##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551073_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 407885 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.940257670666977 31.0 31.0 34.0 30.0 34.0 2 32.08440614388859 33.0 31.0 34.0 30.0 34.0 3 32.02663495838288 33.0 31.0 34.0 30.0 34.0 4 35.744202409993015 37.0 35.0 37.0 35.0 37.0 5 31.12760704610368 37.0 35.0 37.0 0.0 37.0 6 33.389646591563796 37.0 35.0 37.0 17.0 37.0 7 29.618397342388175 35.0 32.0 37.0 0.0 37.0 8 32.665810216114835 35.0 35.0 37.0 17.0 37.0 9 36.51620922563958 39.0 35.0 39.0 32.0 39.0 10 36.824043541684546 38.0 37.0 39.0 33.0 39.0 11 36.93146107358692 39.0 37.0 39.0 33.0 39.0 12 36.89059416257033 39.0 35.0 39.0 33.0 39.0 13 36.64741532539809 39.0 35.0 39.0 33.0 39.0 14 37.850864827095876 40.0 37.0 41.0 33.0 41.0 15 38.0056486509678 40.0 37.0 41.0 33.0 41.0 16 38.05816345293404 40.0 37.0 41.0 33.0 41.0 17 38.00280226044106 40.0 36.0 41.0 33.0 41.0 18 37.93811000649693 40.0 36.0 41.0 33.0 41.0 19 37.85965652083308 40.0 36.0 41.0 33.0 41.0 20 37.783311472596445 40.0 36.0 41.0 33.0 41.0 21 37.68216041286147 40.0 36.0 41.0 33.0 41.0 22 37.669637275212374 39.0 36.0 41.0 33.0 41.0 23 37.598291185015384 39.0 35.0 41.0 33.0 41.0 24 37.537313213283156 39.0 35.0 41.0 33.0 41.0 25 37.4074015960381 39.0 35.0 41.0 32.0 41.0 26 37.25236034666634 39.0 35.0 41.0 32.0 41.0 27 37.189592654792406 39.0 35.0 41.0 32.0 41.0 28 37.08836314157177 39.0 35.0 41.0 32.0 41.0 29 37.049131495396985 39.0 35.0 41.0 32.0 41.0 30 36.93874253772509 39.0 35.0 41.0 31.0 41.0 31 36.837025141890486 39.0 35.0 41.0 31.0 41.0 32 36.71159027667112 39.0 35.0 41.0 31.0 41.0 33 36.5588413400836 39.0 35.0 40.0 30.0 41.0 34 36.45021758583915 39.0 35.0 40.0 30.0 41.0 35 36.334814960099045 39.0 35.0 40.0 30.0 41.0 36 36.23666229451929 39.0 35.0 40.0 30.0 41.0 37 36.17061671794746 39.0 35.0 40.0 30.0 41.0 38 36.05382154283683 38.0 35.0 40.0 29.0 41.0 39 36.05112960760999 38.0 35.0 40.0 29.0 41.0 40 35.87896588499209 38.0 35.0 40.0 29.0 41.0 41 35.831893793593785 38.0 35.0 40.0 29.0 41.0 42 35.79559434644569 38.0 35.0 40.0 29.0 41.0 43 35.613113990463 38.0 35.0 40.0 28.0 41.0 44 35.38770241612219 38.0 34.0 40.0 27.0 41.0 45 35.26504774630104 38.0 34.0 40.0 26.0 41.0 46 35.17433590350221 38.0 34.0 40.0 26.0 41.0 47 35.05976194270444 38.0 34.0 40.0 26.0 41.0 48 35.00368241048335 38.0 34.0 40.0 26.0 41.0 49 34.88783848388639 37.0 34.0 40.0 26.0 41.0 50 34.698326734251076 37.0 34.0 40.0 24.0 41.0 51 32.717994042438434 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 16.0 9 21.0 10 34.0 11 21.0 12 15.0 13 13.0 14 15.0 15 36.0 16 52.0 17 102.0 18 238.0 19 400.0 20 588.0 21 896.0 22 1298.0 23 1910.0 24 2528.0 25 3333.0 26 4208.0 27 4911.0 28 5828.0 29 7188.0 30 9001.0 31 11223.0 32 14871.0 33 21871.0 34 31767.0 35 37417.0 36 40244.0 37 61823.0 38 75201.0 39 70808.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.1707834316045 20.347401841205244 24.864361278301484 10.61745344888878 2 32.81218971033502 24.25389509297964 25.477279135050317 17.45663606163502 3 34.11991124949434 24.33872292435368 25.373083099403015 16.168282726748963 4 29.316596589725048 26.138985253196367 24.951885948245216 19.592532208833372 5 21.308211873444723 40.98704291650833 20.864214178015864 16.840531032031087 6 25.36450224940853 36.835627689177095 23.814555573262073 13.985314488152298 7 70.27078710911164 19.773465560145628 5.887934099072043 4.067813231670692 8 84.56574769849344 4.785662625494931 7.043161675472254 3.605428000539368 9 78.8923348492835 7.395957193816885 8.57962415877024 5.132083798129375 10 42.68678671684421 26.813930397048185 