##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551129_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 348231 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.918407608742474 31.0 31.0 34.0 30.0 34.0 2 32.05227277295818 33.0 31.0 34.0 30.0 34.0 3 31.99485973391226 33.0 31.0 34.0 30.0 34.0 4 35.71035031344137 37.0 35.0 37.0 35.0 37.0 5 31.08750226142991 37.0 35.0 37.0 0.0 37.0 6 33.34914754860998 37.0 35.0 37.0 17.0 37.0 7 29.614353690510036 35.0 32.0 37.0 0.0 37.0 8 32.617805422262805 35.0 33.0 37.0 17.0 37.0 9 36.44500920366079 39.0 35.0 39.0 32.0 39.0 10 36.829848577524686 38.0 37.0 39.0 33.0 39.0 11 36.9718778626831 39.0 37.0 39.0 33.0 39.0 12 36.94140383825679 39.0 35.0 39.0 33.0 39.0 13 36.69770927918537 39.0 35.0 39.0 33.0 39.0 14 37.95030884671382 40.0 37.0 41.0 33.0 41.0 15 38.03821026847122 40.0 37.0 41.0 33.0 41.0 16 38.11073109516384 40.0 37.0 41.0 33.0 41.0 17 38.070789217502174 40.0 37.0 41.0 33.0 41.0 18 37.99088823223665 40.0 37.0 41.0 33.0 41.0 19 37.92111845298092 40.0 36.0 41.0 33.0 41.0 20 37.848663674400036 40.0 36.0 41.0 33.0 41.0 21 37.758350060735545 40.0 36.0 41.0 33.0 41.0 22 37.75349121703697 40.0 36.0 41.0 33.0 41.0 23 37.7241428821673 40.0 36.0 41.0 33.0 41.0 24 37.65178573992551 40.0 36.0 41.0 33.0 41.0 25 37.52034138258799 39.0 36.0 41.0 33.0 41.0 26 37.34958978379294 39.0 35.0 41.0 32.0 41.0 27 37.315066722951144 39.0 35.0 41.0 32.0 41.0 28 37.213194689731814 39.0 35.0 41.0 32.0 41.0 29 37.188512797539566 39.0 35.0 41.0 32.0 41.0 30 37.031734681863476 39.0 35.0 41.0 31.0 41.0 31 36.922241270880534 39.0 35.0 41.0 31.0 41.0 32 36.816159388451915 39.0 35.0 41.0 31.0 41.0 33 36.62634573027674 39.0 35.0 41.0 30.0 41.0 34 36.480040547797294 39.0 35.0 41.0 30.0 41.0 35 36.363115288414875 39.0 35.0 41.0 30.0 41.0 36 36.25553727267245 39.0 35.0 40.0 30.0 41.0 37 36.12890868417803 39.0 35.0 40.0 29.0 41.0 38 36.0642389678116 39.0 35.0 40.0 29.0 41.0 39 36.07323874095069 39.0 35.0 40.0 29.0 41.0 40 35.89685295105835 39.0 35.0 40.0 28.0 41.0 41 35.77942802335232 38.0 35.0 40.0 28.0 41.0 42 35.708707725618915 38.0 35.0 40.0 27.0 41.0 43 35.516590998503865 38.0 34.0 40.0 27.0 41.0 44 35.35953146043862 38.0 34.0 40.0 26.0 41.0 45 35.23206721974781 38.0 34.0 40.0 26.0 41.0 46 35.08489479684462 38.0 34.0 40.0 25.0 41.0 47 34.915090844870214 38.0 34.0 40.0 24.0 41.0 48 34.83044301053037 38.0 34.0 40.0 24.0 41.0 49 34.64082462503338 38.0 34.0 40.0 24.0 41.0 50 34.498984869239095 37.0 33.0 40.0 23.0 41.0 51 32.44201119371911 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 21.0 10 23.0 11 15.0 12 11.0 13 18.0 14 18.0 15 30.0 16 41.0 17 95.0 18 164.0 19 294.0 20 509.0 21 842.0 22 1163.0 23 1710.0 24 2322.0 25 3124.0 26 3830.0 27 4516.0 28 5341.0 29 6229.0 30 7681.0 31 9549.0 32 12736.0 33 17800.0 34 25476.0 35 30611.0 36 33361.0 37 52086.0 38 65576.0 39 63019.0 40 12.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.623718164092224 20.712687842265623 26.05425708796747 10.609336905674681 2 32.27857370538521 26.04535495116747 24.35251313065178 17.32355821279553 3 33.560481404584884 24.79532264502586 25.508355086135353 16.1358408642539 4 29.745485037231035 25.80786891459979 25.870758203606226 18.57588784456295 5 22.580987907452236 40.42862352863473 20.12887996760771 16.861508596305328 6 26.409481062857697 35.68522044275208 23.89505816541319 14.01024032897703 7 69.37119325964662 19.62949880969816 6.794340538320827 4.204967392334399 8 81.63144579316604 6.692396713675692 7.565667617185144 4.1104898759731325 9 75.07200680008386 8.987425013855745 9.773110377881348 6.167457808179053 10 40.154380282054156 29.321341293566626 16.429037047247373 14.095241377131845 