SRR3551075_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551075_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	323096
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	1545	0.4781860499665734	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1377	0.4261891202614703	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG	1246	0.38564389531284815	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC	1209	0.37419219055636715	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	449	0.1389679847475673	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	404	0.12504023571941467	No Hit
GAACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	375	0.11606457523460519	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	330	0.10213682620645256	No Hit
GAATATGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	329	0.10182732067249363	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATACC	20	7.0257485E-4	45.000004	4
ATATGCG	20	7.0257485E-4	45.000004	1
CTTTCGT	20	7.0257485E-4	45.000004	15
TGTAACG	20	7.0257485E-4	45.000004	1
TTCGAAG	20	7.0257485E-4	45.000004	1
GTCATCG	25	3.8845596E-5	45.0	13
CGTTATT	105	0.0	45.0	1
CGTTTTA	45	3.8380676E-10	45.0	1
ATTACGG	30	2.1606393E-6	44.999996	2
TAGCCGT	30	2.1606393E-6	44.999996	44
TACGAAT	30	2.1606393E-6	44.999996	12
TACGGCT	165	0.0	42.272728	7
TGGGCGA	110	0.0	40.909092	6
GGCGATT	105	0.0	40.714287	8
GCGATTA	45	1.9208528E-8	40.0	9
GGGCGAT	455	0.0	39.56044	7
AGGCGAT	80	0.0	39.375004	7
CGTTTTT	550	0.0	39.272728	1
AACATAC	115	0.0	39.130432	16
CAACGGG	70	0.0	38.57143	3