##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551095_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 463909 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.861500854693485 31.0 31.0 34.0 30.0 34.0 2 32.04766452041241 33.0 31.0 34.0 30.0 34.0 3 31.69722941352722 33.0 31.0 34.0 30.0 34.0 4 35.59829837317233 37.0 35.0 37.0 33.0 37.0 5 31.99832941374278 37.0 35.0 37.0 0.0 37.0 6 33.90184928509686 37.0 35.0 37.0 19.0 37.0 7 20.881897096197747 32.0 0.0 37.0 0.0 37.0 8 28.164133483075343 35.0 17.0 37.0 17.0 37.0 9 34.83535995205956 37.0 32.0 39.0 32.0 39.0 10 36.22991793649185 37.0 35.0 39.0 32.0 39.0 11 36.63635325031418 38.0 35.0 39.0 32.0 39.0 12 37.06945543199205 39.0 37.0 39.0 34.0 39.0 13 36.933698203742544 39.0 37.0 39.0 33.0 39.0 14 38.386879754434595 40.0 38.0 41.0 34.0 41.0 15 38.52835146548138 40.0 38.0 41.0 34.0 41.0 16 38.563651491995195 40.0 38.0 41.0 34.0 41.0 17 38.51962561623077 40.0 38.0 41.0 34.0 41.0 18 38.39265674949182 40.0 38.0 41.0 34.0 41.0 19 38.29586405954616 40.0 37.0 41.0 34.0 41.0 20 38.20796751086959 40.0 37.0 41.0 34.0 41.0 21 38.13598572133759 40.0 37.0 41.0 34.0 41.0 22 38.09292986339993 40.0 37.0 41.0 34.0 41.0 23 38.0066435443158 40.0 36.0 41.0 34.0 41.0 24 37.858032502063985 40.0 36.0 41.0 33.0 41.0 25 37.710395788829274 40.0 36.0 41.0 33.0 41.0 26 37.570170011791106 39.0 36.0 41.0 33.0 41.0 27 37.53075926528694 39.0 36.0 41.0 33.0 41.0 28 37.397769821236494 39.0 35.0 41.0 33.0 41.0 29 37.36778333681821 39.0 35.0 41.0 33.0 41.0 30 37.21391264235012 39.0 35.0 41.0 32.0 41.0 31 37.079021963359196 39.0 35.0 41.0 32.0 41.0 32 36.913586500800804 39.0 35.0 41.0 31.0 41.0 33 36.62060878318808 39.0 35.0 41.0 30.0 41.0 34 36.38626972100132 39.0 35.0 41.0 30.0 41.0 35 36.15858929229655 39.0 35.0 41.0 29.0 41.0 36 35.92393766881005 39.0 35.0 41.0 27.0 41.0 37 35.79400054752117 39.0 35.0 41.0 26.0 41.0 38 35.65274870718179 39.0 35.0 41.0 25.0 41.0 39 35.568889588259765 39.0 35.0 41.0 25.0 41.0 40 35.4472967758763 39.0 35.0 40.0 24.0 41.0 41 35.340187407444134 39.0 35.0 40.0 24.0 41.0 42 35.230911665865506 39.0 35.0 40.0 23.0 41.0 43 35.13297651047942 39.0 35.0 40.0 23.0 41.0 44 34.984158531091225 39.0 34.0 40.0 23.0 41.0 45 34.91349596580364 38.0 34.0 40.0 23.0 41.0 46 34.76093156200893 38.0 34.0 40.0 22.0 41.0 47 34.76162135246352 38.0 34.0 40.0 22.0 41.0 48 34.65745868262957 38.0 34.0 40.0 22.0 41.0 49 34.4779493392023 38.0 34.0 40.0 20.0 41.0 50 34.32313018285914 38.0 34.0 40.0 20.0 41.0 51 32.51104419185659 36.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 11.0 9 26.0 10 31.0 11 12.0 12 8.0 13 6.0 14 9.0 15 16.0 16 43.0 17 78.0 18 171.0 19 350.0 20 599.0 21 1121.0 22 1905.0 23 2996.0 24 4667.0 25 6863.0 26 7949.0 27 8306.0 28 8144.0 29 8219.0 30 9515.0 31 11688.0 32 15326.0 33 21132.0 34 29507.0 35 38098.0 36 50263.0 37 85405.0 38 91226.0 39 60215.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.695558827270006 21.07697845913746 25.427400632451626 16.80006208114091 2 34.86524296790965 24.2963598464354 25.932887699958396 14.905509485696546 3 30.42514803549834 23.154541084566155 31.064713122616723 15.355597757318783 4 27.038276903444427 24.923638041081333 30.77068994134626 17.267395114127986 5 21.591303466843716 36.11656596444561 26.29696772427351 15.995162844437164 6 25.035513430435714 33.97864667423999 27.947075827371314 13.038764067952982 7 46.983567898014485 42.691993472857824 7.814894731509843 2.509543897617852 8 81.6461849198873 4.572664035403495 11.172234209726478 2.6089168349827228 9 75.16474136091345 7.69547475905835 12.922361928740333 4.217421951287861 10 38.09842016429946 30.440021642175513 19.79396821359361 