##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551100_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 316994 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93968024631381 31.0 31.0 34.0 30.0 34.0 2 32.12542193227632 33.0 31.0 34.0 30.0 34.0 3 31.90478368675748 33.0 31.0 34.0 30.0 34.0 4 35.736856218098765 37.0 35.0 37.0 35.0 37.0 5 32.10499567815164 37.0 35.0 37.0 10.0 37.0 6 33.950926515959296 37.0 35.0 37.0 19.0 37.0 7 20.798636567253638 32.0 0.0 37.0 0.0 37.0 8 28.063764613841272 35.0 17.0 37.0 17.0 37.0 9 34.70838880231172 35.0 32.0 39.0 30.0 39.0 10 36.25869574818451 37.0 35.0 39.0 32.0 39.0 11 36.69103200691496 38.0 35.0 39.0 33.0 39.0 12 37.040584364372826 39.0 37.0 39.0 34.0 39.0 13 36.80250099370966 39.0 37.0 39.0 33.0 39.0 14 38.2250358050941 40.0 38.0 41.0 34.0 41.0 15 38.368849252667246 40.0 38.0 41.0 34.0 41.0 16 38.477781913853256 40.0 38.0 41.0 34.0 41.0 17 38.407067641658834 40.0 38.0 41.0 34.0 41.0 18 38.302762828318514 40.0 37.0 41.0 34.0 41.0 19 38.219606680252625 40.0 37.0 41.0 34.0 41.0 20 38.18294983501265 40.0 37.0 41.0 34.0 41.0 21 38.120604806400124 40.0 37.0 41.0 34.0 41.0 22 38.08326656025035 40.0 37.0 41.0 34.0 41.0 23 38.0160192306479 40.0 36.0 41.0 34.0 41.0 24 37.86474191940542 40.0 36.0 41.0 33.0 41.0 25 37.73393818179524 40.0 36.0 41.0 33.0 41.0 26 37.551095604333206 40.0 35.0 41.0 33.0 41.0 27 37.49264023924743 39.0 35.0 41.0 33.0 41.0 28 37.395755124702674 39.0 35.0 41.0 33.0 41.0 29 37.33958055988442 40.0 35.0 41.0 33.0 41.0 30 37.18233783604737 39.0 35.0 41.0 32.0 41.0 31 37.048407856300116 39.0 35.0 41.0 32.0 41.0 32 36.87870117415471 39.0 35.0 41.0 31.0 41.0 33 36.71274535164704 39.0 35.0 41.0 31.0 41.0 34 36.52407301084563 39.0 35.0 41.0 30.0 41.0 35 36.305488431957706 39.0 35.0 41.0 30.0 41.0 36 36.165460544994545 39.0 35.0 41.0 29.0 41.0 37 36.02626232673174 39.0 35.0 41.0 29.0 41.0 38 35.933882029312855 39.0 35.0 41.0 28.0 41.0 39 35.87113636220244 39.0 35.0 41.0 27.0 41.0 40 35.73627261083806 39.0 35.0 40.0 27.0 41.0 41 35.633668145138394 39.0 35.0 40.0 26.0 41.0 42 35.54966655520294 39.0 35.0 40.0 26.0 41.0 43 35.447245058266084 38.0 35.0 40.0 26.0 41.0 44 35.306542079660815 38.0 34.0 40.0 25.0 41.0 45 35.25056310214073 38.0 34.0 40.0 24.0 41.0 46 35.12003066304094 38.0 34.0 40.0 24.0 41.0 47 35.0443162962075 38.0 34.0 40.0 24.0 41.0 48 34.92439289071717 38.0 34.0 40.0 23.0 41.0 49 34.81728676252548 38.0 34.0 40.0 24.0 41.0 50 34.67089913373755 38.0 34.0 40.0 23.0 41.0 51 32.8298769061875 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 18.0 10 21.0 11 14.0 12 6.0 13 9.0 14 8.0 15 20.0 16 48.0 17 96.0 18 171.0 19 257.0 20 408.0 21 690.0 22 1208.0 23 1724.0 24 2588.0 25 3429.0 26 4436.0 27 4814.0 28 5019.0 29 5597.0 30 6597.0 31 8278.0 32 10896.0 33 16075.0 34 22014.0 35 27837.0 36 34467.0 37 58025.0 38 62033.0 39 40177.