##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551132_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 390510 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.000678599779775 33.0 31.0 34.0 30.0 34.0 2 32.14136641827354 33.0 31.0 34.0 30.0 34.0 3 32.0705231620189 33.0 31.0 34.0 30.0 34.0 4 35.78108371104453 37.0 35.0 37.0 35.0 37.0 5 31.3807252055005 37.0 35.0 37.0 0.0 37.0 6 33.54139970807406 37.0 35.0 37.0 17.0 37.0 7 29.406089472740774 35.0 32.0 37.0 0.0 37.0 8 32.52317994417557 35.0 33.0 37.0 17.0 37.0 9 36.44662620675527 39.0 35.0 39.0 32.0 39.0 10 36.905853883383266 38.0 37.0 39.0 34.0 39.0 11 37.042313897211336 39.0 37.0 39.0 34.0 39.0 12 37.06275639548283 39.0 37.0 39.0 34.0 39.0 13 36.85071060920335 39.0 37.0 39.0 33.0 39.0 14 38.13872884177102 40.0 37.0 41.0 33.0 41.0 15 38.21679598473791 40.0 37.0 41.0 33.0 41.0 16 38.269716524544826 40.0 37.0 41.0 34.0 41.0 17 38.257701467311975 40.0 37.0 41.0 34.0 41.0 18 38.162633479296304 40.0 37.0 41.0 33.0 41.0 19 38.096158869171084 40.0 37.0 41.0 34.0 41.0 20 38.03500294486697 40.0 37.0 41.0 34.0 41.0 21 37.947284320503954 40.0 37.0 41.0 33.0 41.0 22 37.933371744641626 40.0 36.0 41.0 33.0 41.0 23 37.89432280863486 40.0 36.0 41.0 33.0 41.0 24 37.8332309031779 40.0 36.0 41.0 33.0 41.0 25 37.70110624567873 40.0 36.0 41.0 33.0 41.0 26 37.565770402806585 40.0 36.0 41.0 33.0 41.0 27 37.52814012445264 40.0 36.0 41.0 33.0 41.0 28 37.40282195078231 40.0 36.0 41.0 32.0 41.0 29 37.387598268930375 40.0 36.0 41.0 32.0 41.0 30 37.30054287982382 39.0 36.0 41.0 32.0 41.0 31 37.18202862922845 39.0 35.0 41.0 32.0 41.0 32 37.091377941666025 39.0 35.0 41.0 31.0 41.0 33 36.93640367724258 39.0 35.0 41.0 31.0 41.0 34 36.774169675552486 39.0 35.0 41.0 31.0 41.0 35 36.705520985378094 39.0 35.0 41.0 30.0 41.0 36 36.59881181019692 39.0 35.0 41.0 30.0 41.0 37 36.483175846969345 39.0 35.0 41.0 30.0 41.0 38 36.420352871885484 39.0 35.0 41.0 30.0 41.0 39 36.380914701288056 39.0 35.0 41.0 30.0 41.0 40 36.20787431819928 39.0 35.0 40.0 30.0 41.0 41 36.114253156129166 39.0 35.0 40.0 29.0 41.0 42 36.06886123274692 39.0 35.0 40.0 29.0 41.0 43 35.94299249699112 39.0 35.0 40.0 29.0 41.0 44 35.788870963611686 38.0 35.0 40.0 28.0 41.0 45 35.67067680725206 38.0 35.0 40.0 28.0 41.0 46 35.57649484008092 38.0 34.0 40.0 27.0 41.0 47 35.42995057745 38.0 34.0 40.0 27.0 41.0 48 35.35535069524468 38.0 34.0 40.0 27.0 41.0 49 35.20454277739366 38.0 34.0 40.0 26.0 41.0 50 35.026601111367185 38.0 34.0 40.0 26.0 41.0 51 33.08550613300556 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 20.0 10 18.0 11 21.0 12 13.0 13 14.0 14 15.0 15 30.0 16 49.0 17 94.0 18 163.0 19 259.0 20 450.0 21 684.0 22 1062.0 23 1582.0 24 2156.0 25 2848.0 26 3690.0 27 4380.0 28 5168.0 29 6145.0 30 7756.0 31 9818.0 32 13164.0 33 18682.0 34 27578.0 35 33387.0 36 38357.0 37 60840.0 38 77312.0 39 74739.