11.667589979931408 11 27.295654966814613 26.01803370919728 30.388071798563942 16.29823952542417 12 25.661282708462217 23.0915977055845 32.983408383971856 18.263711201981423 13 21.24080369210341 24.743645844335852 34.31535063988843 19.700199823672314 14 19.084346283430587 27.865163210888344 33.452465893095415 19.598024612585657 15 19.03756986822847 26.37672474558588 37.065674518062806 17.520030868122845 16 22.22009057810907 24.64750629972689 35.48368322235611 17.648719899807936 17 21.455500971095624 24.364907772860626 33.21362594819243 20.965965307851324 18 22.378957942182627 25.75483553886646 32.63441752585097 19.23178899309994 19 23.907274918141276 26.31873923549662 31.31799555516276 18.45599029119935 20 24.80033799732275 25.3053939457954 31.65663955646474 18.23762850041711 21 23.544919369962646 24.77059078396841 32.785093628276236 18.899396217792713 22 22.50312022400945 24.874921590225668 31.6857400912679 20.93621809449698 23 21.94676111047641 25.823383465291684 32.379195057651394 19.850660366580513 24 21.072451709279193 25.191578520787484 33.718250777630956 20.01771899230237 25 21.605314835452642 26.43363245808984 31.571277987708797 20.389774718748722 26 20.566749082255356 28.281193078815026 31.095107014522245 20.056950824407373 27 21.06792495942092 27.323893263549532 32.024168533052816 19.584013243976727 28 20.09445818037589 28.239374532505295 32.94137427814507 18.72479300897374 29 20.669570971893194 26.451955017039978 33.11252853469107 19.765945476375755 30 20.801062277300076 25.593597020105236 33.143569105147776 20.461771597446912 31 21.311291654182178 26.916054657271143 31.22724499848031 20.54540869006637 32 22.262771362487037 26.71256647316607 31.372963232013173 19.651698932333712 33 21.75017083091727 27.40515920148133 30.951113257125858 19.893556710475547 34 21.169022372922274 26.98395590514519 32.22744115764083 19.619580564291702 35 21.33478764154177 26.15060281218946 31.000476386532704 21.51413315973607 36 21.44299851910612 27.906335078646887 30.58854214943017 20.062124252816822 37 21.90558924271786 28.26631947213785 30.712057752705814 19.116033532438472 38 22.039020583778285 27.132907531433965 30.027871845555914 20.800200039231832 39 22.810508095337664 26.135082526961106 30.465242105671585 20.589167272029645 40 22.247251077258685 26.10447307553852 31.665477496664217 19.982798350538573 41 19.90476580536269 27.67611751442632 31.3477427685171 21.07137391169389 42 21.818072078791314 27.299319478604637 29.858657624663458 21.023950817940587 43 22.49859347415118 26.976411322048072 30.35961794231196 20.165377261488786 44 21.345996736428912 27.998594551948763 30.065163642007377 20.590245069614944 45 21.21407431198791 27.291990455024585 29.576921335865443 21.917013897122064 46 20.18693321319483 28.52693092826395 29.76661371087864 21.51952214766258 47 21.446231911862025 27.042803653302695 31.00823652914688 20.5027279056884 48 21.653815726791244 25.63692448303439 31.116447406711227 21.592812383463137 49 20.87844814392478 27.403650284861904 30.46157759388156 21.25632397733176 50 19.92438172141519 27.74100092906152 30.183936935907692 22.1506804136156 51 20.266474674990135 27.174510518226636 29.788600781618808 22.770414025164417 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 204.0 1 674.5 2 1145.0 3 5715.0 4 10285.0 5 7266.5 6 4248.0 7 3746.5 8 3245.0 9 3096.0 10 2947.0 11 2893.5 12 2840.0 13 2730.0 14 2620.0 15 2565.5 16 2511.0 17 2594.0 18 2677.0 19 2817.0 20 2957.0 21 2979.0 22 3001.0 23 3293.0 24 3585.0 25 4267.5 26 5856.0 27 6762.0 28 8107.0 29 9452.0 30 10537.0 31 11622.0 32 12893.5 33 14165.0 34 15521.5 35 16878.0 36 18154.5 37 19431.0 38 21020.5 39 22610.0 40 