##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551115_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 267966 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.877294134330473 31.0 31.0 34.0 30.0 34.0 2 32.02089444183217 33.0 31.0 34.0 30.0 34.0 3 31.961551092302756 33.0 31.0 34.0 30.0 34.0 4 35.68928147600815 37.0 35.0 37.0 35.0 37.0 5 31.265977773299596 37.0 35.0 37.0 0.0 37.0 6 33.448922624512065 37.0 35.0 37.0 17.0 37.0 7 29.54275915601233 35.0 32.0 37.0 0.0 37.0 8 32.65110125911496 35.0 35.0 37.0 17.0 37.0 9 36.54614018196338 39.0 35.0 39.0 32.0 39.0 10 36.85696319682348 38.0 37.0 39.0 33.0 39.0 11 36.91410850630304 39.0 37.0 39.0 33.0 39.0 12 36.84340923848548 39.0 35.0 39.0 33.0 39.0 13 36.51755073404835 39.0 35.0 39.0 32.0 39.0 14 37.71828142376272 40.0 36.0 41.0 33.0 41.0 15 37.87505131247994 40.0 36.0 41.0 33.0 41.0 16 37.95976355209243 40.0 36.0 41.0 33.0 41.0 17 37.93851458767157 40.0 36.0 41.0 33.0 41.0 18 37.849118918071696 40.0 36.0 41.0 33.0 41.0 19 37.76517170088743 39.0 36.0 41.0 33.0 41.0 20 37.684403991551164 39.0 36.0 41.0 33.0 41.0 21 37.55789167282416 39.0 35.0 41.0 33.0 41.0 22 37.50558652963436 39.0 35.0 41.0 33.0 41.0 23 37.463868550487746 39.0 35.0 41.0 33.0 41.0 24 37.42620705611906 39.0 35.0 41.0 33.0 41.0 25 37.2865848652441 39.0 35.0 41.0 32.0 41.0 26 37.097807184493554 39.0 35.0 41.0 32.0 41.0 27 37.04956598971511 39.0 35.0 41.0 32.0 41.0 28 36.866583820335414 39.0 35.0 40.0 31.0 41.0 29 36.918642663621505 39.0 35.0 40.0 31.0 41.0 30 36.8337811513401 39.0 35.0 40.0 31.0 41.0 31 36.68816193099124 39.0 35.0 40.0 31.0 41.0 32 36.59315734085668 39.0 35.0 40.0 31.0 41.0 33 36.45464349954845 39.0 35.0 40.0 30.0 41.0 34 36.34458476075323 39.0 35.0 40.0 30.0 41.0 35 36.266776382078326 38.0 35.0 40.0 30.0 41.0 36 36.139812513527836 38.0 35.0 40.0 30.0 41.0 37 35.97561630953181 38.0 35.0 40.0 29.0 41.0 38 35.90249136084429 38.0 35.0 40.0 29.0 41.0 39 35.861586917743296 38.0 35.0 40.0 29.0 41.0 40 35.69406939686378 38.0 35.0 40.0 28.0 41.0 41 35.63827127322123 38.0 35.0 40.0 28.0 41.0 42 35.52164080517677 38.0 34.0 40.0 28.0 41.0 43 35.360609181761866 38.0 34.0 40.0 27.0 41.0 44 35.167644402648094 38.0 34.0 40.0 26.0 41.0 45 35.01561018935238 38.0 34.0 40.0 26.0 41.0 46 34.84356970660457 37.0 34.0 40.0 25.0 41.0 47 34.665200062694524 37.0 33.0 40.0 24.0 41.0 48 34.598993902211475 37.0 34.0 40.0 24.0 41.0 49 34.417892568460175 37.0 33.0 40.0 24.0 41.0 50 34.24643798093788 37.0 33.0 40.0 23.0 41.0 51 32.02806326175709 35.0 30.0 39.0 16.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 7.0 10 8.0 11 5.0 12 7.0 13 7.0 14 7.0 15 9.0 16 29.0 17 48.0 18 105.0 19 191.0 20 356.0 21 593.0 22 899.0 23 1307.0 24 1800.0 25 2376.0 26 2957.0 27 3439.0 28 4072.0 29 5023.0 30 6243.0 31 7983.0 32 10208.0 33 15031.0 34 22042.0 35 26852.0 36 26936.0 37 40009.0 38 47281.0 39 42132.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.69658837315182 19.32558608181635 25.02705567124187 11.950769873789959 2 32.24364285021234 23.1555495846488 27.096348044154855 17.504459520984007 3 31.892852078248733 23.66904756573595 27.570661949650326 16.867438406364986 4 28.802161468245973 26.04808072665935 26.170857496846615 18.97890030824806 5 21.62102654814417 39.75056537023354 22.258047662763186 16.370360418859107 6 27.173596650321308 35.481367039101976 23.814215236261315 13.5308210743154 7 71.35382847077615 19.282297007829353 5.698110954374809 3.6657635670196966 8 86.10084861512281 4.190456998275901 6.47992655784689 3.228767828754394 9 80.30906906100027 6.242583014263003 8.318965838949717 5.129382085787003 10 44.21083271758358 28.324488927699782 14.625736100848616 