SRR3551076_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551076_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	826895
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3339	0.40379975692197917	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1008	0.12190181341040882	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	841	0.1017057788473748	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGTC	20	7.032136E-4	45.000004	38
CGTTACG	20	7.032136E-4	45.000004	41
CCGTAAC	20	7.032136E-4	45.000004	39
GTCAACG	20	7.032136E-4	45.000004	1
CTCGATG	20	7.032136E-4	45.000004	1
TCGCGTA	20	7.032136E-4	45.000004	30
ATAACGC	45	3.8380676E-10	45.0	11
CTTACGT	45	3.8380676E-10	45.0	22
TATAGCG	75	0.0	42.0	1
ACCGCTA	65	0.0	41.538464	22
TCGTTCA	45	1.9272193E-8	40.0	16
TCGATGG	85	0.0	39.705883	2
TCGACGG	40	3.4566438E-7	39.375004	2
AATACGG	115	0.0	39.130432	2
TCCGCAT	35	6.246164E-6	38.571426	24
CGCTAGA	70	0.0	38.571426	24
TTAACGG	95	0.0	37.894737	2
CGTTATT	250	0.0	37.8	1
TAACGGG	280	0.0	37.767857	3
TACGGGA	365	0.0	37.602737	4