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96422014296801 19.44989495069307 23.35312340296662 14.232761503372304 2 34.049540369849275 24.906780569979244 25.76578736506054 15.277891695110949 3 31.300592440235462 24.97649797787971 28.616314504375477 15.106595077509352 4 28.44312510646889 24.06386240749036 30.20404171687792 17.288970769162823 5 23.725370196281318 36.53349905676448 23.82505662567746 15.916074121276743 6 25.2307614655167 35.53032549511978 26.425105837965386 12.813807201398134 7 46.03336340750929 43.49861511574352 7.585317072247425 2.8827044044997696 8 77.88223120942352 7.398878212205909 11.139958485018644 3.578932093351925 9 71.59536142639924 9.291027590427579 12.938099774759143 6.17551120841404 10 40.44303677672133 27.156034499075695 19.176388196622018 13.224540527580963 11 32.05991280592062 25.515624901417695 26.862338088418074 15.562124204243613 12 30.055142999552043 23.17741029798671 29.174684694347526 17.59276200811372 13 23.376783156778995 25.379660182842578 31.651387723426943 19.592168936951488 14 19.604472008933925 28.904963500886456 30.61193587260327 20.878628617576357 15 18.408234856180243 26.58315299343205 36.548641299204405 18.459970851183304 16 22.399162129251657 23.56606118727799 35.16501889625671 18.869757787213636 17 21.091881865271898 23.910231739402008 32.46055130381016 22.537335091515928 18 22.188432588629436 26.47431812589513 30.843801459964542 20.493447825510895 19 24.950945443762343 26.438670763484485 28.985091200464364 19.62529259228881 20 27.1667602541373 24.652832545726415 30.716669716146043 17.463737483990233 21 24.931702177328276 25.994813781964325 29.193612497397424 19.879871543309967 22 22.412096128002425 26.216900004416487 29.781005318712655 21.589998548868433 23 24.105503574200142 26.44876559177776 29.64819523397919 19.797535600042902 24 22.176760443415333 25.300478873417166 31.096803094064875 21.42595758910263 25 22.382758033275078 27.28537448658334 29.68541991331066 20.646447566830915 26 21.49252036316145 28.504009539612735 30.279752929077524 19.723717168148294 27 22.43891051565645 28.288863511612206 30.155460355716514 19.116765617014835 28 20.87326574004555 28.62167738190628 31.7482349823656 18.756821895682567 29 22.589071086518988 27.123226307122533 30.593323532937532 19.694379073420947 30 22.09316264661161 26.821012385092462 30.452311400215777 20.633513568080154 31 23.272049313236213 27.711880981974424 28.230502785541685 20.78556691924768 32 24.780910679697406 28.311892338656254 28.882250137226574 18.024946844419766 33 23.481201536937608 28.330189214937825 28.80527707149031 19.38333217663426 34 23.061635235998157 27.888540477106822 29.085408556628835 19.96441573026619 35 22.713048196495834 26.543089143643094 28.930516035003816 21.813346624857253 36 23.964806904862552 28.92452223070468 27.95163315393982 19.159037710492942 37 22.777087263481327 29.3570225303949 29.501504760342467 18.36438544578131 38 21.857826962024518 28.607481529618855 28.38634169731919 21.148349811037434 39 24.081843820387768 26.951298762752607 28.090752506356587 20.876104910503038 40 22.686864735610136 26.504918074159136 30.643166747635604 