12.838942253868026 11 31.776419396490603 24.899054357642385 25.0557906600091 18.268735585857907 12 29.453363486412453 22.01659912078398 28.80253464991827 19.727502742885292 13 23.637327123590307 26.04808072665935 31.538702671234407 18.775889478515932 14 19.881253591873595 29.656747497816887 30.089638237686874 20.372360672622648 15 19.59651597590739 23.99558152899995 36.76809744519827 19.63980504989439 16 23.261159997910184 24.397498190068887 32.51121410925267 19.83012770276826 17 22.741691110066203 23.250337729413435 28.141256726599646 25.866714433920723 18 25.313286013897283 24.071337408477195 30.092996872737587 20.522379704887932 19 26.161901136711375 26.252584283080687 26.248852466357675 21.336662113850263 20 25.89656896770486 26.386556503437003 28.22372987617832 19.493144652679817 21 24.459446347670973 25.796556279527998 29.69705111842547 20.046946254375555 22 23.161520491405625 23.863475217005142 28.70550741511983 24.269496876469404 23 22.434935775434198 26.613450960196445 27.249725711470855 23.7018875528985 24 23.83697931827172 23.62874394512737 31.24836733018368 21.285909406417233 25 22.539053462006372 25.696916773023442 29.96648828582731 21.797541479142875 26 22.303202645111693 27.981908152526813 27.841218662069068 21.873670540292427 27 23.17943321167611 26.007030742706167 29.137651791645208 21.67588425397252 28 19.433435585111543 26.556354164334284 33.15644522066232 20.853765029891854 29 22.195726323488802 23.571273967592905 32.17423105916422 22.058768649754075 30 23.658598478911504 25.278953300045526 29.164894053723234 21.897554167319736 31 24.505720875036385 27.43109200420949 26.561578707746502 21.50160841300762 32 24.045961054760678 28.00317950784801 27.524387422284917 20.426472015106395 33 23.874670667174193 26.482837374890845 26.665696394318683 22.976795563616278 34 21.594157467738444 25.132666084503256 29.970593284222623 23.302583163535672 35 22.231551764029764 23.861982490315935 31.24165006008225 22.66481568557205 36 24.710597613130027 24.828896203249666 29.3977594172395 21.062746766380812 37 22.2610331161416 26.648903219065108 30.347133591575048 20.742930073218243 38 22.207294955330152 27.55125650269064 27.64082010404305 22.60062843793616 39 23.3309449706306 25.696916773023442 28.440548427785618 22.53158982856034 40 24.652008090578654 23.81906659800124 29.008530933028815 22.52039437839129 41 21.75499876850048 25.238649679436943 28.036392676682865 24.969958875379714 42 23.691811647746356 25.584215907988327 28.24985259323944 22.474119851025876 43 23.277206809819155 23.9198256495227 29.674660218087368 23.128307322570773 44 21.541538851943905 24.830388929938874 29.680631124844197 23.947441093273028 45 23.878775665569513 25.35172372614436 27.801288223132786 22.968212385153343 46 24.933387071494145 25.495025488308222 27.14822029660479 22.42336714359284 47 21.79791466081518 26.136151601322556 29.78848062813939 22.277453109722874 48 22.825283804661787 24.038497421314645 29.651896136076967 23.484322637946605 49 22.0647395565109 22.806997902719 31.430479986266914 23.69778255450318 50 20.438040646947748 25.007650224282184 31.06662785577275 23.48768127299732 51 21.88785144383989 24.947941156713913 27.044102610032617 26.120104789413585 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 186.0 1 441.0 2 696.0 3 842.5 4 989.0 5 792.5 6 596.0 7 534.0 8 472.0 9 510.0 10 548.0 11 609.0 12 670.0 13 637.5 14 605.0 15 666.0 16 727.0 17 792.5 18 858.0 19 808.0 20 758.0 21 820.5 22 883.0 23 974.0 24 1065.0 25 1274.0 26 1775.0 27 2067.0 28 2581.5 29 3096.0 30 3895.5 31 4695.0 32 5271.5 33 5848.0 34 6506.5 35 7165.0 36 7989.5 37 8814.0 38 9274.0 39 9734.0 40 11262.5 