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.478579293744076 20.851194591687793 25.695116642339507 11.975109472228624 2 30.66963714117436 26.561163606565774 26.26616475890502 16.503034493354843 3 32.67317098153696 24.459808967760107 27.037207753962768 15.829812296740162 4 29.56492791477811 26.382679060715475 25.95964251875752 18.092750505748892 5 22.475992932319276 40.08373665207037 20.64633428081227 16.793936134798084 6 26.001126731709817 36.19343934854421 23.330516504058796 14.474917415687177 7 69.79462753834729 20.15748636398556 6.072827840516248 3.9750582571509057 8 83.93075721492409 6.198816931704694 6.720186422882897 3.1502394304883357 9 77.21466799825869 9.314998335509975 8.206447978284807 5.263885687946532 10 41.53337942690328 31.099331643235768 14.353025530716243 13.014263399144706 11 31.226345035978593 26.86742977132468 24.012189188497093 17.894036004199638 12 31.483444726127374 23.417582136180894 26.539909349312435 18.559063788379298 13 25.97705564518194 25.90253770710097 27.35218048193388 20.768226165783208 14 20.54031906993419 29.452766894573763 27.56907633607334 22.437837699418708 15 20.95695372717728 28.465852346930937 31.399708074057003 19.17748585183478 16 22.94333051650406 27.310952344370182 30.508053570971295 19.237663568154463 17 22.9597193413741 26.687408773142813 27.669713963790937 22.683157921692146 18 23.449847635143787 28.19569281196384 27.27612609152135 21.078333461371027 19 25.793961742336947 28.951371283705924 25.219072494942512 20.03559447901462 20 27.306599062764075 27.981869862487518 26.515326112007376 18.19620496274103 21 25.999334203989655 27.289442011728255 26.766792143607077 19.944431640675013 22 24.139714732017108 26.45566054646488 25.92635271824025 23.478272003277763 23 25.33712324908453 27.183938951627358 26.71864997055133 20.760287828736782 24 24.113595042380474 26.48306061304448 27.306855138152674 22.09648920642237 25 23.314383754577346 28.2522854728432 25.978336022124914 22.454994750454535 26 22.024019871450154 30.492432972267036 25.819057130419193 21.664490025863614 27 22.642185859517042 29.864023968656372 26.513021433510026 20.98076873831656 28 21.16744769660188 29.560574633172003 28.4264167370874 20.845560933138714 29 23.10670661442729 28.127576758597733 27.809787201352076 20.955929425622905 30 23.251133133594532 28.049729840465034 26.725820081431973 21.973316944508465 31 24.224219610253257 28.092494430360297 25.399093493124376 22.284192466262066 32 25.698957773168416 29.037668689662237 25.575785511254512 19.687588025914827 33 24.888223092878544 29.834063148190825 24.398863025274643 20.878850733655987 34 21.99098614632148 28.513994519986685 27.70991779980026 21.785101533891577 35 23.999385419067373 27.54423702337968 26.223656244398352 22.232721313154595 36 23.439348544211416 29.67862538731402 25.628280965916368 21.253745102558195 37 23.82704668254334 30.24660059921641 26.034160456838496 19.892192261401757 38 23.851373844459808 28.368031548487878 25.321758725768866 22.458835881283452 39 24.815497682517734 26.40342116719162 26.814166090497043 21.966915059793603 40 23.82115694860567 27.213387621315714 