16.18667026245143 14.312612623656177 11 33.984824153866896 26.194883361731865 22.288144942814764 17.532147541586475 12 31.16025350282555 25.163710359537617 25.491008495041495 18.18502764259534 13 25.105115412432426 26.925971781261875 27.382718168111108 20.586194638194588 14 20.842884636601003 29.71450286232639 28.19569241330277 21.246920087769837 15 20.674945143851822 27.027961312624882 32.567758069063586 19.729335474459713 16 24.117336994495997 24.703531632690588 31.6093997082511 19.569731664562315 17 22.715716439682755 24.980080169655665 27.651421356509804 24.652782034151784 18 25.186020569523272 25.716807433467764 28.335437684641505 20.761734312367455 19 25.97864594187087 28.489157483114113 25.125954619561885 20.40624195545313 20 28.104490236218542 26.582492614339827 26.08014513894848 19.232872010493153 21 25.884746926216952 27.040955171187957 26.662171935717176 20.41212596687792 22 24.175686774458487 25.068095173884796 27.289064319599888 23.46715373205683 23 23.474263579195117 27.50383073660468 26.947791656962135 22.07411402723807 24 23.628964046238522 25.55499711928607 29.374210868259436 21.441827966215968 25 22.70125157826348 27.073317234024298 27.750223715017714 22.475207472694507 26 21.416820917660615 29.447515843926595 27.125783002562 22.00988023585079 27 22.325655515647792 29.06088725988943 26.9656888583792 21.64776836608358 28 19.681037547347906 29.49507826961031 28.52102921166505 22.302854971376735 29 22.219743310001594 27.596013582259705 28.086102700516076 22.098140407222626 30 23.400468269242555 27.08704659401547 28.18539539330939 21.327089743432584 31 25.830074653394952 27.311374529585546 25.854836534807607 21.003714282211895 32 25.157336013827425 27.84804540495483 25.690084214913515 21.304534366304228 33 23.6939333390539 28.789487232921047 25.189943243806468 22.32663618421859 34 22.145702832906334 27.824019024970276 28.030204591980585 22.000073550142808 35 21.72107334175074 28.59506968876031 26.956127339813918 22.727729629675032 36 23.5880211334077 29.419321622516147 25.89577944763843 21.09687779643772 37 23.543155546293686 28.593598685904116 26.53419468722802 21.32905108057418 38 22.583816516910403 29.089571815585273 25.370631427976022 22.955980239528298 39 23.508341812030352 27.05443936403643 26.155901786042634 23.28131703789058 40 23.407578116380844 26.318202434509725 28.222415631857018 22.05180381725241 41 20.478811429692193 27.762727239295387 27.271412285325518 24.4870490456869 42 22.92288267526386 26.561163072924966 25.842333010529927 24.673621241281243 43 23.56129791485345 26.227245424568203 26.190960687448666 24.020495973129684 44 22.509530872672446 27.304755016732656 26.32237027593562 23.86334383465928 45 22.283486767103472 27.56880002942006 25.961484241881905 24.186228961594566 46 22.5847971854812 28.408007158880565 26.702379347119898 22.304816308518333 47 21.64261985608689 27.938757247753653 27.596503916545107 22.822118979614352 48 22.346739889919952 26.65824926143398 28.123122939063705 22.87188790958236 49 22.670850852568737 25.601333709256284 28.107677409073634 23.62013802910134 50 20.320923789793692 27.18830062395038 27.855400419235814 24.635375167020115 51 21.026269659340254 26.826433921325865 26.622700025742553 25.52459639359133 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 251.0 1 605.0 2 959.0 3 1274.0 4 1589.0 5 1268.5 6 948.0 7 798.0 8 648.0 9 720.5 10 793.0 11 827.5 12 862.0 13 939.0 14 1016.0 15 1106.0 16 1196.0 17 1107.5 18 1019.0 19 1183.5 20 1348.0 21 1393.5 22 1439.0 23 1540.0 24 1641.0 25 2072.5 26 2923.0 27 3342.0 28 4183.0 29 5024.0 30 6335.0 31 7646.0 32 8781.0 33 9916.0 34 11012.5 35 