41 12791.0 42 14925.0 43 17059.0 44 18491.5 45 19924.0 46 21923.0 47 23922.0 48 25314.0 49 26706.0 50 25519.5 51 24333.0 52 21544.5 53 18756.0 54 16418.0 55 14080.0 56 13023.0 57 11966.0 58 11146.0 59 10326.0 60 9912.5 61 9499.0 62 8852.0 63 8205.0 64 7164.0 65 6123.0 66 5104.0 67 4085.0 68 3422.0 69 2759.0 70 2366.0 71 1973.0 72 1652.5 73 1332.0 74 1077.5 75 698.5 76 574.0 77 426.0 78 278.0 79 257.5 80 237.0 81 187.5 82 138.0 83 101.0 84 64.0 85 52.0 86 40.0 87 25.0 88 10.0 89 7.5 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 267966.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.90564228234673 #Duplication Level Percentage of deduplicated Percentage of total 1 71.9074448231717 27.25697880904732 2 9.764718155248291 7.402758267615568 3 4.341388932843518 4.936894076907163 4 2.6701538314913598 4.048555839013961 5 1.8973796211681617 3.5960696596907455 6 1.3645530523044596 3.103455592556233 7 0.9456902161547447 2.5092896530433837 8 0.762750141195381 2.313002720236926 9 0.5998035185689564 2.0462343853111 >10 5.683138338404106 40.41350804192576 >50 0.04898395401614622 1.21372013631645 >100 0.012995742902242874 0.8821543794394929 >500 9.996725309417596E-4 0.277378438895923 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 732 0.27316898412485163 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 348 0.12986722196099504 No Hit GCTGTCTCTTATACACATCTGACGCTGTTCGGATCGTATGCCGTCTTCTGC 295 0.11008859332900442 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16681220751886433 0.0 2 0.0 0.0 0.0 0.6418724763589411 0.0 3 0.0 0.0 0.0 0.8590642096385362 0.0 4 0.0 0.0 0.0 1.1105886567698888 0.0 5 0.0 0.0 0.0 1.9028533470664188 0.0 6 0.0 0.0 0.0 2.3260413634565578 0.0 7 0.0 0.0 0.0 2.8022211773135397 0.0 8 0.0 0.0 0.0 3.6579267519013605 0.0 9 0.0 0.0 0.0 3.9568452714150304 0.0 10 0.0 0.0 0.0 4.808819029279834 0.0 11 0.0 0.0 0.0 5.935081316286395 0.0 12 0.0 0.0 0.0 6.8176559712799385 0.0 13 0.0 0.0 0.0 7.1803885567572 0.0 14 0.0 0.0 0.0 7.3005530552383515 0.0 15 0.0 0.0 0.0 7.584917489532254 0.0 16 0.0 0.0 0.0 8.168200443339826 0.0 17 0.0 0.0 0.0 8.92837150981841 0.0 18 0.0 0.0 0.0 9.662419859235873 0.0 19 0.0 0.0 0.0 10.079636968869185 0.0 20 0.0 0.0 0.0 10.511408163722264 0.0 21 0.0 0.0 0.0 11.08909339244531 0.0 22 0.0 0.0 0.0 11.708574968466149 0.0 23 0.0 0.0 0.0 12.29820201070285 0.0 24 0.0 0.0 0.0 12.77587455124904 0.0 25 0.0 0.0 0.0 13.211377562825135 0.0 26 0.0 0.0 0.0 13.614413768910982 0.0 27 0.0 0.0 0.0 14.007747251516983 0.0 28 0.0 0.0 0.0 14.409663912585925 0.0 29 0.0 0.0 0.0 14.80560966689804 0.0 30 0.0 0.0 0.0 15.299702201025504 0.0 31 0.0 0.0 0.0 15.742668846047632 0.0 32 0.0 0.0 0.0 16.171454587522298 0.0 33 0.0 0.0 0.0 16.618526230939747 0.0 34 0.0 0.0 0.0 17.028279707127023 0.0 35 0.0 0.0 0.0 17.49662270586567 0.0 36 0.0 0.0 0.0 17.940708895904706 0.0 37 0.0 0.0 0.0 18.3538210071427 0.0 38 0.0 0.0 0.0 18.774023570154423 0.0 39 0.0 0.0 0.0 19.206914310024406 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATGG 25 3.8827733E-5 45.000004 2 TGGAACG 25 3.8827733E-5 45.000004 1 CACGACC 50 2.1827873E-11 45.000004 27 AGACACG 50 2.1827873E-11 45.000004 24 TTAACGG 25 3.8827733E-5 45.000004 2 ACGACCA 50 2.1827873E-11 45.000004 28 TCCGCGT 20 7.023594E-4 45.0 16 GTATTAG 20 7.023594E-4 45.0 1 AATCTCG 20 7.023594E-4 45.0 18 AGCGAAG 20 7.023594E-4 45.0 1 CTCGCGA 20 7.023594E-4 45.0 26 TGAGCGC 35 1.2072633E-7 45.0 21 CTCTAAT 20 7.023594E-4 45.0 44 TTAGGTT 30 2.1592514E-6 44.999996 12 AGTACGG 30 2.1592514E-6 44.999996 2 TACTCCT 150 0.0 42.0 22 GGCGATA 70 0.0 41.785713 8 ACTATGC 175 0.0 41.14286 8 CCTCGTG 175 0.0 41.14286 15 CCCTCGT 170 0.0 41.02941 14 >>END_MODULE