20.165050442595128 41 20.504173580572502 28.570256850287386 29.505921247720778 21.41964832141933 42 22.403578616629968 27.99800627141208 28.983829346927703 20.614585765030252 43 23.724739269512988 26.99704095345653 28.555114607847464 20.72310516918301 44 22.025968945784463 28.626093869284592 28.59833309147807 20.749604093452874 45 21.66665615122053 27.702732543833637 28.187915228679405 22.442696076266426 46 21.330687647084805 29.70529410651306 28.016618611077813 20.94739963532433 47 22.28527984756809 27.796425168930643 30.303412682889896 19.61488230061137 48 22.68244824823183 27.06202641059452 28.859536773566692 21.395988567606956 49 20.737616484854605 28.57309602074487 29.127365186722777 21.561922307677747 50 19.88428803068828 28.486974516867825 29.103074506142075 22.52566294630182 51 20.310479062695194 28.25100790551241 28.15857713395206 23.279935897840335 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 354.0 1 796.0 2 1238.0 3 3496.0 4 5754.0 5 3990.0 6 2226.0 7 1966.5 8 1707.0 9 1642.0 10 1577.0 11 1547.5 12 1518.0 13 1514.0 14 1510.0 15 1624.5 16 1739.0 17 1711.5 18 1684.0 19 1699.0 20 1714.0 21 1872.0 22 2030.0 23 2188.0 24 2346.0 25 2984.5 26 4229.0 27 4835.0 28 5689.0 29 6543.0 30 7216.5 31 7890.0 32 9009.5 33 10129.0 34 10620.0 35 11111.0 36 11693.5 37 12276.0 38 13474.5 39 14673.0 40 15761.5 41 16850.0 42 17843.5 43 18837.0 44 19469.5 45 20102.0 46 21570.5 47 23039.0 48 20971.0 49 18903.0 50 18439.0 51 17975.0 52 16639.0 53 15303.0 54 15040.5 55 14778.0 56 14804.0 57 14830.0 58 14752.0 59 14674.0 60 14420.5 61 14167.0 62 12523.0 63 10879.0 64 8856.0 65 6833.0 66 5702.0 67 4571.0 68 3826.5 69 3082.0 70 2597.0 71 2112.0 72 1760.5 73 1409.0 74 1200.5 75 761.0 76 530.0 77 403.5 78 277.0 79 220.0 80 163.0 81 126.5 82 90.0 83 70.5 84 51.0 85 45.5 86 40.0 87 29.0 88 18.0 89 12.0 90 6.0 91 5.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 316994.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.30225537450893 #Duplication Level Percentage of deduplicated Percentage of total 1 67.87650688698564 21.925642593930245 2 8.207381392271499 5.302338593782932 3 4.267202695796049 4.135208136431908 4 3.0649838699714063 3.960235667462682 5 2.4961962335677956 4.031638410079713 6 1.8176757114312436 3.5229015011216545 7 1.5278860049523035 3.4547914740575267 8 1.42396170546867 3.6797739722856195 9 1.2101176262187145 3.518057573578032 >10 8.006162193884421 41.51559708906124 >50 0.0669511816009781 1.5225871700905245 >100 0.02997814101536333 1.9296218153065834 >500 0.002997814101536333 0.5852131734946195 >1k 0.001998542734357555 0.9163928293167265 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1787 0.563733067502855 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1052 0.33186748014157996 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCG 704 0.22208622245215998 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGC 572 0.18044505574237998 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTC 537 0.169403837296605 