##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551097_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 288697 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07917643757988 33.0 31.0 34.0 30.0 34.0 2 32.27305444808918 33.0 31.0 34.0 30.0 34.0 3 32.11313245374909 33.0 31.0 34.0 30.0 34.0 4 35.858110752796186 37.0 35.0 37.0 35.0 37.0 5 32.07423353896992 37.0 35.0 37.0 0.0 37.0 6 33.998628319656945 37.0 35.0 37.0 19.0 37.0 7 20.71551141854609 32.0 0.0 37.0 0.0 37.0 8 28.081756997821245 35.0 17.0 37.0 17.0 37.0 9 34.91735625933072 37.0 32.0 39.0 32.0 39.0 10 36.32086928509822 37.0 35.0 39.0 32.0 39.0 11 36.7742373491931 39.0 37.0 39.0 33.0 39.0 12 37.13156700623838 39.0 37.0 39.0 34.0 39.0 13 36.9168851771927 39.0 37.0 39.0 33.0 39.0 14 38.37982382913574 40.0 38.0 41.0 34.0 41.0 15 38.51797559378864 40.0 38.0 41.0 34.0 41.0 16 38.599029432242105 40.0 38.0 41.0 34.0 41.0 17 38.57241675528322 40.0 38.0 41.0 34.0 41.0 18 38.47387052861651 40.0 38.0 41.0 34.0 41.0 19 38.39624935485994 40.0 37.0 41.0 34.0 41.0 20 38.3708143832461 40.0 37.0 41.0 34.0 41.0 21 38.333255974256744 40.0 37.0 41.0 34.0 41.0 22 38.292081317090236 40.0 37.0 41.0 34.0 41.0 23 38.274097063703465 40.0 37.0 41.0 34.0 41.0 24 38.15321946539105 40.0 37.0 41.0 34.0 41.0 25 38.027689930965686 40.0 36.0 41.0 33.0 41.0 26 37.88745293508419 40.0 36.0 41.0 33.0 41.0 27 37.88282870968524 40.0 36.0 41.0 33.0 41.0 28 37.80397440915562 40.0 36.0 41.0 33.0 41.0 29 37.797552451185844 40.0 36.0 41.0 33.0 41.0 30 37.68507466305504 40.0 36.0 41.0 33.0 41.0 31 37.568578821394055 40.0 36.0 41.0 33.0 41.0 32 37.45746924976706 40.0 36.0 41.0 33.0 41.0 33 37.30433638035726 40.0 36.0 41.0 32.0 41.0 34 37.169672701829256 40.0 36.0 41.0 32.0 41.0 35 37.05170126464771 40.0 36.0 41.0 31.0 41.0 36 36.907030554526024 40.0 35.0 41.0 31.0 41.0 37 36.82525970134778 40.0 35.0 41.0 31.0 41.0 38 36.7613761140573 40.0 35.0 41.0 31.0 41.0 39 36.70004884013343 40.0 35.0 41.0 31.0 41.0 40 36.548672137223456 39.0 35.0 41.0 30.0 41.0 41 36.43275475671725 39.0 35.0 41.0 30.0 41.0 42 36.3438345393267 39.0 35.0 41.0 30.0 41.0 43 36.274921457445004 39.0 35.0 41.0 30.0 41.0 44 36.17990834681344 39.0 35.0 41.0 29.0 41.0 45 36.12286930588125 39.0 35.0 40.0 29.0 41.0 46 36.03205783226012 39.0 35.0 40.0 29.0 41.0 47 35.98998950456707 39.0 35.0 40.0 28.0 41.0 48 35.93002698330776 39.0 35.0 40.0 28.0 41.0 49 35.78501681693956 39.0 35.0 40.0 28.0 41.0 50 35.68681351035861 39.0 35.0 40.0 27.0 41.0 51 33.84443205159735 37.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 13.0 10 20.0 11 5.0 12 11.0 13 3.0 14 10.0 15 12.0 16 20.0 17 54.0 18 61.0 19 132.0 20 227.0 21 424.0 22 687.0 23 1123.0 24 1708.0 25 2424.0 26 2983.0 27 3393.0 28 3665.0 29 4143.0 30 5088.0 31 6523.0 32 8804.0 33 12926.0 34 18603.0 35 24307.0 36 30335.0 37 54788.0 38 63370.0 39 42820.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.3204536243882 20.81351728628978 27.15407503368584 13.711954055636186 2 30.717326470313168 25.166870455875884 27.659795564207457 16.45600750960349 3 31.269116062861755 25.03732286792035 28.452668368566354 15.240892700651548 4 27.03491896348074 25.350453936133732 29.680599382743843 17.93402771764168 5 22.260016557151616 37.579538408781524 24.372958499741944 15.787486534324916 6 24.825335905811283 35.61519517002255 25.980526295735668 13.578942628430498 7 48.345150798241754 43.13692210171911 5.926628957003363 2.591298143035778 8 85.65277782588666 4.555294997869739 7.402917245416475 2.38900993082713 9 80.50551270016662 6.569171137905832 8.210684558551007 4.71463160337655 10 40.947775695625516 26.876621509748976 17.404060312369023 14.771542482256484 11 32.15135591987447 28.755061535104282 23.620266230684766 