##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551107_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 241624 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.720702413667517 31.0 31.0 34.0 30.0 34.0 2 31.84886848988511 31.0 31.0 34.0 30.0 34.0 3 31.53130483726782 31.0 31.0 34.0 30.0 34.0 4 35.469158692845085 37.0 35.0 37.0 33.0 37.0 5 31.80769708307122 37.0 35.0 37.0 0.0 37.0 6 33.71885657053935 37.0 35.0 37.0 19.0 37.0 7 20.866255007780683 32.0 0.0 37.0 0.0 37.0 8 27.91150713505281 35.0 17.0 37.0 17.0 37.0 9 34.37495447472105 35.0 32.0 39.0 28.0 39.0 10 36.052490646624506 37.0 35.0 39.0 32.0 39.0 11 36.49755405092209 37.0 35.0 39.0 32.0 39.0 12 36.83648147535013 39.0 35.0 39.0 33.0 39.0 13 36.55639340462868 39.0 35.0 39.0 32.0 39.0 14 38.065068039598714 40.0 37.0 41.0 33.0 41.0 15 38.07485597457206 40.0 37.0 41.0 33.0 41.0 16 38.21731284971692 40.0 37.0 41.0 34.0 41.0 17 38.045036916862564 40.0 37.0 41.0 33.0 41.0 18 37.871287620435055 40.0 37.0 41.0 33.0 41.0 19 37.769596563255305 40.0 37.0 41.0 33.0 41.0 20 37.77271297553223 39.0 36.0 41.0 33.0 41.0 21 37.78569181869351 39.0 36.0 41.0 33.0 41.0 22 37.73714945535212 39.0 36.0 41.0 33.0 41.0 23 37.74895705724597 39.0 36.0 41.0 33.0 41.0 24 37.53586978114757 39.0 35.0 41.0 33.0 41.0 25 37.47979505347151 39.0 35.0 41.0 33.0 41.0 26 37.24660629738768 39.0 35.0 40.0 33.0 41.0 27 37.303276992351755 39.0 35.0 40.0 33.0 41.0 28 37.20314621064133 39.0 35.0 40.0 33.0 41.0 29 37.1447993576797 39.0 35.0 40.0 32.0 41.0 30 37.04866238453134 39.0 35.0 40.0 32.0 41.0 31 36.904641095255435 39.0 35.0 40.0 32.0 41.0 32 36.68454706486111 39.0 35.0 40.0 31.0 41.0 33 36.502334205211405 39.0 35.0 40.0 30.0 41.0 34 36.170616329503694 39.0 35.0 40.0 30.0 41.0 35 35.617020660199316 39.0 35.0 40.0 25.0 41.0 36 35.56199715260073 38.0 35.0 40.0 25.0 41.0 37 35.502644604840576 38.0 35.0 40.0 25.0 41.0 38 35.07735986491408 38.0 34.0 40.0 24.0 41.0 39 34.99154885276297 38.0 34.0 40.0 23.0 41.0 40 34.40565506737741 38.0 33.0 40.0 21.0 41.0 41 34.32029516935404 38.0 33.0 40.0 21.0 41.0 42 34.207884978313416 38.0 33.0 40.0 20.0 41.0 43 33.94140896599676 38.0 33.0 40.0 18.0 41.0 44 33.821189120286064 38.0 33.0 40.0 17.0 41.0 45 33.757979339800684 37.0 33.0 40.0 18.0 41.0 46 33.303955732874215 37.0 32.0 40.0 15.0 41.0 47 33.25797520113896 37.0 32.0 40.0 15.0 41.0 48 32.917913783399 37.0 31.0 40.0 13.0 41.0 49 32.78311757110221 37.0 31.0 40.0 13.0 41.0 50 32.7521479654339 37.0 31.0 40.0 13.0 41.0 51 30.35313545012085 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 6.0 10 9.0 11 5.0 12 7.0 13 2.0 14 5.0 15 12.0 16 22.0 17 53.0 18 120.0 19 197.0 20 335.0 21 529.0 22 938.0 23 1587.0 24 2520.0 25 3682.0 26 4775.0 27 5467.0 28 5833.0 29 6302.0 30 7170.0 31 8476.0 32 10166.0 33 13655.0 34 17671.0 35 22061.0 36 25667.0 37 39796.0 38 39772.0 39 24779.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.325282256729466 17.16013309936099 20.287305896765222 16.227278747144325 2 31.33173856901632 32.30597953845645 21.240853557593617 15.121428334933615 3 26.597109558653116 32.123050690328775 28.32913948945469 12.950700261563423 4 25.257010892957656 21.50407244313479 37.544283680429096 15.694632983478463 5 24.898602787802538 33.36754627023806 24.288977916101047 17.44487302585836 6 22.03589047445618 37.62622918253153 28.980150978379633 11.357729364632654 