SRR3551096_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551096_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	275435
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1338	0.4857770435856009	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	760	0.2759271697496687	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	291	0.10565106104888632	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTTC	20	7.0239377E-4	45.0	27
GTCGCCT	20	7.0239377E-4	45.0	34
ATAGGTA	20	7.0239377E-4	45.0	5
ACCGCTC	20	7.0239377E-4	45.0	18
ACCGCAA	20	7.0239377E-4	45.0	31
GGCCGAT	25	3.883057E-5	45.0	8
TTCGTAA	20	7.0239377E-4	45.0	1
TTACTAT	20	7.0239377E-4	45.0	13
CGACAAG	20	7.0239377E-4	45.0	2
GCGTTCC	20	7.0239377E-4	45.0	28
CGTTCCG	20	7.0239377E-4	45.0	29
GTCAGAC	20	7.0239377E-4	45.0	32
GTTACGG	20	7.0239377E-4	45.0	2
GCTCTAC	20	7.0239377E-4	45.0	22
ACGATGG	25	3.883057E-5	45.0	2
CGGATAG	20	7.0239377E-4	45.0	2
TACTGCG	20	7.0239377E-4	45.0	27
AGACCGC	20	7.0239377E-4	45.0	29
CGAATAT	25	3.883057E-5	45.0	14
TCGTAAG	25	3.883057E-5	45.0	2