##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551075_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 323096 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.814268824126575 31.0 31.0 34.0 30.0 34.0 2 31.943060266917573 33.0 31.0 34.0 30.0 34.0 3 31.797388392304455 33.0 31.0 34.0 30.0 34.0 4 35.58015883824003 37.0 35.0 37.0 33.0 37.0 5 31.219510609849703 37.0 35.0 37.0 0.0 37.0 6 33.38211243717038 37.0 35.0 37.0 17.0 37.0 7 29.41113167603437 35.0 32.0 37.0 0.0 37.0 8 32.42365736499369 35.0 33.0 37.0 17.0 37.0 9 36.28966622923218 39.0 35.0 39.0 32.0 39.0 10 36.70525478495556 38.0 35.0 39.0 33.0 39.0 11 36.86257335281155 39.0 37.0 39.0 33.0 39.0 12 36.92426709089558 39.0 37.0 39.0 33.0 39.0 13 36.75592084086463 39.0 35.0 39.0 33.0 39.0 14 38.02050164656944 40.0 37.0 41.0 33.0 41.0 15 38.081771362071954 40.0 37.0 41.0 33.0 41.0 16 38.13382090771783 40.0 37.0 41.0 33.0 41.0 17 38.06627441998663 40.0 37.0 41.0 33.0 41.0 18 37.97225901899126 40.0 37.0 41.0 33.0 41.0 19 37.86004159754376 40.0 37.0 41.0 33.0 41.0 20 37.81336506796742 40.0 36.0 41.0 33.0 41.0 21 37.729814049075195 40.0 36.0 41.0 33.0 41.0 22 37.69770904003764 39.0 36.0 41.0 33.0 41.0 23 37.64726892316835 39.0 36.0 41.0 33.0 41.0 24 37.596482160101026 39.0 36.0 41.0 33.0 41.0 25 37.474865055587195 39.0 36.0 41.0 33.0 41.0 26 37.31621870899052 39.0 35.0 41.0 32.0 41.0 27 37.24552145492361 39.0 35.0 41.0 32.0 41.0 28 37.075216034862706 39.0 35.0 41.0 31.0 41.0 29 37.026896030901035 39.0 35.0 41.0 31.0 41.0 30 36.90788805803848 39.0 35.0 41.0 31.0 41.0 31 36.64141926857652 39.0 35.0 41.0 30.0 41.0 32 36.53320684873846 39.0 35.0 40.0 30.0 41.0 33 36.39660967638101 39.0 35.0 40.0 30.0 41.0 34 36.239102310149306 39.0 35.0 40.0 30.0 41.0 35 36.08518830316686 39.0 35.0 40.0 29.0 41.0 36 35.83807908485404 38.0 35.0 40.0 27.0 41.0 37 35.734404016143806 38.0 35.0 40.0 27.0 41.0 38 35.530108698343525 38.0 35.0 40.0 26.0 41.0 39 35.614693465719164 38.0 35.0 40.0 27.0 41.0 40 35.51552170252804 38.0 35.0 40.0 26.0 41.0 41 35.43262374031248 38.0 34.0 40.0 26.0 41.0 42 35.32512008814717 38.0 34.0 40.0 26.0 41.0 43 35.15212506499616 38.0 34.0 40.0 25.0 41.0 44 34.96962203184193 38.0 34.0 40.0 24.0 41.0 45 34.85217087181519 38.0 34.0 40.0 24.0 41.0 46 34.71722336395375 38.0 34.0 40.0 23.0 41.0 47 34.50857020823533 38.0 33.0 40.0 23.0 41.0 48 34.35478928863248 37.0 33.0 40.0 23.0 41.0 49 34.174938717904276 37.0 33.0 40.0 22.0 41.0 50 33.98725456211157 37.0 33.0 40.0 21.0 41.0 51 31.829425310124545 35.0 29.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 13.0 10 13.0 11 12.0 12 6.0 13 9.0 14 16.0 15 28.0 16 36.0 17 76.0 18 153.0 19 322.0 20 542.0 21 842.0 22 1165.0 23 1733.0 24 2535.0 25 3345.0 26 4107.0 27 4869.0 28 5457.0 29 6476.0 30 7696.0 31 9679.0 32 12308.0 33 16781.0 34 22970.0 35 28489.0 36 32859.0 37 48977.0 38 58164.0 39 53405.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.36821254364028 20.300467972367343 23.93251541337559 13.398804070616782 2 31.814073835640183 25.90808923663555 25.23924777775027 17.038589149974 3 30.68654517542774 26.155384158268753 26.99012058335603 16.16795008294748 4 27.611298190011635 25.29960135687226 28.94186248050115 18.14723797261495 5 22.81303389704608 38.51208309604576 21.90370663827469 16.771176368633473 6 24.766632827394954 36.24216950999084 24.963787852526803 14.027409810087404 7 67.09120509074702 19.792878896674672 9.175910565280908 3.9400054472973975 8 79.88554485354197 6.676962884096367 9.217074801297446 4.220417461064204 9 73.80221358357888 8.059214598757025 10.661537128283854 7.477034689380247 10 39.32484462822195 27.935350484066657 18.346559536484513 14.39324535122688 11 29.016762819719215 25.670388986555082 26.885198207343947 18.427649986381756 12 26.83722484958031 23.32712258895189 30.040607126055413 19.795045435412383 13 23.430806942828138 24.391512120236712 