##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551122_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 337682 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7615211944966 31.0 31.0 34.0 30.0 34.0 2 31.89428811722271 31.0 31.0 34.0 30.0 34.0 3 31.848718616923616 33.0 31.0 34.0 30.0 34.0 4 35.6003281193549 37.0 35.0 37.0 33.0 37.0 5 31.012793101201723 37.0 35.0 37.0 0.0 37.0 6 33.28459319714998 37.0 35.0 37.0 17.0 37.0 7 29.778806687949018 35.0 32.0 37.0 0.0 37.0 8 32.761521194496595 35.0 35.0 37.0 17.0 37.0 9 36.52741928796915 39.0 35.0 39.0 32.0 39.0 10 36.651370224056954 38.0 35.0 39.0 32.0 39.0 11 36.753534390343575 39.0 35.0 39.0 33.0 39.0 12 36.83386440497273 39.0 35.0 39.0 33.0 39.0 13 36.694431447338026 39.0 35.0 39.0 33.0 39.0 14 37.839452502650424 40.0 37.0 41.0 33.0 41.0 15 37.91970256039706 40.0 37.0 41.0 33.0 41.0 16 37.96984440982936 40.0 37.0 41.0 33.0 41.0 17 37.91414407637955 40.0 37.0 41.0 33.0 41.0 18 37.86422432939867 40.0 36.0 41.0 33.0 41.0 19 37.77674853856587 40.0 36.0 41.0 33.0 41.0 20 37.72291978844001 39.0 36.0 41.0 33.0 41.0 21 37.6380559224359 39.0 36.0 41.0 33.0 41.0 22 37.603206567125284 39.0 36.0 41.0 33.0 41.0 23 37.530534645021056 39.0 36.0 41.0 33.0 41.0 24 37.49843047600997 39.0 36.0 41.0 32.0 41.0 25 37.40207058712043 39.0 36.0 41.0 32.0 41.0 26 37.21907297398144 39.0 35.0 41.0 32.0 41.0 27 37.18488104192702 39.0 35.0 41.0 32.0 41.0 28 37.077493025983024 39.0 35.0 41.0 31.0 41.0 29 37.03492931219313 39.0 35.0 41.0 31.0 41.0 30 36.88472586634763 39.0 35.0 40.0 31.0 41.0 31 36.79054850421402 39.0 35.0 40.0 31.0 41.0 32 36.65869072085572 39.0 35.0 40.0 30.0 41.0 33 36.482329528965124 39.0 35.0 40.0 30.0 41.0 34 36.382318275774246 39.0 35.0 40.0 30.0 41.0 35 36.28963344211418 39.0 35.0 40.0 30.0 41.0 36 36.13033267985857 39.0 35.0 40.0 29.0 41.0 37 36.06818545258557 38.0 35.0 40.0 29.0 41.0 38 35.856666923318386 38.0 35.0 40.0 28.0 41.0 39 35.83700345295278 38.0 35.0 40.0 28.0 41.0 40 35.70970025053157 38.0 35.0 40.0 27.0 41.0 41 35.61918313679734 38.0 35.0 40.0 27.0 41.0 42 35.57066707730942 38.0 35.0 40.0 27.0 41.0 43 35.35213603330944 38.0 34.0 40.0 26.0 41.0 44 35.1513465331288 38.0 34.0 40.0 25.0 41.0 45 34.99267950320124 38.0 34.0 40.0 24.0 41.0 46 34.82105057420887 38.0 34.0 40.0 24.0 41.0 47 34.643004365053514 38.0 33.0 40.0 23.0 41.0 48 34.541731569938584 38.0 33.0 40.0 23.0 41.0 49 34.35048062970487 37.0 33.0 40.0 23.0 41.0 50 34.158104370383974 37.0 33.0 40.0 22.0 41.0 51 31.98165137614679 35.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 0.0 10 9.0 11 2.0 12 4.0 13 6.0 14 11.0 15 13.0 16 36.0 17 70.0 18 140.0 19 278.0 20 423.0 21 769.0 22 1166.0 23 1752.0 24 2510.0 25 3160.0 26 3845.0 27 4555.0 28 5479.0 29 6574.0 30 8000.0 31 10277.0 32 13219.0 33 18165.0 34 25184.0 35 30034.0 36 34974.0 37 51080.0 38 61108.0 39 54829.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.35035921369809 19.585586439312728 24.443707393346404 10.620346953642775 2 32.607601234297356 23.54789417262395 24.52721791507987 19.317286677998826 3 32.95467333171445 23.77325412666355 25.937420413288244 17.334652128333758 4 27.98698183498084 27.4483093561398 24.891169798804793 19.673539010074567 5 21.990215646673498 40.07735088041412 20.52789310653218 17.404540366380203 6 27.116932498622965 36.26015008202984 23.306838978684087 13.316078440663109 7 73.59705284853797 17.286677998827297 6.001800510539502 3.114468642095226 8 85.29859453568743 3.6107935868657495 7.0462743054115995 4.044337572035229 9 79.21713327923905 6.402769469500891 9.157432140297676 5.222665110962385 10 35.98326235926108 32.806605030768594 17.03022370158907 14.17990890838126 11 25.58264876422196 27.804857824817432 28.811129998045498 17.80136341291511 12 25.729532518760255 24.373226882096173 