SRR3551135_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551135_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	820364
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11292	1.3764621558235124	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3434	0.4185946726087444	No Hit
GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC	2502	0.30498656693857845	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2274	0.2771940260664778	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG	2068	0.2520832215943167	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC	1704	0.2077126738862261	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1634	0.19917987625005487	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGCGA	30	2.1647393E-6	45.000004	27
CGAATAT	70	0.0	45.0	14
CGTTATT	1215	0.0	43.14815	1
CGTTTTT	4740	0.0	43.10127	1
CGTTTTA	530	0.0	42.0283	1
CGGTTTT	1250	0.0	41.76	1
ACGGGTA	60	3.6379788E-12	41.250004	5
ATTAGCG	45	1.9272193E-8	40.0	1
CGCACGG	40	3.4566074E-7	39.375	2
CACGACC	35	6.246104E-6	38.571426	27
TACGACG	35	6.246104E-6	38.571426	1
TTAACGG	70	0.0	38.571426	2
GTTATTT	1425	0.0	38.052635	2
TTACGGG	315	0.0	37.857143	3
CTAGACG	30	1.13963695E-4	37.500004	1
TCGTCAC	30	1.13963695E-4	37.500004	27
TATTACG	30	1.13963695E-4	37.500004	1
TACGTGC	30	1.13963695E-4	37.500004	16
AAGGGCG	210	0.0	37.5	5
TTTACGG	85	0.0	37.058823	2