32.40027731695842 19.777403619976724 14 20.195545596355263 27.763884418253397 30.25726099982668 21.783308985564663 15 19.233602396810856 26.125362121474733 35.0836902963825 19.557345185331915 16 21.582130388491347 26.012083096045757 31.07033203753683 21.335454477926067 17 21.262101666377795 25.307029489687277 29.79485973209201 23.63600911184292 18 21.84490058682249 26.382561220194617 29.9570406318865 21.815497561096393 19 22.79786812588209 27.661128580979028 27.64596280981504 21.89504048332384 20 24.161240002971255 27.037165424517788 29.23805927649986 19.563535296011093 21 23.629509495629783 27.95453982717211 28.443249065293287 19.97270161190482 22 22.72203927006215 24.852056354767623 27.74345705301211 24.682447322158122 23 21.176059127937208 27.840332285141255 28.73975536682596 22.243853220095573 24 22.480624953574168 25.11699309183648 29.451927600465496 22.95045435412385 25 21.246935895213806 28.601406393146313 27.369574367989703 22.782083343650182 26 21.615556986158914 27.23432044964964 27.994466041052814 23.155656523138635 27 23.0714710179018 27.54908757768589 27.227511327902544 22.151930076509768 28 20.141691633446406 27.079567682670163 30.72306682843489 22.055673855448536 29 23.238294500705674 25.918921930324114 28.41539356723698 22.42739000173323 30 23.557394706217348 26.258759006611037 29.451927600465496 20.73191868670612 31 23.632295045435413 26.340158962042242 28.234951840938916 21.79259415158343 32 24.30546958179612 28.33151756753411 26.447247876792034 20.91576497387773 33 23.216319607794585 26.97866887859955 27.63327308292272 22.171738430683142 34 22.69820734394731 25.609416396365166 30.00006190110679 21.69231435858073 35 22.96623913635576 25.62612969519895 27.75676579097234 23.65086537747295 36 23.31226632332186 28.50979275509446 28.166860623467947 20.01108029811573 37 21.780213930225074 27.884591576497385 30.27583133186421 20.059363161413327 38 21.200819570653923 27.594894396711812 28.91957808205611 22.284707950578156 39 21.660125783049 27.7570752965063 29.333077475425263 21.249721445019436 40 22.302968777081734 25.19994057493748 31.339292346547154 21.15779830143363 41 20.464505905365588 26.776252259390397 29.394669076683087 23.36457275856092 42 21.942704335553522 26.25783049000916 28.88181840691312 22.917646767524204 43 23.3360982494367 26.40144105776611 27.87406838834278 22.388392304454406 44 21.300789858122663 26.344492039517664 29.032857107485082 23.321860994874587 45 21.003974051056034 25.92975462401268 28.61100106469904 24.455270260232254 46 23.12811053061629 26.936576125981134 27.920494218436627 22.014819124965953 47 21.112300987941666 25.862591923143587 31.29998514373437 21.72512194518038 48 21.44316240374378 26.169621412830864 28.92855374254092 23.458662440884442 49 20.847673756406763 25.159395349988856 30.945601307351378 23.047329586253003 50 20.696944561368756 25.33457548220962 29.946826949265855 24.02165300715577 51 20.40817589818506 25.169299527075545 28.423440711119913 25.999083863619482 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 303.0 1 505.5 2 708.0 3 1888.5 4 3069.0 5 2286.5 6 1504.0 7 1250.0 8 996.0 9 1007.5 10 1019.0 11 1027.0 12 1035.0 13 963.0 14 891.0 15 939.0 16 987.0 17 974.0 18 961.0 19 1074.5 20 1188.0 21 1414.0 22 1640.0 23 1687.0 24 1734.0 25 2097.0 26 3052.5 27 3645.0 28 4507.0 29 5369.0 30 5994.0 31 6619.0 32 7269.5 33 7920.0 34 9066.5 35 10213.0 36 10732.0 37 11251.0 38 11994.0 39 12737.0 40 14431.0 41 16125.0 42 19105.5 43 22086.0 44 26941.5 45 31797.0 46 30144.0 47 28491.0 48 27072.5 49 25654.0 50 23006.5 51 20359.0 52 18104.0 53 15849.0 54 15037.5 55 14226.0 56 13784.5 57 13343.0 58 13173.5 59 13004.0 60 12587.0 61 12170.0 62 10982.5 63 9795.0 64 8471.0 65 7147.0 66 6036.5 67 4926.0 68 4191.0 69 3456.0 70 3069.0 71 2682.0 72 2313.5 73 1945.0 74 1698.5 75 1205.5 76 959.0 77 777.5 78 596.0 79 479.0 80 362.0 81 288.5 82 215.0 83 153.5 84 92.0 85 74.0 86 56.0 87 40.5 88 25.0 89 19.0 90 13.0 91 16.5 92 20.0 93 10.