28.4719981562572 20.493457273821413 41 21.06988297354741 28.128857135540702 28.97953957645131 21.821720314460578 42 22.332334639317818 28.173414253156132 26.670251722106986 22.823999385419068 43 24.576579344959157 27.225935315356843 25.975263117461783 22.22222222222222 44 23.017848454585028 28.447158843563546 25.610099613326163 22.924893088525263 45 22.851911602775857 28.372384830093978 25.64646231850657 23.129241248623593 46 22.11902384061868 29.815113569434843 25.591662185347364 22.474200404599117 47 22.460116258226424 27.665872832962023 28.179560062482395 21.694450846329158 48 22.916698676090242 26.090497042329265 27.909912678292486 23.082891603288008 49 22.103915392691608 26.90353640111649 27.87098921922614 23.121558986965763 50 20.2699034595785 27.348083275716373 28.703746382935137 23.678266881769993 51 21.545158894778623 26.334536887659727 27.075106911474737 25.045197306086912 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 198.0 1 480.0 2 762.0 3 1279.5 4 1797.0 5 1444.5 6 1092.0 7 930.5 8 769.0 9 771.0 10 773.0 11 764.0 12 755.0 13 757.0 14 759.0 15 786.0 16 813.0 17 830.5 18 848.0 19 985.5 20 1123.0 21 1393.5 22 1664.0 23 1794.5 24 1925.0 25 2444.5 26 3503.5 27 4043.0 28 5389.0 29 6735.0 30 7905.5 31 9076.0 32 10035.5 33 10995.0 34 11978.5 35 12962.0 36 13332.0 37 13702.0 38 15362.0 39 17022.0 40 18941.0 41 20860.0 42 21762.5 43 22665.0 44 24821.0 45 26977.0 46 28764.0 47 30551.0 48 29931.5 49 29312.0 50 28386.0 51 27460.0 52 25523.5 53 23587.0 54 22370.5 55 21154.0 56 20290.5 57 19427.0 58 19251.5 59 19076.0 60 18898.5 61 18721.0 62 16346.5 63 13972.0 64 11744.0 65 9516.0 66 7843.5 67 6171.0 68 4967.0 69 3763.0 70 3226.5 71 2690.0 72 2162.0 73 1634.0 74 1296.0 75 749.5 76 541.0 77 423.0 78 305.0 79 248.0 80 191.0 81 141.0 82 91.0 83 71.5 84 52.0 85 38.5 86 25.0 87 18.0 88 11.0 89 9.5 90 8.0 91 6.0 92 4.0 93 3.5 94 3.0 95 5.5 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 390510.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.36488842569341 #Duplication Level Percentage of deduplicated Percentage of total 1 70.68495065221143 25.704503438433136 2 9.06362112380906 6.5919514180014875 3 4.648537557337452 5.071306488456654 4 2.989461544871339 4.348457421285892 5 2.064080187712361 3.753002286392216 6 1.558122821395426 3.3996577532142767 7 1.1123646689708728 2.8315711953066423 8 0.8929139905117712 2.597657411096098 9 0.7728396508305688 2.529380490606494 >10 6.136334186449263 39.86633042697452 >50 0.05564326290034356 1.366220408198073 >100 0.01831297260011307 1.2986009504244902 >500 0.0028173804000173955 0.641360311610044 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 727 0.1861668075081304 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 671 0.17182658574684387 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 592 0.1515966300478861 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG 514 0.13162274973752272 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 494 0.12650124196563467 