##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551141_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 201051 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.145420813624405 33.0 31.0 34.0 30.0 34.0 2 32.27356740329568 33.0 31.0 34.0 30.0 34.0 3 32.14787790162695 33.0 31.0 34.0 30.0 34.0 4 35.881716579375386 37.0 35.0 37.0 35.0 37.0 5 35.946202704786344 37.0 35.0 37.0 35.0 37.0 6 35.93527015533372 37.0 35.0 37.0 35.0 37.0 7 26.696460102163133 36.0 10.0 37.0 0.0 37.0 8 31.099691123147856 36.0 19.0 37.0 17.0 37.0 9 35.97355894772968 39.0 32.0 39.0 32.0 39.0 10 36.82478077701678 38.0 35.0 39.0 34.0 39.0 11 37.18549522260521 39.0 37.0 39.0 34.0 39.0 12 37.196189026664875 39.0 37.0 39.0 34.0 39.0 13 37.13357804736112 39.0 37.0 39.0 34.0 39.0 14 38.37139830192339 40.0 38.0 41.0 34.0 41.0 15 38.44547900781394 40.0 38.0 41.0 34.0 41.0 16 38.36463882298521 40.0 37.0 41.0 34.0 41.0 17 38.22856887058508 40.0 37.0 41.0 34.0 41.0 18 38.15059363047187 40.0 37.0 41.0 34.0 41.0 19 38.03117616923069 40.0 37.0 41.0 34.0 41.0 20 38.04672446294721 40.0 37.0 41.0 34.0 41.0 21 37.97931868033484 40.0 36.0 41.0 33.0 41.0 22 37.96701831873505 40.0 36.0 41.0 33.0 41.0 23 37.92206952464797 40.0 36.0 41.0 33.0 41.0 24 37.86063735072196 40.0 36.0 41.0 33.0 41.0 25 37.763234204256634 40.0 36.0 41.0 33.0 41.0 26 37.62036995588184 40.0 36.0 41.0 33.0 41.0 27 37.4800473511696 40.0 35.0 41.0 33.0 41.0 28 37.39370110071574 40.0 35.0 41.0 33.0 41.0 29 37.31659628651437 40.0 35.0 41.0 32.0 41.0 30 37.20675848416571 39.0 35.0 41.0 32.0 41.0 31 37.11592083600679 39.0 35.0 41.0 32.0 41.0 32 36.965665428174944 39.0 35.0 41.0 31.0 41.0 33 36.850416063585854 39.0 35.0 41.0 31.0 41.0 34 36.69896692878921 39.0 35.0 41.0 31.0 41.0 35 36.60054414054145 39.0 35.0 41.0 30.0 41.0 36 36.42390239292518 39.0 35.0 41.0 30.0 41.0 37 36.32747909734346 39.0 35.0 41.0 30.0 41.0 38 36.23213512989241 39.0 35.0 41.0 30.0 41.0 39 36.14304330741951 39.0 35.0 41.0 29.0 41.0 40 35.95191767263033 39.0 35.0 40.0 29.0 41.0 41 35.83073946411607 38.0 35.0 40.0 28.0 41.0 42 35.762970589551905 38.0 35.0 40.0 28.0 41.0 43 35.70763139700872 38.0 35.0 40.0 28.0 41.0 44 35.52068878045869 38.0 35.0 40.0 27.0 41.0 45 35.40815514471453 38.0 34.0 40.0 27.0 41.0 46 35.28208265564459 38.0 34.0 40.0 26.0 41.0 47 35.1519763642061 38.0 34.0 40.0 26.0 41.0 48 35.08088494958991 38.0 34.0 40.0 26.0 41.0 49 34.90671521156324 37.0 34.0 40.0 25.0 41.0 50 34.72865093931391 37.0 34.0 40.0 24.0 41.0 51 32.6252343932634 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 14.0 9 25.0 10 21.0 11 11.0 12 5.0 13 5.0 14 15.0 15 21.0 16 32.0 17 61.0 18 98.0 19 158.0 20 290.0 21 462.0 22 684.0 23 926.0 24 1289.0 25 1703.0 26 2068.0 27 2443.0 28 2710.0 29 3189.0 30 3901.0 31 4861.0 32 6200.0 33 8861.0 34 14274.0 35 17871.0 36 18521.0 37 29555.0 38 38148.0 39 42620.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.113185211712455 19.784034896618273 23.636788675510196 12.465991216159084 2 32.136124664886026 25.533819777071486 24.532083899110177 17.797971658932312 3 33.17168280685001 24.090902308369518 26.429115000671473 16.308299884109008 4 29.799404131290068 25.220466448811496 26.19086699394681 18.789262425951627 5 25.88397968674615 30.204276526851398 24.075483335074185 19.83626045132827 6 26.720085948341467 36.094324325668616 23.600976866566196 13.584612859423729 7 60.29564637828213 28.886203003218093 6.808720175477864 4.00943044302192 8 81.6932022223217 6.525707407573203 7.936294770978508 3.8447955991265896 9 75.05060904944516 8.857454078815822 9.969112314785802 6.122824556953211 10 43.87742413616446 26.009321018050148 16.37445225340834 13.73880259237706 11 33.84365161078532 26.065525662642813 22.594764512486883 17.496058214084982 12 