##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551123_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 274188 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12114680438239 33.0 31.0 34.0 30.0 34.0 2 32.26497877368813 33.0 31.0 34.0 30.0 34.0 3 32.22150130567348 34.0 31.0 34.0 30.0 34.0 4 35.91382919748494 37.0 35.0 37.0 35.0 37.0 5 31.24844996863466 37.0 35.0 37.0 0.0 37.0 6 33.51298014500999 37.0 35.0 37.0 17.0 37.0 7 29.65378499423753 35.0 32.0 37.0 0.0 37.0 8 32.74884750609071 35.0 35.0 37.0 17.0 37.0 9 36.693947218696664 39.0 35.0 39.0 32.0 39.0 10 36.93108013479802 38.0 37.0 39.0 34.0 39.0 11 37.02963659970531 39.0 37.0 39.0 34.0 39.0 12 37.11983383663764 39.0 37.0 39.0 34.0 39.0 13 36.99257443797686 39.0 37.0 39.0 33.0 39.0 14 38.326170364859145 40.0 38.0 41.0 34.0 41.0 15 38.3614199016733 40.0 38.0 41.0 34.0 41.0 16 38.40711117919092 40.0 38.0 41.0 34.0 41.0 17 38.349588603439976 40.0 37.0 41.0 34.0 41.0 18 38.310480400309274 40.0 37.0 41.0 34.0 41.0 19 38.22788743489868 40.0 37.0 41.0 34.0 41.0 20 38.18943206850774 40.0 37.0 41.0 34.0 41.0 21 38.09053642026639 40.0 37.0 41.0 34.0 41.0 22 38.081954717201334 40.0 37.0 41.0 34.0 41.0 23 38.0088297080835 40.0 37.0 41.0 34.0 41.0 24 37.96826994616832 40.0 37.0 41.0 33.0 41.0 25 37.84749879644623 40.0 36.0 41.0 33.0 41.0 26 37.70531168395407 40.0 36.0 41.0 33.0 41.0 27 37.677476767765185 40.0 36.0 41.0 33.0 41.0 28 37.57190321968868 40.0 36.0 41.0 33.0 41.0 29 37.565761448349306 40.0 36.0 41.0 33.0 41.0 30 37.43583964287277 40.0 36.0 41.0 33.0 41.0 31 37.329208426335214 40.0 36.0 41.0 32.0 41.0 32 37.22466336965877 39.0 35.0 41.0 32.0 41.0 33 37.09982931419318 39.0 35.0 41.0 31.0 41.0 34 36.99973740645105 39.0 35.0 41.0 31.0 41.0 35 36.85502647818285 39.0 35.0 41.0 31.0 41.0 36 36.72098341284082 39.0 35.0 41.0 31.0 41.0 37 36.63023910601485 39.0 35.0 41.0 30.0 41.0 38 36.453221876960335 39.0 35.0 41.0 30.0 41.0 39 36.47908369439946 39.0 35.0 41.0 30.0 41.0 40 36.336090565597324 39.0 35.0 40.0 30.0 41.0 41 36.19364450668884 39.0 35.0 40.0 30.0 41.0 42 36.15854085517966 39.0 35.0 40.0 30.0 41.0 43 36.001838154842666 39.0 35.0 40.0 29.0 41.0 44 35.78308678716793 38.0 35.0 40.0 28.0 41.0 45 35.71072402876858 38.0 35.0 40.0 28.0 41.0 46 35.56917881161831 38.0 35.0 40.0 27.0 41.0 47 35.397110741535 38.0 34.0 40.0 26.0 41.0 48 35.327935577049324 38.0 34.0 40.0 26.0 41.0 49 35.199282973726056 38.0 34.0 40.0 26.0 41.0 50 35.061253592425636 38.0 34.0 40.0 26.0 41.0 51 33.24464965644011 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 2.0 9 7.0 10 9.0 11 8.0 12 4.0 13 3.0 14 12.0 15 20.0 16 21.0 17 50.0 18 86.0 19 166.0 20 285.0 21 472.0 22 732.0 23 1022.0 24 1421.0 25 1831.0 26 2487.0 27 2907.0 28 3440.0 29 4097.0 30 5106.0 31 6496.0 32 8781.0 33 12562.0 34 19113.0 35 22643.0 36 27204.0 37 43614.0 38 55485.0 39 54093.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.67595956059346 19.792624038980552 23.642537237224097 10.88887916320189 2 33.21443680978015 24.36539892336645 23.767269172976206 18.652895093877195 3 32.63198972967453 24.955140268720733 25.338089194275458 17.07478080732928 4 27.911141260740806 27.21818606211796 25.144791165185932 19.7258815119553 5 22.762484134973086 40.18666024771325 20.313069864472553 16.737785752841116 6 28.745969918450115 35.74992341021489 22.23802646359432 13.266080207740675 7 75.91761856828163 17.75679460807913 3.968809721796723 2.3567771018425314 8 90.19650750579893 2.8535165652763794 4.809473791704962 2.140502137219718 9 84.11309028841525 6.099464600930748 6.25629130377697 3.5311538068770334 10 38.7912673056443 34.354530468145946 13.66288823726786 13.191313988941895 11 27.57341677972778 28.384174362116504 27.28894043502998 16.75346842312574 12 27.349482836593868 26.198812493617517 27.903482282229714 