11 32.489353331552906 26.30725007250934 23.94473783207124 17.258658763866514 12 32.69553830646898 22.656799653103832 26.477826500225426 18.169835540201763 13 25.426225695012793 25.815048057180434 27.44442625728324 21.314299990523534 14 20.28337511594315 29.348334869669845 27.83181279093475 22.53647722345225 15 19.97122599653678 27.958165700354076 33.216169726417235 18.85443857669191 16 22.902039163658607 25.60197110538694 30.892137690211385 20.60385204074307 17 22.70188466851027 26.038750139993283 27.07771565426398 24.18164953723247 18 23.663315442910022 27.57221499521869 27.802521889205728 20.96194767266556 19 26.160508398160992 28.464726000844266 25.18960115555479 20.185164445439952 20 27.139456280457512 26.745752101335036 27.592029428741267 18.52276218946619 21 25.509790914651482 27.860529361257324 26.120879531115836 20.50880019297535 22 24.202612633567945 25.981029833644907 26.48902596265123 23.327331570135915 23 24.140872007374416 27.273275498160704 27.34276959834133 21.24308289612355 24 23.556776967013278 24.98226751782581 29.571175455373016 21.8897800597879 25 22.65076917333609 27.450743902754205 26.15591374690938 23.742573177000324 26 21.324063624433208 29.370159463115 27.031769141747862 22.27400777070393 27 21.52507961669122 29.567729466934306 27.600644399838036 21.306546516536436 28 19.512909534188513 29.412947152895637 29.227438108611814 21.84670520430404 29 22.72198626773607 27.22359583150265 27.787876438341215 22.26654146242006 30 22.247014194600713 28.864460659734487 26.896514095528545 21.99201105013626 31 24.19227466825182 28.23097311841852 25.467864721980526 22.108887491349133 32 25.33749149271604 29.078399108637658 25.00466644267742 20.579442955968883 33 23.856865126884166 29.081845097076364 25.88856247720622 21.172727298833248 34 22.746682518213486 27.664969517360603 27.820613328508948 21.767734635916963 35 23.17771823875531 27.69856790463801 26.85717239418662 22.26654146242006 36 23.950481146135754 29.912328310805187 25.300734282703147 20.836456260355913 37 23.329628895761722 30.632252728792096 26.30523991258676 19.732878462859425 38 21.94146988636853 29.781667915837474 25.295565300045087 22.98129689774891 39 23.924923398548664 26.87842265622532 27.050434912457533 22.146219032768478 40 23.659295123064865 26.500512590780257 28.011578521154064 21.828613765000817 41 21.437206911504145 27.822910654134752 27.79821440365734 22.941668030703756 42 22.324261768768434 27.451031068457432 26.267046874057737 23.957660288716397 43 22.72141193632962 27.420591503915503 26.474380511786716 23.383616047968157 44 21.786974738033088 27.90446571385086 26.431305656302857 23.877253891813194 45 22.427928587632923 28.203118045205628 25.829119176638493 23.539834190522956 46 22.34120454525875 30.017718123889026 25.071288885825787 22.569788445026433 47 21.896097705258867 27.05474239800592 28.37455597003139 22.674603926703828 48 22.20049335067814 25.762209567786897 29.002874528689286 23.03442255284567 49 21.364841154291263 26.74115745008342 28.20771269645724 23.68628869916808 50 20.26356068242058 27.203781397980077 28.045176908431475 24.487481011167876 51 20.087528106343203 26.307537238212564 27.397331081954217 26.20760357349001 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 176.0 1 421.5 2 667.0 3 947.5 4 1228.0 5 1027.0 6 826.0 7 695.5 8 565.0 9 594.5 10 624.0 11 668.0 12 712.0 13 722.5 14 733.0 15 820.5 16 908.0 17 925.0 18 942.0 19 1062.5 20 1183.0 21 1218.5 22 1254.0 23 1483.0 24 1712.0 25 2212.5 26 3103.5 27 3494.0 28 4296.0 29 5098.0 30 6189.5 31 7281.0 32 8301.5 33 9322.0 34 10236.5 35 11151.0 36 11960.5 37 12770.0 38 13998.5 39 15227.0 40 16796.5 41 18366.0 42 19747.0 43 21128.0 44 23047.0 45 24966.0 46 26981.5 47 28997.0 48 28138.5 49 27280.0 50 26348.5 51 25417.0 52 23311.5 53 21206.0 54 19989.0 55 18772.0 56 17663.5 57 16555.0 58 16622.5 59 16690.0 60 16108.0 61 15526.0 62 13701.0 63 11876.0 64 10242.0 65 8608.0 66 6969.0 67 5330.0 68 4298.0 69 3266.0 70 2641.5 71 2017.0 72 1687.5 73 1358.0 74 1158.0 75 730.0 76 502.0 77 418.0 78 334.0 79 259.5 80 185.0 81 149.0 82 113.0 83 114.0 84 115.0 85 74.5 86 34.0 87 23.5 88 13.0 89 14.5 90 16.0 91 13.0 92 10.0 93 8.