##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551076_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 826895 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.952099117783998 33.0 31.0 34.0 30.0 34.0 2 32.084406121696226 33.0 31.0 34.0 30.0 34.0 3 31.945262699617242 33.0 31.0 34.0 30.0 34.0 4 35.71369520918617 37.0 35.0 37.0 35.0 37.0 5 31.20523041014881 37.0 35.0 37.0 0.0 37.0 6 33.434442099661986 37.0 35.0 37.0 17.0 37.0 7 29.543102812328048 35.0 32.0 37.0 0.0 37.0 8 32.5924041141862 35.0 33.0 37.0 17.0 37.0 9 36.46810538218274 39.0 35.0 39.0 32.0 39.0 10 36.86587414363371 38.0 37.0 39.0 33.0 39.0 11 37.01032537383828 39.0 37.0 39.0 34.0 39.0 12 37.00134478984635 39.0 37.0 39.0 33.0 39.0 13 36.83187587299476 39.0 37.0 39.0 33.0 39.0 14 38.108539778327355 40.0 37.0 41.0 33.0 41.0 15 38.18395322259779 40.0 37.0 41.0 33.0 41.0 16 38.21719444427648 40.0 37.0 41.0 33.0 41.0 17 38.1632226582577 40.0 37.0 41.0 33.0 41.0 18 38.06852986171158 40.0 37.0 41.0 33.0 41.0 19 37.968168872710564 40.0 37.0 41.0 33.0 41.0 20 37.8730987610277 40.0 36.0 41.0 33.0 41.0 21 37.75599441283355 40.0 36.0 41.0 33.0 41.0 22 37.72529281226758 40.0 36.0 41.0 33.0 41.0 23 37.65386899183088 40.0 36.0 41.0 33.0 41.0 24 37.57208714528447 40.0 35.0 41.0 33.0 41.0 25 37.4140561981872 39.0 35.0 41.0 32.0 41.0 26 37.232779252504855 39.0 35.0 41.0 32.0 41.0 27 37.19299669244584 39.0 35.0 41.0 32.0 41.0 28 37.066406254724 39.0 35.0 41.0 32.0 41.0 29 37.028100302940516 39.0 35.0 41.0 31.0 41.0 30 36.87707508208418 39.0 35.0 41.0 31.0 41.0 31 36.765230168280134 39.0 35.0 41.0 31.0 41.0 32 36.647938371860995 39.0 35.0 41.0 31.0 41.0 33 36.44858778925982 39.0 35.0 41.0 30.0 41.0 34 36.25044050332872 39.0 35.0 41.0 30.0 41.0 35 36.12054734881696 39.0 35.0 40.0 29.0 41.0 36 35.98647591290309 39.0 35.0 40.0 29.0 41.0 37 35.85044171267211 39.0 35.0 40.0 28.0 41.0 38 35.717780371147484 38.0 35.0 40.0 27.0 41.0 39 35.71286801830946 38.0 35.0 40.0 27.0 41.0 40 35.546168497814115 38.0 35.0 40.0 27.0 41.0 41 35.44812702942937 38.0 34.0 40.0 26.0 41.0 42 35.38055375833691 38.0 34.0 40.0 26.0 41.0 43 35.2173323094226 38.0 34.0 40.0 26.0 41.0 44 35.05873418027682 38.0 34.0 40.0 25.0 41.0 45 34.92859794774427 38.0 34.0 40.0 24.0 41.0 46 34.8301501399815 38.0 34.0 40.0 24.0 41.0 47 34.69691073231789 37.0 34.0 40.0 24.0 41.0 48 34.564886714758224 37.0 33.0 40.0 23.0 41.0 49 34.41729844780776 37.0 33.0 40.0 23.0 41.0 50 34.24297401725733 37.0 33.0 40.0 23.0 41.0 51 32.35408244093869 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 18.0 9 37.0 10 52.0 11 51.0 12 42.0 13 31.0 14 42.0 15 78.0 16 145.0 17 274.0 18 525.0 19 949.0 20 1525.0 21 2188.0 22 3195.0 23 4567.0 24 6233.0 25 7999.0 26 10026.0 27 11583.0 28 13171.0 29 14940.0 30 18164.0 31 22740.0 32 29687.0 33 41809.0 34 60559.0 35 72478.0 36 82780.0 37 125595.0 38 152401.0 39 142991.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.863725140435 19.960212602567438 24.38882808579082 12.787234171206743 2 32.89220517719904 24.376371848904636 25.025910182066646 17.705512791829676 3 32.35561951638358 24.58316956808301 26.632643806045508 16.428567109487904 4 29.032706691901634 26.025190622751378 26.0735643582317 18.868538327115292 5 22.252522992641147 39.62220112589869 21.30210002479154 16.82317585666862 6 26.28822280942562 35.254415615041815 24.476747350026304 13.98061422550626 7 69.02944146475672 20.039303660077763 7.079858990561075 3.8513958846044543 8 83.06350866796872 5.7981968690099706 7.7262530309168636 3.4120414321044388 9 77.04170420670097 8.207087961591254 9.500722582673738 5.250485249034037 10 42.31976248495879 26.997381771567124 16.500160237998777 14.182695505475301 11 32.97262651243507 26.29862316255389 22.85598534275815 17.872764982252885 12 