15.473316314336486 12 30.940744101947715 23.605718105834146 28.014492703422622 17.439045088795517 13 23.443956812852228 26.641080440738907 28.53164390346973 21.383318842939136 14 19.209759713471218 29.86349009515166 28.661191491425264 22.265558699951853 15 18.617789585620912 27.251062532689986 35.39039200268794 18.740755879001167 16 21.222596701732265 24.35598568741622 34.395230986120396 20.026186624731118 17 21.061874560525396 24.752595281558172 30.330069242146614 23.85546091576982 18 22.290151958627906 26.968759633802915 30.23342812706748 20.507660280501703 19 25.048753537445833 27.59363623452963 26.686803118840864 20.670807109183677 20 27.240671014939537 26.063312053814208 28.593300242122368 18.10271668912389 21 25.790707904827553 26.650779190639323 28.087926095525763 19.47058680900737 22 23.006473915558526 26.52192437053381 28.398978860189057 22.072622853718606 23 23.480327124978785 27.79384614318819 28.278783638208914 20.447043093624114 24 22.345227002705258 25.299189115231542 30.968454815948903 21.387129066114298 25 21.642414018850214 27.641090832256655 29.357076796780014 21.359418352113117 26 21.293605406360303 29.714198623470285 28.988870684489278 20.003325285680145 27 22.2877272711528 30.103534155186928 28.28640408455924 19.322334489101028 28 19.928159973951928 29.63834054389204 31.20676695635909 19.226732525796944 29 21.380201387614004 28.23652479935711 29.766156212222505 20.61711760080638 30 21.47649611876812 27.426332798747477 29.92168259455415 21.175488487930252 31 22.496943161861743 28.9005427836105 27.785186545062817 20.817327509464942 32 24.34905800891592 28.880106132034623 26.64489066391407 20.125945195135383 33 22.773703917948577 30.122931654987756 26.73495048441792 20.36841394264575 34 21.86548526655975 30.23342812706748 28.219205603106374 19.681881003266398 35 22.30366093170348 28.100049532901277 27.670187081957902 21.92610245343734 36 22.43320851965902 29.610629829890854 26.952133205402202 21.004028445047922 37 21.701645670027744 30.387568973699068 28.385816271038493 19.52496908523469 38 22.018586961416293 28.05363408694929 28.341132744711583 21.58664620692283 39 22.847137310051714 27.057433918606705 29.036325282216303 21.059103489125278 40 22.81804106035047 26.592933075161845 30.23273535921745 20.35629050527023 41 19.39091850625396 29.166219254096852 30.453381919451882 20.989480320197302 42 21.84400946320883 28.809097427406588 28.0654111403998 21.281481968984785 43 22.83362833697614 29.58569018728979 27.47413378039952 20.106547695334555 44 22.3438414670052 29.404531394507043 27.389962486620924 20.86166465186684 45 21.101362327977082 28.89569340866029 27.2139994527134 22.788944810649227 46 20.66803603778356 30.69100129201204 27.226815657938946 21.414147012265456 47 21.76399477653041 29.44679023335885 28.877335060634508 19.911879929476235 48 21.84816607030901 27.521934762051565 28.189070201630084 22.440828966009345 49 19.570345379411634 29.427392733558023 29.067499835467636 21.93476205156271 50 18.981146322961447 29.088282870968523 28.644565063024558 23.286005743045475 51 19.39507511335414 29.004111577189928 27.941405695244498 23.65940761421144 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 186.0 1 409.5 2 633.0 3 2167.5 4 3702.0 5 2543.5 6 1385.0 7 1237.5 8 1090.0 9 1029.0 10 968.0 11 961.5 12 955.0 13 941.5 14 928.0 15 870.0 16 812.0 17 877.0 18 942.0 19 956.5 20 971.0 21 1061.5 22 1152.0 23 1441.0 24 1730.0 25 2271.5 26 3310.0 27 3807.0 28 4769.0 29 5731.0 30 6445.0 31 7159.0 32 8191.5 33 9224.0 34 10510.5 35 11797.0 36 12130.5 37 12464.0 38 13341.0 39 14218.0 40 15806.5 41 17395.0 42 18615.0 43 19835.0 44 20584.0 45 21333.0 46 21777.0 47 22221.0 48 20986.0 49 19751.0 50 18779.5 51 17808.0 52 16677.0 53 15546.0 54 14396.0 55 13246.0 56 13070.0 57 12894.0 58 12907.5 59 12921.0 60 12487.5 61 12054.0 62 10556.0 63 9058.0 64 7034.5 65 5011.0 66 3753.5 67 2496.0 68 2095.0 69 1694.0 70 1452.5 71 1211.0 72 942.0 73 673.0 74 521.5 75 319.0 76 268.0 77 195.0 78 122.0 79 91.5 80 61.0 81 45.0 82 29.0 83 22.0 84 15.0 85 13.0 86 11.0 87 6.5 88 2.0 89 3.