30.82722798372433 19.07001261541924 13 23.655984032314425 27.79952736598338 30.965523776807768 17.578964824894427 14 20.532927428764342 27.785608945694467 29.85826902233462 21.823194603206566 15 19.687457430363477 28.027552549440003 32.52616366877714 19.758826351419383 16 22.35179843758329 27.063924046884345 30.60275643949041 19.981521076041954 17 21.46220408550056 26.74794629266588 28.365148275596567 23.424701346236994 18 22.13858008422125 26.044621863173045 30.388649676322693 21.428148376283012 19 20.84772063657524 28.819125686296577 28.53068863605404 21.802465041074147 20 22.3227770505979 28.7288040227196 29.682363880810943 19.26605504587156 21 23.2671566740306 28.1922045000918 29.809110346420596 18.731528479457005 22 22.537772223571288 24.747543546887307 29.037674498492667 23.677009731048738 23 20.35406092122174 28.07996872797484 29.60418381791153 21.961786532891892 24 21.00941122120812 25.663197919936508 31.781972388223238 21.545418470632132 25 20.054962953311104 27.0405292553349 29.119408200614778 23.785099590739218 26 18.74426235333835 28.534834548480525 30.590022565609065 22.130880532572064 27 20.342511593747965 27.880076521697926 28.80639181241523 22.971020072138877 28 17.23159659087544 28.901747798224363 29.695690027896067 24.17096558300413 29 18.725901884021063 26.466024247664965 30.27374867478871 24.53432519352527 30 20.736373274263954 26.052617551424124 30.614898040167972 22.59611113414396 31 20.1731214574659 28.10247510971861 26.663843497728635 25.060559935086857 32 19.929104897507123 27.086134292026227 29.089794540425608 23.894966270041046 33 19.37947536439609 26.739062194609133 29.34239906183925 24.539063379155536 34 17.351531914641587 26.66354736112674 30.865725741970255 25.119194982261416 35 17.846672313004543 26.517255879792227 30.951901493120747 24.68417031408248 36 19.31935963421207 26.82731090197286 29.84257378243436 24.010755681380708 37 19.22133841898591 26.98130193495656 29.020794712184838 24.776564933872695 38 18.909506577193927 28.067827127297278 29.137472533330172 23.885193762178616 39 20.575274962834854 26.44944059795903 30.20563725635361 22.769647182852506 40 20.874965203949277 25.3451472095048 29.837835596804098 23.942051989741827 41 18.080916365100894 24.557423848472823 29.501424417055098 27.860235369371182 42 18.831030377692624 24.31251887870837 29.98916140037076 26.867289343228247 43 19.459728383508747 25.146439549635456 29.78068123263899 25.613150834216807 44 18.29857676749131 26.56197250667788 28.62071416302912 26.51873656280169 45 19.749053843556954 24.474505599943143 29.1724166523534 26.604023904146505 46 20.511309456826247 24.746655137081632 28.975485812095403 25.766549593996718 47 17.554385486937417 24.58259545963362 32.399121066565584 25.463897986863383 48 19.146415858707304 23.740086827251673 31.382187975669417 25.731309338371606 49 20.412695968396303 23.55144781184665 31.294531541509468 24.74132467824758 50 18.94119319359634 24.091897110299037 30.936206253220483 26.030703442884136 51 18.642687498889487 24.097523705734982 28.842816614447912 28.41697218092762 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 232.0 1 631.5 2 1031.0 3 1064.0 4 1097.0 5 859.5 6 622.0 7 572.5 8 523.0 9 652.5 10 782.0 11 748.0 12 714.0 13 752.0 14 790.0 15 837.0 16 884.0 17 809.0 18 734.0 19 761.5 20 789.0 21 837.5 22 886.0 23 1371.0 24 1856.0 25 1998.5 26 2565.0 27 2989.0 28 4291.5 29 5594.0 30 6370.0 31 7146.0 32 7746.5 33 8347.0 34 9756.5 35 11166.0 36 11948.0 37 12730.0 38 13656.0 39 14582.0 40 16174.5 41 17767.0 42 19784.0 43 21801.0 44 24172.5 45 26544.0 46 29279.0 47 32014.0 48 33602.5 49 35191.0 50 34017.0 51 32843.0 52 29068.5 53 25294.0 54 21615.5 55 17937.0 56 15617.0 57 13297.0 58 11916.0 59 10535.0 60 9627.5 61 8720.0 62 7609.5 63 6499.0 64 5557.5 65 4616.0 66 3565.0 67 2514.0 68 2159.0 69 1804.0 70 1477.0 71 1150.0 72 1140.5 73 1131.0 74 1037.5 75 817.0 76 690.0 77 509.0 78 328.0 79 242.0 80 156.0 81 151.5 82 147.0 83 111.5 84 76.0 85 49.5 86 23.0 87 19.0 88 15.0 89 10.0 90 5.0 91 3.5 92 2.0 93 3.