SRR3551129_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551129_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	348231
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG	476	0.1366908747354486	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	388	0.11142029285158415	No Hit
GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC	382	0.10969729863222975	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTCGCA	20	7.026505E-4	45.000004	9
TTTACGT	20	7.026505E-4	45.000004	11
TCCGACG	20	7.026505E-4	45.000004	29
TGAACGG	40	6.7921064E-9	45.000004	2
GGATACG	20	7.026505E-4	45.000004	1
TGTGACA	20	7.026505E-4	45.000004	42
ACGATGG	30	2.1611268E-6	45.000004	2
ATATCGA	30	2.1611268E-6	45.000004	18
CCATACC	20	7.026505E-4	45.000004	20
TTACGTT	20	7.026505E-4	45.000004	12
CGAGATC	20	7.026505E-4	45.000004	15
ATGCGAG	20	7.026505E-4	45.000004	1
ACGTATG	20	7.026505E-4	45.000004	1
ACCCGGC	30	2.1611268E-6	45.000004	41
TATCGAG	20	7.026505E-4	45.000004	19
GTAGTAC	20	7.026505E-4	45.000004	38
TGCGTAG	30	2.1611268E-6	45.000004	1
TTGGCCG	25	3.885187E-5	45.0	1
CCCGGCT	35	1.2086639E-7	45.0	42
ACGGGTG	60	3.6379788E-12	41.250004	5