24460.5 41 26311.0 42 27798.0 43 29285.0 44 31147.5 45 33010.0 46 33629.0 47 34248.0 48 33100.5 49 31953.0 50 30309.5 51 28666.0 52 26294.0 53 23922.0 54 22170.5 55 20419.0 56 19530.5 57 18642.0 58 18534.0 59 18426.0 60 17603.5 61 16781.0 62 14614.5 63 12448.0 64 10025.5 65 7603.0 66 6062.5 67 4522.0 68 3839.0 69 3156.0 70 2719.0 71 2282.0 72 1930.0 73 1578.0 74 1298.0 75 830.5 76 643.0 77 516.0 78 389.0 79 329.5 80 270.0 81 181.0 82 92.0 83 78.5 84 65.0 85 44.0 86 23.0 87 18.0 88 13.0 89 9.0 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 463909.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.71657252859063 #Duplication Level Percentage of deduplicated Percentage of total 1 73.15348284987883 29.785590901761022 2 7.9466700268130905 6.4712233301502495 3 3.922145339708105 4.790889455756965 4 2.675398866918733 4.357322880312232 5 1.940802095897615 3.9511404650627977 6 1.554440261517322 3.7974887789658864 7 1.349515135153988 3.8463341615249695 8 1.0624358485661785 3.460699702809563 9 0.9523727682293373 3.4899619402678 >10 5.397767200897567 33.1248090754848 >50 0.03088274175780397 0.874251284394887 >100 0.012461457200516982 0.7037248542063134 >500 5.418024869789992E-4 0.16170229408565132 >1k 0.0010836049739579984 1.184860875216962 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3365 0.7253577749084411 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2006 0.4324123912232787 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 733 0.15800512600531572 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0379384750026406 0.0 2 0.0 0.0 0.0 0.14399375739638592 0.0 3 0.0 0.0 0.0 0.20133258893446776 0.0 4 0.0 0.0 0.0 0.26643156308672605 0.0 5 0.0 0.0 0.0 0.469273068640617 0.0 6 0.0 0.0 0.0 0.6512053010396436 0.0 7 0.0 0.0 0.0 0.8059770342890524 0.0 8 0.0 0.0 0.0 1.1472077497957573 0.0 9 0.0 0.0 0.0 1.3034883996645894 0.0 10 0.0 0.0 0.0 1.6779152807986049 0.0 11 0.0 0.0 0.0 2.065922411507429 0.0 12 0.0 0.0 0.0 2.412326555423585 0.0 13 0.0 0.0 0.0 2.5903787165155236 0.0 14 0.0 0.0 0.0 2.682207070783279 0.0 15 0.0 0.0 0.0 2.7936513411035353 0.0 16 0.0 0.0 0.0 3.0374491548989133 0.0 17 0.0 0.0 0.0 3.3456992642953685 0.0 18 0.0 0.0 0.0 3.702665824547487 0.0 19 0.0 0.0 0.0 3.903782853964894 0.0 20 0.0 0.0 0.0 4.122144644747138 0.0 21 0.0 0.0 0.0 4.381462743770869 0.0 22 0.0 0.0 0.0 4.66427683015419 0.0 23 0.0 0.0 0.0 4.974035856170068 0.0 24 0.0 0.0 0.0 5.19153540888407 0.0 25 0.0 0.0 0.0 5.402999295120379 0.0 26 0.0 0.0 0.0 5.603038526952484 0.0 27 0.0 0.0 0.0 5.79855100892632 0.0 28 0.0 0.0 0.0 6.0061348238555405 0.0 29 0.0 0.0 0.0 6.236783507110231 0.0 30 0.0 0.0 0.0 6.4842458326956365 0.0 31 0.0 0.0 0.0 6.750461836265302 0.0 32 0.0 0.0 0.0 7.002666471226038 0.0 33 0.0 0.0 0.0 7.255517784737955 0.0 34 0.0 0.0 0.0 7.4911243368850355 0.0 35 0.0 0.0 0.0 7.742897852811651 0.0 36 0.0 0.0 0.0 7.9966114043918095 0.0 37 0.0 0.0 0.0 8.23739138494834 0.0 38 0.0 0.0 0.0 8.487655984255532 0.0 39 0.0 0.0 0.0 8.750854154586351 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 30 2.162691E-6 45.000004 1 TATCACG 20 7.0289325E-4 45.0 1 AGGACCG 45 3.8380676E-10 45.0 7 TGTTGCG 20 7.0289325E-4 45.0 1 TACCTAC 20 7.0289325E-4 45.0 32 CGCACGT 20 7.0289325E-4 45.0 27 CACGTTG 20 7.0289325E-4 45.0 29 CGGTAAG 20 7.0289325E-4 45.0 2 CGTTTTA 860 0.0 44.215115 1 CGTTATT 340 0.0 43.01471 1 AGGCGAT 200 0.0 42.75 7 GCTACGA 65 0.0 41.53846 10 ATAGCGG 90 0.0 40.0 2 TCTACGG 45 1.924127E-8 40.0 2 GAACGTC 40 3.4522782E-7 39.375 33 CGTTTTT 1775 0.0 39.16901 1 CCGATAA 35 6.240236E-6 38.571426 11 CTACGAA 70 0.0 38.571426 11 TCGACAC 35 6.240236E-6 38.571426 34 ATCGAAG 35 6.240236E-6 38.571426 2 >>END_MODULE