18.5482223875589 13 23.820152596029 29.063635170029322 28.508541584606185 18.607670649335493 14 22.825214816111572 27.310823230775966 27.525639342349045 22.338322610763417 15 21.122003880549112 27.93776532889842 30.670926517571885 20.26930427298058 16 24.086028564342712 26.247319357521114 28.845536639094345 20.821115439041826 17 23.389790946357973 26.2272601280873 28.626343968372066 21.756604957182663 18 24.240666987614336 25.6119888543627 27.912600113790536 22.234744044232425 19 22.48530205552395 29.12563642464295 26.819189753016175 21.569871766816927 20 26.58686740484631 27.032911724801963 27.17697346346303 19.203247406888703 21 25.184544910791136 27.31884692254949 27.295869987016207 20.200738179643167 22 24.645863422177484 25.39717274278962 26.334850540505055 23.622113294527843 23 23.850788510073382 27.237880578289346 27.058806366434705 21.852524545202563 24 22.340146177075585 26.865873050607615 30.778881643252078 20.01509912906473 25 23.1673158562738 26.970181043663473 28.078179934935154 21.784323165127574 26 22.754460443199555 29.827344741564183 26.617138605628256 20.801056209608006 27 22.138824456212525 27.70981953987775 27.43008446759158 22.721271536318145 28 20.783914686273654 29.151531066275695 28.71679285745547 21.347761389995185 29 21.911243380454287 26.203918479291584 27.737173034560232 24.147665105693903 30 23.515981735159816 28.19306461260157 27.51250966490145 20.778443987337155 31 23.701620785738253 28.42502224750901 26.587596831371172 21.28576013538156 32 22.560797700847594 28.32436138707748 26.29983806731148 22.815002844763445 33 22.635928632908808 27.92791807081273 26.33229754766802 23.103855748610442 34 21.786876157964606 27.189738427648187 27.845857586765284 23.177527827621923 35 22.271580083738165 28.374691817293247 26.831225290676468 22.52250280829212 36 23.062643149955505 29.95535909667819 25.708637868907463 21.273359884458838 37 23.783316556523264 28.460399433965016 27.233868732402584 20.522415277109136 38 22.56262126715976 27.003734663807315 29.007104614352198 21.42653945468073 39 24.06560462164646 27.8713875151356 26.7863655593972 21.276642303820736 40 24.475907041883673 27.33635315914628 27.85825783768801 20.32948196128204 41 20.91885859337389 28.057391278976468 28.875807839876288 22.147942287773354 42 22.289086320334953 27.427531474754545 27.632135614979504 22.651246589930995 43 22.434242198783316 27.832363196055258 27.291858141129445 22.441536464031977 44 22.20337870366318 28.27950165579821 26.927509591958803 22.589610048579807 45 22.757013436036587 27.08178330196799 26.04563292339563 24.11557033859979 46 23.083796519176623 28.154405006783666 26.23090726071163 22.53089121332808 47 21.746757699096968 26.845813821173792 29.90174624710053 21.505682232628708 48 23.19831648358061 25.70097889039637 29.055611478255795 22.045093147767226 49 21.697521408668504 28.078179934935154 29.02825798357331 21.196040672823028 50 21.70262739434257 27.72841991626184 28.701110187170848 21.86784250222475 51 21.864924796125287 25.91214786934512 28.180299648416412 24.04262768611318 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 152.0 1 411.5 2 671.0 3 797.0 4 923.0 5 743.0 6 563.0 7 523.0 8 483.0 9 514.0 10 545.0 11 529.5 12 514.0 13 529.0 14 544.0 15 567.0 16 590.0 17 587.0 18 584.0 19 648.5 20 713.0 21 806.5 22 900.0 23 1073.0 24 1246.0 25 1728.5 26 2728.5 27 3246.0 28 3654.0 29 4062.0 30 4906.0 31 5750.0 32 6573.5 33 7397.0 34 8370.0 35 9343.0 36 10066.0 37 10789.0 38 11504.5 39 12220.0 40 12845.5 41 13471.0 42 15187.5 43 16904.0 44 18510.5 45 20117.0 46 20338.0 47 20559.0 48 20929.5 49 21300.0 50 20769.0 51 20238.0 52 19480.5 53 18723.0 54 17519.5 55 16316.0 56 15175.0 57 14034.0 58 12789.0 59 11544.0 60 10741.0 61 9938.0 62 9465.5 63 8993.0 64 7283.5 65 5574.0 66 4643.0 67 3712.0 68 3228.5 69 2745.0 70 2312.0 71 1879.0 72 1782.0 73 1685.0 74 1449.0 75 1072.5 76 932.0 77 635.0 78 338.0 79 263.0 80 188.0 81 174.0 82 160.0 83 122.5 84 85.0 85 68.5 86 52.0 87 40.0 88 28.0 89 18.0 90 8.0 91 5.