33.10254612013867 22.174970529865558 26.191861766417475 18.530621583578295 13 26.753410826108798 23.95312632118219 27.11550800543146 22.177954847277555 14 20.762891007754252 26.990166674127458 28.71062566214543 23.536316655972865 15 21.88201003725423 25.302535177641495 32.27837712819135 20.53707765691292 16 24.922034707611502 25.102088524802163 29.72330403728407 20.252572730302262 17 23.773072503991525 24.71959850983084 27.693470810888783 23.813858175288857 18 24.66886511382684 25.80738220650482 27.997373800677437 21.526378878990904 19 27.519385628522112 26.583802119860135 25.0220093409135 20.874802910704247 20 29.098089539470084 25.853141740155483 26.09984531288081 18.94892340749362 21 27.39752600086545 26.559927580564135 26.109793037587476 19.932753380982934 22 25.35127902870416 24.617136945352176 26.641498923158803 23.390085102784866 23 25.769083466384153 25.912330702160148 27.44079860333945 20.877787228116247 24 25.668611446846818 23.578594485976197 28.152060919866102 22.60073314731088 25 24.707163853947506 26.137646666766145 25.605940781194818 23.549248698091528 26 22.771336626030212 27.689491721006114 26.5251105440908 23.014061108872873 27 23.194612312298872 27.401505090748117 27.059800747074124 22.344081849878886 28 21.786014493834898 28.984188091578755 27.39454168345345 21.835255731132897 29 23.90537724259019 27.51839085605145 26.982208494362126 21.594023406996236 30 23.939199506592853 26.208275512183477 28.157532168454768 21.6949928127689 31 25.049862970092168 26.918045670004126 26.26249061183481 21.7696007480689 32 26.095866222998144 27.413442360396118 25.466175249066158 21.02451616753958 33 26.136154508060145 26.872286136353463 25.047873425150836 21.94368593043556 34 24.205301142496182 27.61538117194145 27.189618554496125 20.989699131066246 35 23.618385384802863 26.612153135274134 27.06328245072146 22.706179029201547 36 23.86956543364619 29.90087092329807 25.020517182207502 21.209046460848242 37 24.032210732600188 29.51639136338541 26.7429657151668 19.708432188847606 38 24.362972579096844 28.179417162809433 24.957846516555502 22.499763741538217 39 25.442798096005493 27.231398998264122 24.926511183729502 22.399291722000886 40 25.596987828958824 25.622851913196154 26.920035214945457 21.860125042899565 41 21.689521564180232 26.700190498928134 27.591506632645448 24.018781304246186 42 23.07523961581887 26.42264897961214 26.378878990902805 24.123232413666184 43 24.111792530253517 26.233144823950145 26.464429423380135 23.190633222416203 44 22.71264505026088 26.817573650466798 26.55594849068147 23.913832808590854 45 23.217989465359537 27.02448632436546 25.470154338948824 24.28736987132618 46 22.32916026281889 28.83397744850809 25.233895877165498 23.602966411507527 47 22.394815245882885 26.118248603588146 28.136641946570773 23.3502942039582 48 23.251811729362203 25.040412631620836 28.553451611780094 23.154324027236868 49 22.900657047216875 26.269454019129473 28.028709133503437 22.801179800150212 50 21.092658081780243 26.276417426424143 27.51242222122745 25.118502270568165 51 21.27917792003024 25.61190941601882 27.06228767825079 26.046624985700145 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 117.0 1 316.0 2 515.0 3 1029.5 4 1544.0 5 1101.5 6 659.0 7 605.5 8 552.0 9 520.0 10 488.0 11 498.5 12 509.0 13 497.5 14 486.0 15 497.5 16 509.0 17 504.0 18 499.0 19 489.0 20 479.0 21 639.5 22 800.0 23 888.0 24 976.0 25 1173.0 26 1766.0 27 2162.0 28 2444.5 29 2727.0 30 3255.0 31 3783.0 32 4287.0 33 4791.0 34 5371.0 35 5951.0 36 6091.0 37 6231.0 38 6653.0 39 7075.0 40 8197.5 41 9320.0 42 10456.0 43 11592.0 44 13109.5 45 14627.0 46 14112.5 47 13598.0 48 13504.5 49 13411.0 50 12440.0 51 11469.0 52 10985.5 53 10502.0 54 10442.5 55 10383.0 56 10652.0 57 10921.0 58 11052.0 59 11183.0 60 11090.0 61 10997.0 62 10152.0 63 9307.0 64 7949.5 65 6592.0 66 5460.0 67 4328.0 68 3786.0 69 3244.0 70 2851.5 71 2459.0 72 2168.0 73 1877.0 74 1543.5 75 989.5 76 769.0 77 594.0 78 419.0 79 360.5 80 302.0 81 223.5 82 145.0 83 113.0 84 81.0 85 60.0 86 39.0 87 30.0 88 21.0 89 18.5 90 16.0 91 12.5 92 9.0 93 6.5 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 201051.