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 323096.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.18311651236081 #Duplication Level Percentage of deduplicated Percentage of total 1 73.19164304586553 33.070265354724654 2 9.719169054835012 8.782846956158842 3 4.585767725907715 6.215978323749364 4 2.8118291358080376 5.081888138242614 5 1.8396535953923943 4.156064137149902 6 1.2801064917628409 3.470352045932993 7 1.0310744287027929 3.261100923149591 8 0.8510286497063477 3.07617013080312 9 0.7691038799758572 3.1275459197152125 >10 3.8692276973736317 25.25634880749231 >50 0.029467208944004154 0.9276593776030271 >100 0.019187950010049217 1.9088852012425443 >500 0.0 0.0 >1k 0.0027411357157213164 1.6648946840358736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 1545 0.4781860499665734 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1377 0.4261891202614703 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 1246 0.38564389531284815 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 1209 0.37419219055636715 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 449 0.1389679847475673 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 404 0.12504023571941467 No Hit GAACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 375 0.11606457523460519 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 330 0.10213682620645256 No Hit GAATATGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 329 0.10182732067249363 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1259687523212915 0.0 2 0.0 0.0 0.0 0.5902270532597123 0.0 3 0.0 0.0 0.0 0.808737960234729 0.0 4 0.0 0.0 0.0 1.1708594349666972 0.0 5 0.0 0.0 0.0 2.4695446554584395 0.0 6 0.0 0.0 0.0 3.0956743506573896 0.0 7 0.0 0.0 0.0 3.7180899794488327 0.0 8 0.0 0.0 0.0 4.767004234035705 0.0 9 0.0 0.0 0.0 5.215787258276178 0.0 10 0.0 0.0 0.0 6.685319533513259 0.0 11 0.0 0.0 0.0 7.691212518879838 0.0 12 0.0 0.0 0.0 9.089249015772403 0.0 13 0.0 0.0 0.0 9.50708148661698 0.0 14 0.0 0.0 0.0 9.705165028350708 0.0 15 0.0 0.0 0.0 10.007551935028598 0.0 16 0.0 0.0 0.0 10.525664198875877 0.0 17 0.0 0.0 0.0 11.109391635922451 0.0 18 0.0 0.0 0.0 11.750996607819348 0.0 19 0.0 0.0 0.0 12.136021492064279 0.0 20 0.0 0.0 0.0 12.504642583009383 0.0 21 0.0 0.0 0.0 12.957449179191324 0.0 22 0.0 0.0 0.0 13.415826874984525 0.0 23 0.0 0.0 0.0 13.914130784658429 0.0 24 0.0 0.0 0.0 14.296370119097729 0.0 25 0.0 0.0 0.0 14.630017084705475 0.0 26 0.0 0.0 0.0 14.930237452645652 0.0 27 0.0 0.0 0.0 15.252432713496917 0.0 28 0.0 0.0 0.0 15.575865996484017 0.0 29 0.0 0.0 0.0 15.932106866070765 0.0 30 0.0 0.0 0.0 16.329511971674055 0.0 31 0.0 0.0 0.0 16.701537623492708 0.0 32 0.0 0.0 0.0 17.064897120360513 0.0 33 0.0 0.0 0.0 17.39730606383242 0.0 34 3.0950553395894717E-4 0.0 0.0 17.73838116225518 0.0 35 3.0950553395894717E-4 0.0 0.0 18.09493153737589 0.0 36 3.0950553395894717E-4 0.0 0.0 18.45055339589472 0.0 37 3.0950553395894717E-4 0.0 0.0 18.800294649268327 0.0 38 3.0950553395894717E-4 0.0 0.0 19.154368980117365 0.0 39 3.0950553395894717E-4 0.0 0.0 19.494206056404288 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACC 20 7.0257485E-4 45.000004 4 ATATGCG 20 7.0257485E-4 45.000004 1 CTTTCGT 20 7.0257485E-4 45.000004 15 TGTAACG 20 7.0257485E-4 45.000004 1 TTCGAAG 20 7.0257485E-4 45.000004 1 GTCATCG 25 3.8845596E-5 45.0 13 CGTTATT 105 0.0 45.0 1 CGTTTTA 45 3.8380676E-10 45.0 1 ATTACGG 30 2.1606393E-6 44.999996 2 TAGCCGT 30 2.1606393E-6 44.999996 44 TACGAAT 30 2.1606393E-6 44.999996 12 TACGGCT 165 0.0 42.272728 7 TGGGCGA 110 0.0 40.909092 6 GGCGATT 105 0.0 40.714287 8 GCGATTA 45 1.9208528E-8 40.0 9 GGGCGAT 455 0.0 39.56044 7 AGGCGAT 80 0.0 39.375004 7 CGTTTTT 550 0.0 39.272728 1 AACATAC 115 0.0 39.130432 16 CAACGGG 70 0.0 38.57143 3 >>END_MODULE