGGGTAT 20 6.9996226E-4 45.0 6 AGTCACC 25 3.862928E-5 45.0 17 CGTGCGG 20 6.9996226E-4 45.0 2 CCAATTA 20 6.9996226E-4 45.0 25 ACGGGCT 20 6.9996226E-4 45.0 5 AATGACT 20 6.9996226E-4 45.0 2 GATGGGC 20 6.9996226E-4 45.0 4 CTACGGG 20 6.9996226E-4 45.0 3 TCCAATT 20 6.9996226E-4 45.0 24 CAAGCTT 45 3.765308E-10 45.0 22 >>END_MODULE