7 41.10229116312949 42.506539085521304 13.253236433466874 3.1379333178823297 8 67.37079098102838 11.979770221501175 15.945435883852596 4.7040029136178525 9 61.916034830977054 8.509502367314505 15.582061384630666 13.992401417077774 10 36.470714829652685 24.28732245141211 24.453282786478166 14.788679932457041 11 28.21615402443466 23.18271363771811 29.881137635334238 18.719994702512995 12 27.07181405820614 20.559629838095553 33.91302188524319 18.45553421845512 13 20.130036751316094 23.825447803198358 38.7627056914876 17.281809753997948 14 17.639390126808596 28.32996722179916 32.04276065291528 21.987881998476972 15 16.10146343078502 24.59523888355461 42.47715458729265 16.826143098367712 16 18.301576002383868 25.167201933582756 32.880425785518 23.65079627851538 17 18.24156540740986 23.49973512564977 35.020941628315065 23.237757838625303 18 18.640946263616197 26.942273946296723 34.27474091977618 20.1420388703109 19 20.28896136145416 27.046154355527598 30.016471873654936 22.64841240936331 20 21.54173426480813 25.93947621097242 35.29367943581763 17.225110088401816 21 20.540591994172765 29.198672317319474 31.85652087540973 18.404214813098037 22 18.943482435519652 23.94960765486872 31.391749163990333 25.715160745621297 23 19.289888421679965 28.49013343045393 33.11591563751945 19.104062510346655 24 21.469307684667086 23.40702910306923 31.764228719001427 23.35943449326226 25 18.718753103996292 30.966708605105453 30.185743138098864 20.12879515279939 26 18.081813064927324 25.10512200774758 32.98430619474886 23.828758732576233 27 20.95901069430189 26.67946892692779 30.535460053637053 21.826060325133266 28 16.158163096381152 24.819968215077974 36.15617653875443 22.865692149786447 29 21.227195973909875 22.889282521603814 33.82942091845181 22.0541005860345 30 18.48657418137271 26.568138926596696 35.211320067542964 19.733966824487634 31 22.564397576399696 23.264245273648314 29.54052577558521 24.630831374366785 32 22.805267688640203 25.601347548256797 30.603334105883523 20.99005065721948 33 22.342979174254214 23.400821110485715 29.617091017448598 24.639108697811476 34 22.998543191073733 23.09456014303215 32.823726119921865 21.083170545972255 35 20.022431546535113 22.438582260040395 35.75969274575373 21.77929344767076 36 21.863308280634374 24.441694533655596 33.34064496904281 20.35435221666722 37 18.802767936959906 24.7268483263252 34.78338244545244 21.687001291262455 38 21.627818428632917 25.711435950071188 28.91889878488892 23.741846836406978 39 25.25949408999106 23.478214084693576 30.1406317253253 21.121660099990066 40 22.469622222957987 23.328808396516905 35.13723802271297 19.064331357812137 41 20.048091249213655 25.688673310598286 33.01369069297752 21.249544747210543 42 18.52547760156276 23.77371453166904 37.046816541403174 20.653991325365027 43 22.293315233586068 22.900870774426384 31.806443068569344 22.9993709234182 44 21.266927126444394 24.061765387544284 31.026305333907228 23.645002152104095 45 18.94803496341423 24.34940237724729 30.99899016653975 25.703572492798727 46 23.488146872827205 27.063536734761446 28.63415885839155 20.8141575340198 47 18.94803496341423 22.767192000794623 37.69162003774459 20.593152998046552 48 20.906449690428104 24.929228884547893 31.093351653809226 23.07096977121478 49 18.497748568023045 23.480697281726982 35.606562262026955 22.414991888223025 50 19.298993477469125 