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 274188.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.36214568106555 #Duplication Level Percentage of deduplicated Percentage of total 1 69.2965291063132 23.118808992370198 2 8.627493850778901 5.756634134243658 3 4.671221645258267 4.67525931112959 4 3.1757310740639517 4.237968109472333 5 2.1710849959005194 3.621602695960436 6 1.6212079803224926 3.245218609129502 7 1.2014211533205794 2.8057391278976467 8 0.9499863350642253 2.5354866004347385 9 0.8264553156600164 2.4815090375946434 >10 7.396556436184749 45.84518651436241 >50 0.05356654823722328 1.141917224677958 >100 0.008745558895873189 0.5346696427268881 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 275 0.10029614716909566 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04996571695333129 0.0 2 0.0 0.0 0.0 0.22940464207040426 0.0 3 3.647132624330751E-4 0.0 0.0 0.32021824441623997 0.0 4 3.647132624330751E-4 0.0 0.0 0.4511503056297139 0.0 5 3.647132624330751E-4 0.0 0.0 0.8027338906151983 0.0 6 3.647132624330751E-4 0.0 0.0 1.0080674573650197 0.0 7 3.647132624330751E-4 0.0 0.0 1.2206952893635024 0.0 8 3.647132624330751E-4 0.0 0.0 1.5770201467606169 0.0 9 3.647132624330751E-4 0.0 0.0 1.69008125811487 0.0 10 3.647132624330751E-4 0.0 0.0 2.050417961398748 0.0 11 3.647132624330751E-4 0.0 0.0 2.602229127459991 0.0 12 3.647132624330751E-4 0.0 0.0 2.9946605978379797 0.0 13 3.647132624330751E-4 0.0 0.0 3.165711117919092 0.0 14 3.647132624330751E-4 0.0 0.0 3.2255240929581164 0.0 15 3.647132624330751E-4 0.0 0.0 3.3779742366551417 0.0 16 3.647132624330751E-4 0.0 0.0 3.728098968590894 0.0 17 3.647132624330751E-4 0.0 0.0 4.184355259894671 0.0 18 3.647132624330751E-4 0.0 0.0 4.616905189140298 0.0 19 3.647132624330751E-4 0.0 0.0 4.8568865158212615 0.0 20 3.647132624330751E-4 0.0 0.0 5.112185799524414 0.0 21 3.647132624330751E-4 0.0 0.0 5.445533721388244 0.0 22 3.647132624330751E-4 0.0 0.0 5.811341123608619 0.0 23 3.647132624330751E-4 0.0 0.0 6.170948400367631 0.0 24 3.647132624330751E-4 0.0 0.0 6.470377988825185 0.0 25 3.647132624330751E-4 0.0 0.0 6.726041985790771 0.0 26 3.647132624330751E-4 0.0 0.0 6.971858724670664 0.0 27 3.647132624330751E-4 0.0 0.0 7.194698528017272 0.0 28 3.647132624330751E-4 0.0 0.0 7.444162399521496 0.0 29 3.647132624330751E-4 0.0 0.0 7.702379389324113 0.0 30 3.647132624330751E-4 0.0 0.0 8.020409354165755 0.0 31 3.647132624330751E-4 0.0 0.0 8.282638189855136 0.0 32 3.647132624330751E-4 0.0 0.0 8.56419682845347 0.0 33 3.647132624330751E-4 0.0 0.0 8.827155090667716 0.0 34 3.647132624330751E-4 0.0 0.0 9.0882897865698 0.0 35 3.647132624330751E-4 0.0 0.0 9.405955038149008 0.0 36 3.647132624330751E-4 0.0 0.0 9.705749339868994 0.0 37 3.647132624330751E-4 0.0 0.0 9.987672691729761 0.0 38 3.647132624330751E-4 0.0 0.0 10.267043050753498 0.0 39 3.647132624330751E-4 0.0 0.0 10.581061169708375 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGTT 30 2.159435E-6 45.000004 8 TCGAGCG 30 2.159435E-6 45.000004 1 CAACGTC 20 7.0238794E-4 45.0 20 ACACCGC 20 7.0238794E-4 45.0 33 ATAGCGT 20 7.0238794E-4 45.0 44 ACGGGTC 20 7.0238794E-4 45.0 5 ACGGGTA 20 7.0238794E-4 45.0 5 CGTTAGC 20 7.0238794E-4 45.0 35 TCTACGG 35 1.2074088E-7 45.0 2 TACGATA 40 6.7830115E-9 45.0 16 GTAGACG 20 7.0238794E-4 45.0 1 TACGAAT 40 6.7830115E-9 45.0 12 CGAATAT 40 6.7830115E-9 45.0 14 GCTAGCT 20 7.0238794E-4 45.0 39 GGTGATC 20 7.0238794E-4 45.0 8 ATTGGCG 25 3.8830112E-5 45.0 12 TTACGAT 40 6.7830115E-9 45.0 15 TAGGCGA 20 7.0238794E-4 45.0 6 GGTTAAC 35 1.2074088E-7 45.0 9 CCCTACA 230 0.0 42.065216 27 >>END_MODULE