12109.0 36 12881.0 37 13653.0 38 15013.0 39 16373.0 40 17977.5 41 19582.0 42 22305.0 43 25028.0 44 27227.5 45 29427.0 46 31141.5 47 32856.0 48 33447.5 49 34039.0 50 33523.5 51 33008.0 52 30425.5 53 27843.0 54 25271.0 55 22699.0 56 21439.0 57 20179.0 58 19366.0 59 18553.0 60 18032.5 61 17512.0 62 15813.0 63 14114.0 64 11864.0 65 9614.0 66 7812.5 67 6011.0 68 5135.0 69 4259.0 70 3623.5 71 2988.0 72 2610.5 73 2233.0 74 1911.5 75 1238.5 76 887.0 77 704.0 78 521.0 79 428.5 80 336.0 81 227.5 82 119.0 83 102.0 84 85.0 85 74.5 86 64.0 87 49.0 88 34.0 89 24.5 90 15.0 91 12.5 92 10.0 93 6.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 407885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.894176620808295 #Duplication Level Percentage of deduplicated Percentage of total 1 72.11718167770711 24.443524931791245 2 8.630210317713836 5.850277455666296 3 4.074682340410815 4.14324008758718 4 2.5850794987370698 3.5047656443609925 5 1.9181445823415546 3.2506965629065605 6 1.478087151137412 3.0059128176959287 7 1.147844337846086 2.7233667104104997 8 0.8786967284553474 2.382616168831358 9 0.7222141106424319 2.203096736173911 >10 6.3111025325596595 44.942975509264386 >50 0.1186672088973054 2.5297709442644676 >100 0.018089513551418506 1.0197564310471796 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 443 0.1086090442158942 No Hit GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 431 0.10566703850349976 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06889196709856946 0.0 2 0.0 0.0 0.0 0.3226399597925886 0.0 3 0.0 0.0 0.0 0.4334555082927786 0.0 4 0.0 0.0 0.0 0.584723635338392 0.0 5 0.0 0.0 0.0 1.042695857901124 0.0 6 0.0 0.0 0.0 1.3528322934160364 0.0 7 0.0 0.0 0.0 1.650710371795972 0.0 8 0.0 0.0 0.0 2.2628927271167116 0.0 9 0.0 0.0 0.0 2.522769898378219 0.0 10 0.0 0.0 0.0 3.0927835051546393 0.0 11 0.0 0.0 0.0 3.8273042646824473 0.0 12 0.0 0.0 0.0 4.359316964340439 0.0 13 0.0 0.0 0.0 4.5949225884746925 0.0 14 0.0 0.0 0.0 4.690782941270211 0.0 15 0.0 0.0 0.0 4.903588021133408 0.0 16 0.0 0.0 0.0 5.330424016573299 0.0 17 0.0 0.0 0.0 5.8161001262610785 0.0 18 0.0 0.0 0.0 6.392978413033085 0.0 19 0.0 0.0 0.0 6.705321352832294 0.0 20 0.0 0.0 0.0 7.012025448349412 0.0 21 0.0 0.0 0.0 7.370704978118832 0.0 22 0.0 0.0 0.0 7.7921472964193335 0.0 23 0.0 0.0 0.0 8.183188889025093 0.0 24 0.0 0.0 0.0 8.500435171678292 0.0 25 0.0 0.0 0.0 8.792429238633439 0.0 26 0.0 0.0 0.0 9.078048959878396 0.0 27 0.0 0.0 0.0 9.369062358262745 0.0 28 0.0 0.0 0.0 9.669146940926977 0.0 29 0.0 0.0 0.0 9.964573347879917 0.0 30 0.0 0.0 0.0 10.306581511945769 0.0 31 0.0 0.0 0.0 10.635350650305845 0.0 32 0.0 0.0 0.0 10.969268298662612 0.0 33 0.0 0.0 0.0 11.284308077031517 0.0 34 0.0 0.0 0.0 11.592483175404832 0.0 35 0.0 0.0 0.0 11.9266459909043 0.0 36 0.0 0.0 0.0 12.260073304975666 0.0 37 0.0 0.0 0.0 12.58565527048065 0.0 38 0.0 0.0 0.0 12.904617723132747 0.0 39 4.903342853990708E-4 0.0 0.0 13.270652267183152 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGGTT 25 3.8863654E-5 45.0 23 CTATGCG 20 7.027929E-4 45.0 1 TGGACGC 20 7.027929E-4 45.0 37 TAGCGAC 20 7.027929E-4 45.0 21 ATAGCGA 20 7.027929E-4 45.0 20 ACCGACA 25 3.8863654E-5 45.0 19 TTCGTTA 20 7.027929E-4 45.0 38 ACGATAT 25 3.8863654E-5 45.0 32 GGTATAC 25 3.8863654E-5 45.0 8 GCGATCA 20 7.027929E-4 45.0 9 TTAACGG 25 3.8863654E-5 45.0 2 CGGCTTA 20 7.027929E-4 45.0 23 ACACTCG 20 7.027929E-4 45.0 34 CCACGTT 25 3.8863654E-5 45.0 39 CGATCAT 20 7.027929E-4 45.0 10 ATACCCG 20 7.027929E-4 45.0 30 CGCAGTA 75 0.0 42.000004 37 TTACGGG 125 0.0 41.399998 3 CGTATGG 55 6.002665E-11 40.909092 2 CGATTTG 55 6.002665E-11 40.909092 10 >>END_MODULE