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC 446 0.11420962331310337 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.560753885944022E-4 0.0 0.0 0.04481319300402038 0.0 2 2.560753885944022E-4 0.0 0.0 0.20562853704130496 0.0 3 2.560753885944022E-4 0.0 0.0 0.28680443522573046 0.0 4 2.560753885944022E-4 0.0 0.0 0.43737676371923895 0.0 5 2.560753885944022E-4 0.0 0.0 0.9272489821003304 0.0 6 2.560753885944022E-4 0.0 0.0 1.201505723284935 0.0 7 2.560753885944022E-4 0.0 0.0 1.4831886507387775 0.0 8 2.560753885944022E-4 0.0 0.0 1.9523187626437224 0.0 9 2.560753885944022E-4 0.0 0.0 2.139253796317636 0.0 10 2.560753885944022E-4 0.0 0.0 2.7469206934521524 0.0 11 2.560753885944022E-4 0.0 0.0 3.349466082814781 0.0 12 2.560753885944022E-4 0.0 0.0 3.9809479910885766 0.0 13 2.560753885944022E-4 0.0 0.0 4.196051317507874 0.0 14 2.560753885944022E-4 0.0 0.0 4.298225397557041 0.0 15 2.560753885944022E-4 0.0 0.0 4.502317482266779 0.0 16 2.560753885944022E-4 0.0 0.0 4.858006197024404 0.0 17 2.560753885944022E-4 0.0 0.0 5.272336175770147 0.0 18 2.560753885944022E-4 0.0 0.0 5.760928017208266 0.0 19 2.560753885944022E-4 0.0 0.0 6.038769813833192 0.0 20 2.560753885944022E-4 0.0 0.0 6.3396583954316155 0.0 21 2.560753885944022E-4 0.0 0.0 6.6746050037130935 0.0 22 2.560753885944022E-4 0.0 0.0 7.062047066656423 0.0 23 2.560753885944022E-4 0.0 0.0 7.449489129599754 0.0 24 2.560753885944022E-4 0.0 0.0 7.758828199021792 0.0 25 2.560753885944022E-4 0.0 0.0 8.02335407543981 0.0 26 2.560753885944022E-4 0.0 0.0 8.264321016107141 0.0 27 2.560753885944022E-4 0.0 0.0 8.508873012214796 0.0 28 2.560753885944022E-4 0.0 0.0 8.781081150290646 0.0 29 2.560753885944022E-4 0.0 0.0 9.074287470231235 0.0 30 2.560753885944022E-4 0.0 0.0 9.399247138357532 0.0 31 2.560753885944022E-4 0.0 0.0 9.70858620777957 0.0 32 2.560753885944022E-4 0.0 0.0 10.015876674092853 0.0 33 2.560753885944022E-4 0.0 0.0 10.296023149215129 0.0 34 2.560753885944022E-4 0.0 0.0 10.59793603236793 0.0 35 2.560753885944022E-4 0.0 0.0 10.89344703080587 0.0 36 2.560753885944022E-4 0.0 0.0 11.222503905149676 0.0 37 2.560753885944022E-4 0.0 0.0 11.540805613172518 0.0 38 2.560753885944022E-4 0.0 0.0 11.833755857724514 0.0 39 2.560753885944022E-4 0.0 0.0 12.157691224296434 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTA 20 7.027559E-4 45.000004 39 CAACGTG 20 7.027559E-4 45.000004 18 CAGCACG 20 7.027559E-4 45.000004 1 AACGGGC 40 6.7957444E-9 45.000004 4 GTCGTTT 20 7.027559E-4 45.000004 9 GCTAGCG 20 7.027559E-4 45.000004 1 CTTTCGT 20 7.027559E-4 45.000004 15 CAATGCG 20 7.027559E-4 45.000004 1 CCAACGG 20 7.027559E-4 45.000004 2 TTCGCAG 20 7.027559E-4 45.000004 1 TCGAATA 20 7.027559E-4 45.000004 14 TGACTAC 20 7.027559E-4 45.000004 4 TCGTTCC 25 3.886059E-5 45.0 38 CGTTCCA 25 3.886059E-5 45.0 39 TTGCGGA 25 3.886059E-5 45.0 1 GCTAGTA 25 3.886059E-5 45.0 12 TCCGAAC 30 2.161807E-6 44.999996 35 CGTTGAT 65 0.0 41.53846 25 ACGGGTC 55 6.002665E-11 40.909092 5 CGGGGTA 55 6.002665E-11 40.909092 6 >>END_MODULE