29.97575266509049 22.795034436052944 27.382920443345288 19.84629245551128 13 25.36670314852551 24.342752102745816 28.668331529396113 21.622213219332565 14 22.19592572212917 26.674003349881183 28.86847785994594 22.261593068043705 15 22.175608753227436 25.376740698637672 31.348841146699403 21.09880940143549 16 25.11528065836654 23.702162910647665 30.337225403467187 20.84533102751861 17 24.151192110243745 24.250962939671904 28.276504272005514 23.321340678078837 18 24.852127537353592 25.158212348605325 28.10731713216309 21.88234298187799 19 27.074779748335644 26.020716052219445 25.800252752767882 21.10425144667703 20 29.06560083202825 25.34904673507519 26.06642923224835 19.51892320064821 21 27.009838008453315 25.955532443659713 26.168376879773124 20.866252668113848 22 25.371298653396142 24.88586821785112 25.833509695910607 23.90932343284214 23 25.34324188681755 25.64799642034357 26.458740226993754 22.55002146584512 24 24.956131068636285 24.50516691962099 28.442426184703017 22.096275827039708 25 25.18602724650651 25.342153477769248 26.4057709866428 23.066048289081444 26 22.938583496090796 26.96763192424673 26.82178511177356 23.27199946788891 27 23.325331511255964 26.37650487667721 27.301894436415747 22.99626917565108 28 22.158677945809323 27.39586041758627 28.41606249886624 22.029399137738164 29 23.98950289940077 25.868338785456434 27.348212288138157 22.793946027004637 30 23.99712176273892 25.207190755779152 28.09038632474498 22.705301156736947 31 25.054329751661335 26.280966749103573 25.973793528803533 22.690909970431555 32 26.095574407875244 26.155678774209544 26.2094945549314 21.539252262983812 33 25.44664074640674 26.49477865992659 26.262584729621054 21.79599586404562 34 23.1647307094613 26.975613590600982 27.888667847792043 21.970987852145676 35 23.93544525000151 25.677383464647868 27.678725835807448 22.70844544954317 36 23.97402330404707 28.981551466631196 25.910907672679116 21.13351755664262 37 24.440587982754764 28.304077301229295 26.80340309229104 20.4519316237249 38 24.379153338694756 28.127271298048722 26.018781102800236 21.474794260456285 39 24.817661250823868 26.66783569860744 26.308056040972556 22.20644700959614 40 24.802907261502366 26.054819535733074 27.63385919614945 21.50841400661511 41 22.366805942713402 26.41750161749678 27.9574794865128 23.25821295327702 42 23.588000894914106 26.639657997690154 26.565888051082666 23.206453056313077 43 23.780649296464485 25.65513154632692 27.364538423862765 23.19968073334583 44 23.349639313334826 26.385574952079764 27.007782124695396 23.25700360989001 45 23.5720375622056 26.06461521716784 26.748015165166073 23.615332055460488 46 22.637577927064502 27.58330864257251 26.537347547149277 23.24176588321371 47 23.988051687336363 26.59237267125814 27.60205346507114 21.817522176334357 48 23.379510094993925 25.917921864323766 27.559121774832356 23.143446265849956 49 22.965430919282376 26.028939587251106 27.74221636362537 23.263413129841155 50 21.556183070401925 26.11165867492245 28.343864698661864 23.988293556013762 51 22.631894013145562 25.558625944043683 27.368045519685086 24.441434523125668 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 673.0 1 1395.0 2 2117.0 3 5055.0 4 7993.0 5 6096.0 6 4199.0 7 3418.0 8 2637.0 9 2530.0 10 2423.0 11 2381.5 12 2340.0 13 2484.0 14 2628.0 15 2495.0 16 2362.0 17 2446.0 18 2530.0 19 2502.5 20 2475.0 21 2814.0 22 3153.0 23 3450.5 24 3748.0 25 4809.5 26 6693.5 27 7516.0 28 9091.0 29 10666.0 30 12636.0 31 14606.0 32 16566.0 33 18526.0 34 20796.5 35 23067.0 36 24737.5 37 26408.0 38 27825.5 39 29243.0 40 32403.5 41 35564.0 42 38025.0 43 40486.0 44 43930.0 45 47374.0 46 51424.0 47 55474.0 48 57210.5 49 58947.0 50 56022.0 51 53097.0 52 52544.5 53 51992.0 54 50527.5 55 49063.0 56 47543.0 57 46023.0 58 45354.5 59 44686.0 60 43364.0 61 42042.0 62 38516.0 63 34990.0 64 30378.5 65 25767.0 66 22568.5 67 19370.0 68 16974.5 69 14579.0 70 12598.5 71 10618.0 72 9162.5 73 7707.0 74 6559.0 75 4423.5 76 3436.0 77 2786.0 78 2136.0 79 1678.5 80 1221.0 81 975.0 82 729.0 83 597.0 84 465.0 85 356.0 86 247.0 87 199.5 88 152.0 89 117.0 90 82.0 91 56.5 92 31.0 93 23.5 94 16.0 95 10.5 96 5.0 97 3.0 98 1.0 99 2.