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 337682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.36095520359862 #Duplication Level Percentage of deduplicated Percentage of total 1 73.89617145568266 29.086238943845682 2 10.115896122972522 7.963426682811568 3 4.109282785488689 4.852358869156178 4 2.4658300828331647 3.8822970972032835 5 1.600416616711981 3.149696337874758 6 1.1571458640667203 2.7327819911735762 7 0.8445246295570068 2.326890727863035 8 0.6637650679102438 2.0901141682982964 9 0.5041513691240657 1.785949151033274 >10 4.4929996276962605 37.15737698591728 >50 0.12659483937341254 3.169002519492374 >100 0.022472456693505186 1.6523157907736568 >500 7.490818897835062E-4 0.15155073455704132 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC 514 0.1522142133723444 No Hit GGAAAGAGACATAAATTGGAAATTCAAAATAGTCTGATTCAAGCTTTGGAG 392 0.11608554794155447 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 363 0.10749758648669458 No Hit CTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGCT 361 0.10690531328291114 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21203380695447197 0.0 2 0.0 0.0 0.0 0.8499120474292382 0.0 3 0.0 0.0 0.0 1.135387731652857 0.0 4 0.0 0.0 0.0 1.5156271284818261 0.0 5 0.0 0.0 0.0 2.515976569672058 0.0 6 0.0 0.0 0.0 3.122760466948194 0.0 7 0.0 0.0 0.0 3.720364129565686 0.0 8 0.0 0.0 0.0 4.912610088781753 0.0 9 0.0 0.0 0.0 5.299956764056124 0.0 10 0.0 0.0 0.0 6.281649599327178 0.0 11 0.0 0.0 0.0 7.858280867798698 0.0 12 0.0 0.0 0.0 8.901866252865121 0.0 13 0.0 0.0 0.0 9.328599096191091 0.0 14 0.0 0.0 0.0 9.48851286121262 0.0 15 0.0 0.0 0.0 9.876155673088883 0.0 16 0.0 0.0 0.0 10.739393867603248 0.0 17 0.0 0.0 0.0 11.818219508294787 0.0 18 0.0 0.0 0.0 12.884607411706872 0.0 19 0.0 0.0 0.0 13.48487630374139 0.0 20 0.0 0.0 0.0 14.108539987325354 0.0 21 0.0 0.0 0.0 15.000207295621324 0.0 22 0.0 0.0 0.0 15.862260943728122 0.0 23 0.0 0.0 0.0 16.7500784761995 0.0 24 2.961366018917206E-4 0.0 0.0 17.43474629977316 0.0 25 2.961366018917206E-4 0.0 0.0 18.074401359859277 0.0 26 2.961366018917206E-4 0.0 0.0 18.65512523616894 0.0 27 2.961366018917206E-4 0.0 0.0 19.242660254322114 0.0 28 2.961366018917206E-4 0.0 0.0 19.827826179660153 0.0 29 2.961366018917206E-4 0.0 0.0 20.440236672372233 0.0 30 2.961366018917206E-4 0.0 0.0 21.175543854869375 0.0 31 2.961366018917206E-4 0.0 0.0 21.82171392019711 0.0 32 8.884098056751618E-4 0.0 0.0 22.452484882226475 0.0 33 8.884098056751618E-4 0.0 0.0 23.061934008919636 0.0 34 8.884098056751618E-4 0.0 0.0 23.63791969959903 0.0 35 8.884098056751618E-4 0.0 0.0 24.25743747075651 0.0 36 8.884098056751618E-4 0.0 0.0 24.855337269975895 0.0 37 8.884098056751618E-4 0.0 0.0 25.43931864890637 0.0 38 8.884098056751618E-4 0.0 0.0 26.046102546182503 0.0 39 8.884098056751618E-4 0.0 0.0 26.684276923259162 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCG 75 0.0 45.000004 5 GACGTGC 35 1.2085184E-7 45.000004 43 GCTAACG 35 1.2085184E-7 45.000004 1 CGGGTCC 25 3.8849343E-5 45.0 6 ACAGTCG 20 7.026202E-4 45.0 26 CGTGCAG 20 7.026202E-4 45.0 16 CGGCATG 25 3.8849343E-5 45.0 33 TTCACGG 45 3.8380676E-10 45.0 2 TGACGTA 20 7.026202E-4 45.0 20 CGACAAG 20 7.026202E-4 45.0 41 CTGACGT 20 7.026202E-4 45.0 19 ACGGGTC 45 3.8380676E-10 45.0 5 ACGGGCC 25 3.8849343E-5 45.0 5 ATCGTCT 20 7.026202E-4 45.0 37 CCGTAAC 20 7.026202E-4 45.0 19 GCTTACA 25 3.8849343E-5 45.0 32 ACGTGCA 20 7.026202E-4 45.0 15 TCGTCTC 20 7.026202E-4 45.0 38 TTGCGTA 25 3.8849343E-5 45.0 20 GCGATTC 25 3.8849343E-5 45.0 9 >>END_MODULE