##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551098_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 566523 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72845586145664 31.0 31.0 34.0 30.0 34.0 2 31.910600275716963 33.0 31.0 34.0 30.0 34.0 3 31.350338821195255 31.0 31.0 34.0 28.0 34.0 4 35.381567915159664 37.0 35.0 37.0 33.0 37.0 5 31.824337229026888 37.0 35.0 37.0 0.0 37.0 6 33.78676946920072 37.0 35.0 37.0 19.0 37.0 7 21.049071264538245 32.0 0.0 37.0 0.0 37.0 8 28.26296196270937 35.0 17.0 37.0 17.0 37.0 9 34.8905322467049 37.0 32.0 39.0 32.0 39.0 10 36.274008292690674 37.0 35.0 39.0 32.0 39.0 11 36.734651549892945 38.0 37.0 39.0 33.0 39.0 12 37.148458226762195 39.0 37.0 39.0 34.0 39.0 13 37.005713801557924 39.0 37.0 39.0 33.0 39.0 14 38.440845296660505 40.0 38.0 41.0 34.0 41.0 15 38.57512228100183 40.0 38.0 41.0 34.0 41.0 16 38.60545114673191 40.0 38.0 41.0 34.0 41.0 17 38.55976897672292 40.0 38.0 41.0 34.0 41.0 18 38.39943656303451 40.0 38.0 41.0 34.0 41.0 19 38.25776888140464 40.0 37.0 41.0 34.0 41.0 20 38.14746974085783 40.0 37.0 41.0 34.0 41.0 21 38.065806683929864 40.0 37.0 41.0 34.0 41.0 22 37.99054936869289 39.0 36.0 41.0 34.0 41.0 23 37.88908129060956 39.0 36.0 41.0 33.0 41.0 24 37.73469744388136 39.0 35.0 41.0 33.0 41.0 25 37.581245598148705 39.0 35.0 41.0 33.0 41.0 26 37.46753618123183 39.0 35.0 41.0 33.0 41.0 27 37.41953636480778 39.0 35.0 41.0 33.0 41.0 28 37.34762401526505 39.0 35.0 41.0 33.0 41.0 29 37.32961415511815 39.0 35.0 41.0 33.0 41.0 30 37.152588685719735 39.0 35.0 41.0 33.0 41.0 31 36.983047466740096 39.0 35.0 41.0 32.0 41.0 32 36.79763222322836 39.0 35.0 41.0 31.0 41.0 33 36.48792193785601 39.0 35.0 41.0 30.0 41.0 34 36.15478630170355 39.0 35.0 41.0 29.0 41.0 35 35.83256637418075 39.0 35.0 41.0 26.0 41.0 36 35.50703501887831 39.0 35.0 40.0 25.0 41.0 37 35.365483837372885 39.0 35.0 40.0 24.0 41.0 38 35.24645248295303 39.0 35.0 40.0 23.0 41.0 39 35.1498279858011 39.0 35.0 40.0 23.0 41.0 40 35.06748004935369 39.0 35.0 40.0 22.0 41.0 41 34.93359669422071 39.0 35.0 40.0 22.0 41.0 42 34.79545578908535 38.0 34.0 40.0 21.0 41.0 43 34.70149843872182 38.0 34.0 40.0 21.0 41.0 44 34.58493829906288 38.0 34.0 40.0 20.0 41.0 45 34.540256971032065 38.0 34.0 40.0 20.0 41.0 46 34.423366747687204 38.0 34.0 40.0 20.0 41.0 47 34.37511098402007 38.0 34.0 40.0 20.0 41.0 48 34.228410850044924 38.0 33.0 40.0 19.0 41.0 49 34.08398599880323 38.0 33.0 40.0 18.0 41.0 50 33.9211982567345 38.0 33.0 40.0 18.0 41.0 51 32.16301191655061 36.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 27.0 10 23.0 11 20.0 12 11.0 13 8.0 14 16.0 15 12.0 16 23.0 17 77.0 18 171.0 19 356.0 20 624.0 21 1129.0 22 2232.0 23 3889.0 24 6509.0 25 9531.0 26 11670.0 27 11759.0 28 10949.0 29 10900.0 30 11741.0 31 14574.0 32 18905.0 33 26374.0 34 35851.0 35 48621.0 36 62405.0 37 102850.0 38 106287.0 39 68960.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.742414694549026 20.39158163040159 23.541144843192598 20.324858831856783 2 35.915399727813345 24.185778865112272 25.231808770341186 14.667012636733196 3 28.40220079325994 23.446003074897224 34.5121027742916 13.639693357551238 4 24.713383216568435 24.29821913673408 35.1976883551065 15.790709291590984 5 20.6729470824662 35.2598217548096 29.537370945221998 14.529860217502202 6 22.60420141812424 32.7829585030087 31.5828307059025 13.030009372964557 7 45.18686796476048 41.626553555636754 10.652347742280543 2.5342307373222273 8 78.74649396405795 3.8240283271817734 14.755093791425944 2.674383917334336 9 72.68036778736257 7.270137311283037 15.943042030067623 4.106452871286779 10 30.819048829438522 35.4354545181749 22.334839009184094 11.410657643202482 11 24.20237130707844 25.713519133380284 34.7560469742623 