23.201337615468663 33.62993742343476 23.869731483627454 51 20.164387643611562 22.72870244677681 30.552842432870907 26.554067476740723 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 587.0 1 724.0 2 861.0 3 4072.5 4 7284.0 5 4826.5 6 2369.0 7 1954.5 8 1540.0 9 1454.0 10 1368.0 11 1300.0 12 1232.0 13 1186.0 14 1140.0 15 1096.0 16 1052.0 17 1049.5 18 1047.0 19 1096.0 20 1145.0 21 1273.5 22 1402.0 23 1554.0 24 1706.0 25 1944.0 26 2560.0 27 2938.0 28 3499.0 29 4060.0 30 4759.5 31 5459.0 32 5985.0 33 6511.0 34 6826.0 35 7141.0 36 7545.0 37 7949.0 38 8666.0 39 9383.0 40 10612.5 41 11842.0 42 13111.5 43 14381.0 44 17939.0 45 21497.0 46 25892.0 47 30287.0 48 24049.5 49 17812.0 50 16404.5 51 14997.0 52 13315.0 53 11633.0 54 10766.0 55 9899.0 56 9487.0 57 9075.0 58 8638.0 59 8201.0 60 7684.0 61 7167.0 62 6447.5 63 5728.0 64 4795.0 65 3862.0 66 3154.0 67 2446.0 68 2019.0 69 1592.0 70 1384.5 71 1177.0 72 950.0 73 723.0 74 593.5 75 346.0 76 228.0 77 180.0 78 132.0 79 92.0 80 52.0 81 47.0 82 42.0 83 28.0 84 14.0 85 9.0 86 4.0 87 4.0 88 4.0 89 4.0 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 241624.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.93238997518466 #Duplication Level Percentage of deduplicated Percentage of total 1 75.41264250216997 33.13057619464517 2 8.821489596661 7.750982422450911 3 3.9652862295670404 5.2261350300170655 4 2.5170791432633512 4.423252100809971 5 1.8224613816314634 4.003254206627365 6 1.4830375689714803 3.9092030896742944 7 1.1237461328179617 3.455819733804505 8 0.961071268450832 3.377772620762188 9 0.7325297921720658 2.8963606048329757 >10 3.0558667031936895 19.276186853136494 >50 0.05389183599488087 1.6717866580670961 >100 0.038921881551858405 3.5575339479560495 >500 0.003991987851472657 1.0465656314728975 >1k 0.007983975702945314 6.274570905743039 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCG 2643 1.0938482932159057 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2604 1.0777075124987583 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGC 1885 0.7801377346621197 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTC 1818 0.7524087011224051 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCG 1610 0.6663245372976194 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1432 0.5926563586398702 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGC 1256 0.5198159123265901 No Hit GAATCTATCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTC 1063 0.4399397410853227 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCG 665 0.27522100453597326 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTT 626 0.25908022381882595 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCT 551 0.22804026090123497 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 545 0.2255570638678277 No Hit GAATCTATCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTT 497 0.20569148760056946 No Hit GAATATGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTC 494 0.20444988908386585 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 452 0.1870675098500149 No Hit GCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 449 0.18582591133331125 TruSeq Adapter, Index 21 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTC 423 0.17506539085521305 No Hit GAATGAATGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCT 402 0.16637420123828758 