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.75010320764383 #Duplication Level Percentage of deduplicated Percentage of total 1 66.53641334778827 27.77902124336611 2 9.948891456891314 8.307344902537167 3 5.744647899069562 7.1951892803318565 4 4.110127592656572 6.863930047599863 5 3.0891480718140554 6.448612541096538 6 2.3314549851678 5.840309175283883 7 1.8203695540809397 5.320043173125226 8 1.4998987359868476 5.009674162277234 9 1.1389223126317922 4.279511168807915 >10 3.728898366671035 20.36000815713426 >50 0.033357557273734496 0.9082272657186484 >100 0.016678778636867248 1.3548801050479728 >500 0.0011913413312048034 0.33324877767332667 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 670 0.33324877767332667 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 355 0.1765721135433298 No Hit GAATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTC 339 0.16861393377799663 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCG 324 0.1611531402479968 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGC 319 0.15866620907133017 No Hit GCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCAGAAGCTAATGGCTG 216 0.10743542683199785 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06217327941666542 0.0 2 0.0 0.0 0.0 0.25814345613799483 0.0 3 0.0 0.0 0.0 0.3382226400266599 0.0 4 0.0 0.0 0.0 0.45660056403599086 0.0 5 0.0 0.0 0.0 0.9306096463086481 0.0 6 0.0 0.0 0.0 1.2111354830366425 0.0 7 0.0 0.0 0.0 1.4245141779946382 0.0 8 0.0 0.0 0.0 1.8204336213199637 0.0 9 0.0 0.0 0.0 1.9795972166266271 0.0 10 0.0 0.0 0.0 2.556565249613282 0.0 11 0.0 0.0 0.0 3.094737156243938 0.0 12 0.0 0.0 0.0 3.723930743940592 0.0 13 0.0 0.0 0.0 3.9596918194885875 0.0 14 0.0 0.0 0.0 4.080556674674585 0.0 15 0.0 0.0 0.0 4.262102650571248 0.0 16 0.0 0.0 0.0 4.568989957771908 0.0 17 0.0 0.0 0.0 4.8957727143859024 0.0 18 0.0 0.0 0.0 5.250409100178562 0.0 19 0.0 0.0 0.0 5.491641424315223 0.0 20 0.0 0.0 0.0 5.740334541981885 0.0 21 0.0 0.0 0.0 6.013896971415213 0.0 22 0.0 0.0 0.0 6.306360077791207 0.0 23 0.0 0.0 0.0 6.602802274049868 0.0 24 0.0 0.0 0.0 6.84851107430453 0.0 25 0.0 0.0 0.0 7.068355790321859 0.0 26 0.0 0.0 0.0 7.270791988102522 0.0 27 0.0 0.0 0.0 7.497600111414517 0.0 28 0.0 0.0 0.0 7.736345504374512 0.0 29 0.0 0.0 0.0 7.961164082745174 0.0 30 0.0 0.0 0.0 8.261087982651167 0.0 31 0.0 0.0 0.0 8.525697459848496 0.0 32 0.0 0.0 0.0 8.779364439868491 0.0 33 0.0 0.0 0.0 9.01711506035782 0.0 34 0.0 0.0 0.0 9.289682717320481 0.0 35 0.0 0.0 0.0 9.53638629004581 0.0 36 0.0 0.0 0.0 9.80298531218447 0.0 37 0.0 0.0 0.0 10.069086948087799 0.0 38 0.0 0.0 0.0 10.405320043173125 0.0 39 0.0 0.0 0.0 10.70375178437312 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGGGC 30 2.156541E-6 45.000004 4 ATAGGAT 25 3.879293E-5 45.0 5 AGGAACG 25 3.879293E-5 45.0 7 AACGGGA 25 3.879293E-5 45.0 4 CCCCATT 55 1.8189894E-12 45.0 42 GTATCCT 20 7.019393E-4 45.0 12 GTAAGGC 20 7.019393E-4 45.0 4 GTAAGCA 20 7.019393E-4 45.0 1 GCGCTTT 20 7.019393E-4 45.0 40 GATTCAT 55 1.8189894E-12 45.0 45 TAAACCA 65 0.0 41.53846 31 ACGGGAG 65 0.0 41.53846 5 CGAATAT 65 0.0 41.53846 14 CTCGTCC 60 3.6379788E-12 41.250004 37 AGGCGAT 60 3.6379788E-12 41.250004 7 TGATTCA 60 3.6379788E-12 41.250004 44 TAGGGCG 55 6.002665E-11 40.909092 5 TGCCAAT 50 1.0713848E-9 40.5 14 TAATGGC 50 1.0713848E-9 40.5 43 GGTATGC 45 1.9146682E-8 40.0 8 >>END_MODULE