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 826895.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.20196858162808 #Duplication Level Percentage of deduplicated Percentage of total 1 73.1197295768391 24.277189641073534 2 8.008195585984739 5.317757164827959 3 3.6754069860600986 3.6609224182759115 4 2.502316749143824 3.3232736834541976 5 1.8070874805195365 2.9999430876231545 6 1.3447876368242244 2.6789758120079865 7 1.061287433094468 2.466578240677546 8 0.8666422858639252 2.3019383957411503 9 0.6999885417271009 2.091689781293057 >10 6.763164010385153 45.88116644984682 >50 0.12403792122186158 2.5600666015404774 >100 0.025482107929356713 1.6328883634478153 >500 0.0011242106439421963 0.2667565263054021 >1k 7.494737626281307E-4 0.5408538338850666 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3339 0.40379975692197917 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1008 0.12190181341040882 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 841 0.1017057788473748 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.043657296270989666 0.0 2 0.0 0.0 0.0 0.16471256931049286 0.0 3 0.0 0.0 0.0 0.24501297020782567 0.0 4 0.0 0.0 0.0 0.35433761239335104 0.0 5 0.0 0.0 0.0 0.6727577261925638 0.0 6 0.0 0.0 0.0 0.9659025632033088 0.0 7 0.0 0.0 0.0 1.220348411829797 0.0 8 0.0 0.0 0.0 1.7194444276480085 0.0 9 0.0 0.0 0.0 1.969536640081268 0.0 10 0.0 0.0 0.0 2.4715350800282985 0.0 11 0.0 0.0 0.0 2.998204125070293 0.0 12 0.0 0.0 0.0 3.4237720629584167 0.0 13 0.0 0.0 0.0 3.622588115782536 0.0 14 0.0 0.0 0.0 3.7096608396471136 0.0 15 0.0 0.0 0.0 3.853088965346265 0.0 16 0.0 0.0 0.0 4.120232919536337 0.0 17 0.0 0.0 0.0 4.42801081152988 0.0 18 0.0 0.0 0.0 4.767715368940434 0.0 19 0.0 0.0 0.0 4.965322078377545 0.0 20 0.0 0.0 0.0 5.186631918200013 0.0 21 0.0 0.0 0.0 5.45135718561607 0.0 22 0.0 0.0 0.0 5.745469497336421 0.0 23 0.0 0.0 0.0 6.031842011379921 0.0 24 0.0 0.0 0.0 6.268752380894793 0.0 25 0.0 0.0 0.0 6.477364115153677 0.0 26 0.0 0.0 0.0 6.6767848396713 0.0 27 0.0 0.0 0.0 6.866288948415458 0.0 28 1.209343387008024E-4 0.0 0.0 7.084817298447808 0.0 29 2.418686774016048E-4 0.0 0.0 7.3208811275917745 0.0 30 2.418686774016048E-4 0.0 0.0 7.574722304524759 0.0 31 2.418686774016048E-4 0.0 0.0 7.809818658959118 0.0 32 2.418686774016048E-4 0.0 0.0 8.04527781640958 0.0 33 2.418686774016048E-4 0.0 0.0 8.296095634875044 0.0 34 2.418686774016048E-4 0.0 0.0 8.542438882808579 0.0 35 2.418686774016048E-4 0.0 0.0 8.799182483870382 0.0 36 2.418686774016048E-4 0.0 0.0 9.054112069851675 0.0 37 2.418686774016048E-4 0.0 0.0 9.304688019639737 0.0 38 2.418686774016048E-4 0.0 0.0 9.57945083716796 0.0 39 2.418686774016048E-4 0.0 0.0 9.848408806438544 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGTC 20 7.032136E-4 45.000004 38 CGTTACG 20 7.032136E-4 45.000004 41 CCGTAAC 20 7.032136E-4 45.000004 39 GTCAACG 20 7.032136E-4 45.000004 1 CTCGATG 20 7.032136E-4 45.000004 1 TCGCGTA 20 7.032136E-4 45.000004 30 ATAACGC 45 3.8380676E-10 45.0 11 CTTACGT 45 3.8380676E-10 45.0 22 TATAGCG 75 0.0 42.0 1 ACCGCTA 65 0.0 41.538464 22 TCGTTCA 45 1.9272193E-8 40.0 16 TCGATGG 85 0.0 39.705883 2 TCGACGG 40 3.4566438E-7 39.375004 2 AATACGG 115 0.0 39.130432 2 TCCGCAT 35 6.246164E-6 38.571426 24 CGCTAGA 70 0.0 38.571426 24 TTAACGG 95 0.0 37.894737 2 CGTTATT 250 0.0 37.8 1 TAACGGG 280 0.0 37.767857 3 TACGGGA 365 0.0 37.602737 4 >>END_MODULE