15.328062585278973 12 23.918005094232715 22.806664513179516 36.40981919533717 16.865511197250598 13 20.318680794954485 23.83098303158036 37.901020788211596 17.949315385253556 14 17.6640665957075 27.81475774152153 35.84391101508677 18.677264647684208 15 17.616936999909978 26.603862508671316 38.70663680027113 17.07256369114758 16 21.009561835971354 26.10503015764585 36.10956660188553 16.775841404497257 17 20.223362511319046 25.417326392750162 35.46051969646422 18.89879139946657 18 20.47595596295296 25.896565541028345 35.35408094640465 18.27339754961405 19 21.122531653613358 26.67958758955947 33.91265667942873 18.285224077398446 20 22.055768256540333 26.522488936901063 34.728863611892194 16.692879194666414 21 21.54140255558909 25.82225258286071 35.63703503652985 16.999309825020344 22 21.088640708320757 24.210844043401593 34.835125846611696 19.86538940166595 23 19.788958259417537 26.269542454587015 35.235462637880545 18.706036648114903 24 19.90298716909993 25.254932279889786 36.19199926569618 18.650081285314098 25 19.186864434453675 27.856415361777014 34.11176598302276 18.844954220746555 26 19.494354156848 28.58771841566891 33.324507566330055 18.59341986115303 27 19.133556801753855 28.03822616204461 34.55799676270866 18.270220273492868 28 18.027158650222496 27.867359312861083 35.972237667314474 18.13324436960194 29 19.48482232848446 26.310670528822307 35.291064970001216 18.91344217269202 30 20.247192082227905 27.30586401611232 34.0298628652323 18.417081036427472 31 20.77197218824302 27.376293636798504 33.37834474505007 18.47338942990841 32 21.662315563534047 27.59464311245969 33.1584066313283 17.584634692677966 33 21.118648316131914 27.51732939351094 33.19106196924044 18.172960321116708 34 21.23232419513418 27.04620995087578 33.61769954617906 18.103766307810982 35 21.8125301179299 26.263540933024785 32.75842287073959 19.165506078305736 36 21.867073358010177 28.00451173209208 32.20116394215239 17.92725096774535 37 21.156952144926155 28.336537086755527 32.85921312991705 17.647297638401266 38 21.159070329006944 27.964442749897177 31.823068083731815 19.05341883736406 39 22.185154000808442 27.0769236200472 31.54029050894668 19.19763187019768 40 22.709051530123226 26.908351470284526 32.26488597991609 18.117711019676165 41 20.556799988703016 28.141311120642936 31.79782639010243 19.504062500551612 42 21.048748241465926 28.30441129486358 31.106062772385236 19.54077769128526 43 21.70220803038888 27.874066895783578 30.958848978770497 19.46487609505704 44 21.546521500450996 28.082884543081217 30.283148256999276 20.08744569946851 45 20.523438589430615 28.244749109921397 29.980600964126786 21.2512113365212 46 21.385539510311144 28.826896701457837 29.45952768025305 20.328036107977965 47 21.022977001816344 27.42342323259603 31.74134148128143 19.812258284306196 48 20.941956460726217 27.07533498198661 31.278694774969416 20.70401378231775 49 20.415058170630317 26.70783004396997 32.15191616227408 20.72519562312563 50 20.088504791508907 27.52350743041324 31.88961436693656 20.498373411141298 51 20.45653927554574 26.742427050622837 31.00527251320776 21.795761160623663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 240.0 1 589.0 2 938.0 3 10785.5 4 20633.0 5 14110.0 6 7587.0 7 6666.5 8 5746.0 9 5706.5 10 5667.0 11 5550.0 12 5433.0 13 5235.0 14 5037.0 15 4762.5 16 4488.0 17 4406.5 18 4325.0 19 4197.0 20 4069.0 21 4127.0 22 4185.0 23 4156.0 24 4127.0 25 4976.0 26 6851.5 27 7878.0 28 8876.5 29 9875.0 30 11440.0 31 13005.0 32 14745.5 33 16486.0 34 18415.0 35 20344.0 36 22088.5 37 23833.0 38 25748.5 39 27664.0 40 29856.0 41 32048.0 42 34011.5 43 35975.0 44 39086.5 45 42198.0 46 46051.5 47 49905.0 48 47344.5 49 44784.0 50 41549.0 51 38314.0 52 33981.0 53 29648.0 54 26755.5 55 23863.0 56 21486.5 57 19110.0 58 17750.0 59 16390.0 60 15184.0 61 13978.0 62 11680.0 63 9382.0 64 7519.0 65 5656.0 66 4407.5 67 3159.0 68 2484.0 69 1809.0 70 1512.5 71 1216.0 72 1046.0 73 876.0 74 667.5 75 329.5 76 200.0 77 135.5 78 71.0 79 51.5 80 32.0 81 27.5 82 23.0 83 20.5 84 18.0 85 17.0 86 16.0 87 9.