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 288697.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.303051295995452 #Duplication Level Percentage of deduplicated Percentage of total 1 67.27172968771433 20.385386754971474 2 7.522518403365187 4.559105221044902 3 3.9927300992181425 3.629757150230172 4 2.9262493713136117 3.546971392151633 5 2.232408211787298 3.3824390277695993 6 1.942069406977276 3.5310377316009522 7 1.5831466325270906 3.3581921530185626 8 1.4334049654794019 3.474923535748553 9 1.304238489323762 3.5570165259770623 >10 9.724063828814412 47.71196098331469 >50 0.04115038178409767 0.8694236517871679 >100 0.02400438937405697 1.343276861207425 >500 0.0011430661606693796 0.24454705106045438 >1k 0.0011430661606693796 0.40596196011735486 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1172 0.40596196011735486 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 706 0.24454705106045438 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCG 467 0.1617612929819153 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGC 373 0.12920120403052335 No Hit GAATCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC 299 0.10356879357942755 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.015933660550681163 0.0 2 0.0 0.0 0.0 0.1056470971295164 0.0 3 0.0 0.0 0.0 0.1267765165554197 0.0 4 0.0 0.0 0.0 0.17388473035743357 0.0 5 0.0 0.0 0.0 0.402151736942192 0.0 6 0.0 0.0 0.0 0.46276892381978335 0.0 7 0.0 0.0 0.0 0.5777683869246996 0.0 8 0.0 0.0 0.0 0.8240473576102281 0.0 9 0.0 0.0 0.0 0.9040620442886487 0.0 10 0.0 0.0 0.0 1.4416498959116306 0.0 11 0.0 0.0 0.0 1.6650675275461817 0.0 12 0.0 0.0 0.0 2.11017087119021 0.0 13 0.0 0.0 0.0 2.2012698434691043 0.0 14 0.0 0.0 0.0 2.245260601945985 0.0 15 0.0 0.0 0.0 2.3301246635746127 0.0 16 0.0 0.0 0.0 2.481148054881069 0.0 17 0.0 0.0 0.0 2.6539936334634584 0.0 18 0.0 0.0 0.0 2.852818006421958 0.0 19 0.0 0.0 0.0 2.970242157001978 0.0 20 0.0 0.0 0.0 3.083163316556805 0.0 21 0.0 0.0 0.0 3.2314156364631432 0.0 22 0.0 0.0 0.0 3.3966407686952063 0.0 23 0.0 0.0 0.0 3.556323758127033 0.0 24 0.0 0.0 0.0 3.6993803191581485 0.0 25 0.0 0.0 0.0 3.827195987488613 0.0 26 0.0 0.0 0.0 3.932843084618129 0.0 27 0.0 0.0 0.0 4.055116610148357 0.0 28 0.0 0.0 0.0 4.186049733803953 0.0 29 0.0 0.0 0.0 4.322525000259788 0.0 30 0.0 0.0 0.0 4.48255437361663 0.0 31 0.0 0.0 0.0 4.628382006047864 0.0 32 0.0 0.0 0.0 4.772131334929009 0.0 33 0.0 0.0 0.0 4.915534279885139 0.0 34 0.0 0.0 0.0 5.068982358666699 0.0 35 0.0 0.0 0.0 5.245291776499236 0.0 36 0.0 0.0 0.0 5.414327131906463 0.0 37 0.0 0.0 0.0 5.582669719463659 0.0 38 0.0 0.0 0.0 5.750319539170826 0.0 39 0.0 0.0 0.0 5.929400028403482 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAA 20 7.024498E-4 45.000004 1 GATGTCG 20 7.024498E-4 45.000004 9 CGGCACG 20 7.024498E-4 45.000004 2 ATAGCCG 20 7.024498E-4 45.000004 45 TATGCGG 20 7.024498E-4 45.000004 2 TTATCCG 20 7.024498E-4 45.000004 10 TCTACGG 20 7.024498E-4 45.000004 2 CAGGCGA 20 7.024498E-4 45.000004 6 GTACTAT 20 7.024498E-4 45.000004 9 TTGCGAA 20 7.024498E-4 45.000004 1 CAATCGG 20 7.024498E-4 45.000004 2 ATGGGCG 25 3.883525E-5 45.0 5 CGAATAT 35 1.2076998E-7 45.0 14 AATCGAG 25 3.883525E-5 45.0 1 TACCGGG 25 3.883525E-5 45.0 3 TAGGCAC 65 0.0 44.999996 6 CGTTATT 95 0.0 42.63158 1 CGTTTTA 285 0.0 42.63158 1 TACGGCT 80 0.0 42.187504 7 AAACGGC 60 3.6379788E-12 41.250004 6 >>END_MODULE