SRR3551079_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551079_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	563144
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1666	0.2958390749080164	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGATCG	20	7.030216E-4	45.000004	10
ACTGCGC	20	7.030216E-4	45.000004	39
TACGATG	20	7.030216E-4	45.000004	15
CTACGAT	20	7.030216E-4	45.000004	14
CAACTCG	20	7.030216E-4	45.000004	24
GGCGAAC	20	7.030216E-4	45.000004	10
TCGACGG	40	6.8048394E-9	45.000004	2
TAGTCGG	20	7.030216E-4	45.000004	2
TCACGAC	25	3.8882623E-5	45.0	25
CTGCGTC	25	3.8882623E-5	45.0	12
GGACGTA	25	3.8882623E-5	45.0	8
GTTAACG	30	2.1635224E-6	44.999996	1
ATGGGCG	145	0.0	41.89655	5
TGGGCGA	225	0.0	41.0	6
ACGGGTC	55	6.002665E-11	40.909092	5
TTAACGG	55	6.002665E-11	40.909092	2
ACGGGAC	225	0.0	40.0	5
CGTTCGG	40	3.4540244E-7	39.375004	45
CGCCTTA	40	3.4540244E-7	39.375004	32
CACGGGC	70	0.0	38.57143	4