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 566523.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.33489751428056 #Duplication Level Percentage of deduplicated Percentage of total 1 76.18220612322882 35.29894713131604 2 8.595653769128246 7.965574729215934 3 3.8151392473248786 5.303222580825231 4 2.336277026850677 4.330046264163769 5 1.7014093618235053 3.9417314204964797 6 1.289150333468366 3.5839589149054407 7 1.0234174358958041 3.319395940459192 8 0.8341562702254872 3.092043623343397 9 0.6911545852782291 2.8822119187852646 >10 3.485892592821388 24.87058978302274 >50 0.02681518691117711 0.8551410590458771 >100 0.01617423971934174 1.5525070145912245 >500 0.0017025515494043936 0.5703569977385444 >1k 4.256378873510984E-4 0.8847238906829565 >5k 4.256378873510984E-4 1.5495487314079335 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7857 1.3868810268956424 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4486 0.791847815534409 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTC 886 0.15639259129814675 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 801 0.14138878739256835 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCG 608 0.10732132675990208 No Hit GAATCTATCTCTTATACACATCTGACGCAATGGGGTTCGTATGCCGTCTTC 597 0.10537965801918016 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06372203776369186 0.0 2 0.0 0.0 0.0 0.25700633513555493 0.0 3 0.0 0.0 0.0 0.3606208397540788 0.0 4 0.0 0.0 0.0 0.5208967685336694 0.0 5 0.0 0.0 0.0 1.0020775855525725 0.0 6 0.0 0.0 0.0 1.4114166591647648 0.0 7 0.0 0.0 0.0 1.775214775040025 0.0 8 0.0 0.0 0.0 2.4456200366092817 0.0 9 0.0 0.0 0.0 2.7748211458316785 0.0 10 0.0 0.0 0.0 3.511419659925546 0.0 11 0.0 0.0 0.0 4.114925607609929 0.0 12 0.0 0.0 0.0 4.7032512360486685 0.0 13 0.0 0.0 0.0 4.9832045653927555 0.0 14 0.0 0.0 0.0 5.12353426074493 0.0 15 0.0 0.0 0.0 5.30887536781384 0.0 16 0.0 0.0 0.0 5.623425703810789 0.0 17 0.0 0.0 0.0 6.048298127348757 0.0 18 0.0 0.0 0.0 6.50688498083926 0.0 19 0.0 0.0 0.0 6.790015586304528 0.0 20 0.0 0.0 0.0 7.10244773822069 0.0 21 0.0 0.0 0.0 7.4528306882509625 0.0 22 0.0 0.0 0.0 7.841517467075477 0.0 23 0.0 0.0 0.0 8.238147436202944 0.0 24 0.0 0.0 0.0 8.537340937614184 0.0 25 0.0 0.0 0.0 8.813410929476825 0.0 26 0.0 0.0 0.0 9.066357411790872 0.0 27 0.0 0.0 0.0 9.344016041714106 0.0 28 0.0 0.0 0.0 9.638443628943573 0.0 29 0.0 0.0 0.0 9.941520467836257 0.0 30 0.0 0.0 0.0 10.282901135523183 0.0 31 0.0 0.0 0.0 10.60645375386348 0.0 32 0.0 0.0 0.0 10.92541697336207 0.0 33 0.0 0.0 0.0 11.242615039460004 0.0 34 0.0 0.0 0.0 11.540396418150719 0.0 35 0.0 0.0 0.0 11.881777085837644 0.0 36 0.0 0.0 0.0 12.210448649039845 0.0 37 0.0 0.0 0.0 12.556948261588673 0.0 38 0.0 0.0 0.0 12.878206180508117 0.0 39 0.0 0.0 0.0 13.237238382201605 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGCG 70 0.0 45.0 5 AGATACG 35 1.2104647E-7 45.0 1 CCGTGCC 25 3.888292E-5 45.0 12 CGTTCTA 40 6.8048394E-9 45.0 1 TTGACGA 20 7.0302555E-4 45.0 1 CGTGTAC 20 7.0302555E-4 45.0 18 ATGCGAA 25 3.888292E-5 45.0 1 CGCACGG 20 7.0302555E-4 45.0 2 TCGGTTA 20 7.0302555E-4 45.0 1 TGCGTAA 20 7.0302555E-4 45.0 1 CGTTATT 735 0.0 44.387756 1 CGTTTTA 1740 0.0 43.83621 1 CGTTTTT 3035 0.0 43.36903 1 TAGGCGA 105 0.0 42.857143 6 AGGCGAT 285 0.0 41.842106 7 CTCGTCC 135 0.0 41.666664 37 CCTCGTC 135 0.0 41.666664 36 TCCTCGT 140 0.0 40.17857 35 TCGTCCC 140 0.0 40.17857 38 CGGTTTT 325 0.0 40.153847 1 >>END_MODULE