No Hit GAACTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCT 357 0.147750223487733 No Hit GCTGTCACTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTCTTCTGC 283 0.11712412674237659 TruSeq Adapter, Index 21 (95% over 23bp) GAATAATACGGCTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGC 278 0.11505479588120385 No Hit GAATGAACTGTCTCTTATACACATCTGACGCTTCCGGTTTCGTATGCCGTC 265 0.10967453564215475 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 255 0.10553587391980929 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.138661722345462E-4 0.0 0.0 0.09229215640830381 0.0 2 4.138661722345462E-4 0.0 0.0 0.6650829387809158 0.0 3 4.138661722345462E-4 0.0 0.0 0.7805516008343542 0.0 4 4.138661722345462E-4 0.0 0.0 1.164619408668013 0.0 5 4.138661722345462E-4 0.0 0.0 3.0270171837234714 0.0 6 4.138661722345462E-4 0.0 0.0 3.37466476840049 0.0 7 4.138661722345462E-4 0.0 0.0 4.103483097705526 0.0 8 4.138661722345462E-4 0.0 0.0 5.021852133893984 0.0 9 4.138661722345462E-4 0.0 0.0 5.22630202297785 0.0 10 4.138661722345462E-4 0.0 0.0 8.749130881038308 0.0 11 4.138661722345462E-4 0.0 0.0 9.331440585372315 0.0 12 4.138661722345462E-4 0.0 0.0 11.821259477535344 0.0 13 4.138661722345462E-4 0.0 0.0 12.15773267556203 0.0 14 4.138661722345462E-4 0.0 0.0 12.341903122206404 0.0 15 4.138661722345462E-4 0.0 0.0 12.770668476641394 0.0 16 4.138661722345462E-4 0.0 0.0 13.208952753037778 0.0 17 4.138661722345462E-4 0.0 0.0 13.651375691156508 0.0 18 4.138661722345462E-4 0.0 0.0 14.10124822037546 0.0 19 4.138661722345462E-4 0.0 0.0 14.402956659934443 0.0 20 4.138661722345462E-4 0.0 0.0 14.696801642220972 0.0 21 4.138661722345462E-4 0.0 0.0 15.028722312353077 0.0 22 4.138661722345462E-4 0.0 0.0 15.407823726119922 0.0 23 4.138661722345462E-4 0.0 0.0 15.745952388835546 0.0 24 4.138661722345462E-4 0.0 0.0 16.063387742939444 0.0 25 4.138661722345462E-4 0.0 0.0 16.330331424030724 0.0 26 4.138661722345462E-4 0.0 0.0 16.57492633182134 0.0 27 4.138661722345462E-4 0.0 0.0 16.81869350726749 0.0 28 4.138661722345462E-4 0.0 0.0 17.07984306194749 0.0 29 4.138661722345462E-4 0.0 0.0 17.356305665000164 0.0 30 4.138661722345462E-4 0.0 0.0 17.65884183690362 0.0 31 4.138661722345462E-4 0.0 0.0 17.957239347084727 0.0 32 4.138661722345462E-4 0.0 0.0 18.251912061715725 0.0 33 4.138661722345462E-4 0.0 0.0 18.513889348740193 0.0 34 4.138661722345462E-4 0.0 0.0 18.82511671026057 0.0 35 4.138661722345462E-4 0.0 0.0 19.13924113498659 0.0 36 4.138661722345462E-4 0.0 0.0 19.41528987186703 0.0 37 4.138661722345462E-4 0.0 0.0 19.714101248220377 0.0 38 4.138661722345462E-4 0.0 0.0 20.00297983644009 0.0 39 8.277323444690924E-4 0.0 0.0 20.31172400092706 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGCGAT 95 0.0 45.000004 7 AACGGCT 120 0.0 45.000004 7 CTACGAA 30 2.158362E-6 45.000004 11 TACGAAT 30 2.158362E-6 45.000004 12 CGAATAT 30 2.158362E-6 45.000004 14 CTTCGAT 20 7.022218E-4 45.0 32 ATAGGCG 40 6.7757355E-9 45.0 5 AACCCCG 20 7.022218E-4 45.0 37 GCGCGAC 25 3.8816324E-5 45.0 9 CGACAGG 20 7.022218E-4 45.0 3 ACCTATC 20 7.022218E-4 45.0 3 ACGGCTC 20 7.022218E-4 45.0 33 GTCGTTT 25 3.8816324E-5 45.0 9 TAAGGTG 20 7.022218E-4 45.0 5 ACATAGT 45 3.8198777E-10 45.0 35 AGGGCGC 20 7.022218E-4 45.0 7 CCACGGT 20 7.022218E-4 45.0 43 CCTGCGT 20 7.022218E-4 45.0 22 TGCGTTC 20 7.022218E-4 45.0 24 ACGGTGT 20 7.022218E-4 45.0 45 >>END_MODULE