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 348231.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.876363419948554 #Duplication Level Percentage of deduplicated Percentage of total 1 72.96376755460092 26.906384088321143 2 8.77834827908264 6.474271227326629 3 4.017072500028162 4.444050761859594 4 2.579961006411407 3.805583187268931 5 1.8753964986758798 3.457890142083541 6 1.3614182379946593 3.0122492226502247 7 1.0000007047943775 2.5813472587141515 8 0.7611761323262101 2.2455526145801743 9 0.6538555409024975 2.1700633095420785 >10 5.915708161001425 41.50149153228308 >50 0.07152646120607363 1.7910120328836863 >100 0.02176892297576154 1.6101046224867588 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 476 0.1366908747354486 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 388 0.11142029285158415 No Hit GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 382 0.10969729863222975 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06375078611611258 0.0 2 0.0 0.0 0.0 0.3311020558192694 0.0 3 0.0 0.0 0.0 0.4471169999224653 0.0 4 0.0 0.0 0.0 0.6260212330320966 0.0 5 0.0 0.0 0.0 1.2732927281028972 0.0 6 0.0 0.0 0.0 1.620188897599582 0.0 7 0.0 0.0 0.0 2.015041739534964 0.0 8 0.0 0.0 0.0 2.679256011096083 0.0 9 0.0 0.0 0.0 2.932248995637953 0.0 10 0.0 0.0 0.0 3.717647193960331 0.0 11 0.0 0.0 0.0 4.438433109056919 0.0 12 0.0 0.0 0.0 5.169556989469633 0.0 13 0.0 0.0 0.0 5.4308777794050505 0.0 14 0.0 0.0 0.0 5.534257432566314 0.0 15 0.0 0.0 0.0 5.761979835224319 0.0 16 0.0 0.0 0.0 6.2484385364887105 0.0 17 0.0 0.0 0.0 6.755286002682127 0.0 18 0.0 0.0 0.0 7.348283179843265 0.0 19 0.0 0.0 0.0 7.688861703868984 0.0 20 0.0 0.0 0.0 8.045234341572117 0.0 21 0.0 0.0 0.0 8.496371661339744 0.0 22 0.0 0.0 0.0 8.95210363235898 0.0 23 0.0 0.0 0.0 9.37739603883629 0.0 24 0.0 0.0 0.0 9.75616760139103 0.0 25 0.0 0.0 0.0 10.088705485726429 0.0 26 0.0 0.0 0.0 10.402577599352155 0.0 27 0.0 0.0 0.0 10.706398913364978 0.0 28 0.0 0.0 0.0 11.041808454732635 0.0 29 0.0 0.0 0.0 11.366592865080937 0.0 30 0.0 0.0 0.0 11.741631273493745 0.0 31 0.0 0.0 0.0 12.108054710809778 0.0 32 0.0 0.0 0.0 12.459258365854849 0.0 33 0.0 0.0 0.0 12.802134215506374 0.0 34 0.0 0.0 0.0 13.14012824820306 0.0 35 0.0 0.0 0.0 13.552498198035213 0.0 36 0.0 0.0 0.0 13.921506126680278 0.0 37 0.0 0.0 0.0 14.28132475282212 0.0 38 0.0 0.0 0.0 14.671582943505891 0.0 39 0.0 0.0 0.0 15.067871613957402 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGCA 20 7.026505E-4 45.000004 9 TTTACGT 20 7.026505E-4 45.000004 11 TCCGACG 20 7.026505E-4 45.000004 29 TGAACGG 40 6.7921064E-9 45.000004 2 GGATACG 20 7.026505E-4 45.000004 1 TGTGACA 20 7.026505E-4 45.000004 42 ACGATGG 30 2.1611268E-6 45.000004 2 ATATCGA 30 2.1611268E-6 45.000004 18 CCATACC 20 7.026505E-4 45.000004 20 TTACGTT 20 7.026505E-4 45.000004 12 CGAGATC 20 7.026505E-4 45.000004 15 ATGCGAG 20 7.026505E-4 45.000004 1 ACGTATG 20 7.026505E-4 45.000004 1 ACCCGGC 30 2.1611268E-6 45.000004 41 TATCGAG 20 7.026505E-4 45.000004 19 GTAGTAC 20 7.026505E-4 45.000004 38 TGCGTAG 30 2.1611268E-6 45.000004 1 TTGGCCG 25 3.885187E-5 45.0 1 CCCGGCT 35 1.2086639E-7 45.0 42 ACGGGTG 60 3.6379788E-12 41.250004 5 >>END_MODULE