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCG 469 0.14795232717338497 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 404 0.12744720720266 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGC 362 0.11419774506772999 No Hit GAATCTATCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTC 336 0.10599569707943998 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.3092676833E-4 0.0 0.0 0.022397900275714998 0.0 2 6.3092676833E-4 0.0 0.0 0.140381205953425 0.0 3 6.3092676833E-4 0.0 0.0 0.17918320220571998 0.0 4 6.3092676833E-4 0.0 0.0 0.25994182855195996 0.0 5 6.3092676833E-4 0.0 0.0 0.6063206243651299 0.0 6 6.3092676833E-4 0.0 0.0 0.705060663608775 0.0 7 6.3092676833E-4 0.0 0.0 0.870363476911235 0.0 8 6.3092676833E-4 0.0 0.0 1.1858268610762348 0.0 9 6.3092676833E-4 0.0 0.0 1.305702947058935 0.0 10 6.3092676833E-4 0.0 0.0 2.00887083036272 0.0 11 6.3092676833E-4 0.0 0.0 2.310138362240295 0.0 12 6.3092676833E-4 0.0 0.0 2.89406108632971 0.0 13 6.3092676833E-4 0.0 0.0 3.0085742947816048 0.0 14 6.3092676833E-4 0.0 0.0 3.0688278011571195 0.0 15 6.3092676833E-4 0.0 0.0 3.1924894477497996 0.0 16 6.3092676833E-4 0.0 0.0 3.3644169921197244 0.0 17 6.3092676833E-4 0.0 0.0 3.5559032663078796 0.0 18 6.3092676833E-4 0.0 0.0 3.7514905644901795 0.0 19 6.3092676833E-4 0.0 0.0 3.8868243562969647 0.0 20 6.3092676833E-4 0.0 0.0 4.030044732707875 0.0 21 6.3092676833E-4 0.0 0.0 4.203549593998624 0.0 22 6.3092676833E-4 0.0 0.0 4.37926269897853 0.0 23 6.3092676833E-4 0.0 0.0 4.573588143624169 0.0 24 6.3092676833E-4 0.0 0.0 4.7341590061641545 0.0 25 6.3092676833E-4 0.0 0.0 4.8748556755017445 0.0 26 6.3092676833E-4 0.0 0.0 5.01839151529682 0.0 27 6.3092676833E-4 0.0 0.0 5.1512016000302845 0.0 28 6.3092676833E-4 0.0 0.0 5.294106513057029 0.0 29 6.3092676833E-4 0.0 0.0 5.443951620535405 0.0 30 6.3092676833E-4 0.0 0.0 5.63985438210187 0.0 31 6.3092676833E-4 0.0 0.0 5.821245827996744 0.0 32 6.3092676833E-4 0.0 0.0 6.003268200659949 0.0 33 6.3092676833E-4 0.0 0.0 6.174564818261544 0.0 34 6.3092676833E-4 0.0 0.0 6.34523050909481 0.0 35 6.3092676833E-4 0.0 0.0 6.522205467611374 0.0 36 6.3092676833E-4 0.0 0.0 6.720316472866994 0.0 37 6.3092676833E-4 0.0 0.0 6.910225430134324 0.0 38 6.3092676833E-4 0.0 0.0 7.103919948011634 0.0 39 6.3092676833E-4 0.0 0.0 7.290043344668984 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAAAG 30 2.1605101E-6 45.000004 2 GTAGACG 30 2.1605101E-6 45.000004 1 CGGGCAT 30 2.1605101E-6 45.000004 6 GATCGTA 25 3.8843922E-5 45.0 10 GTTTCGA 20 7.025547E-4 45.0 11 GCGAAGA 20 7.025547E-4 45.0 1 CGTTGCG 20 7.025547E-4 45.0 11 CGTTGCC 20 7.025547E-4 45.0 43 CACGCTT 20 7.025547E-4 45.0 19 CACGCAA 20 7.025547E-4 45.0 18 ATAGAAC 20 7.025547E-4 45.0 37 CGCGAGA 20 7.025547E-4 45.0 16 CGACAAT 20 7.025547E-4 45.0 20 CGACAAG 20 7.025547E-4 45.0 2 CGTTATT 175 0.0 45.0 1 TATGACA 20 7.025547E-4 45.0 33 ACGATCC 20 7.025547E-4 45.0 22 CGGGCAA 25 3.8843922E-5 45.0 6 CATACGA 35 1.2082091E-7 45.0 18 GCGATAC 20 7.025547E-4 45.0 9 >>END_MODULE