##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551070_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 602943 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.922398966403126 31.0 31.0 34.0 30.0 34.0 2 32.055461295678036 33.0 31.0 34.0 30.0 34.0 3 31.989556226707997 33.0 31.0 34.0 30.0 34.0 4 35.72239166886422 37.0 35.0 37.0 35.0 37.0 5 31.2026941186812 37.0 35.0 37.0 0.0 37.0 6 33.41561142595569 37.0 35.0 37.0 17.0 37.0 7 29.53328921639359 35.0 32.0 37.0 0.0 37.0 8 32.550710431997715 35.0 33.0 37.0 17.0 37.0 9 36.41558820651372 39.0 35.0 39.0 32.0 39.0 10 36.75225021270668 38.0 35.0 39.0 33.0 39.0 11 36.917587566320535 39.0 37.0 39.0 33.0 39.0 12 36.95585984081414 39.0 37.0 39.0 33.0 39.0 13 36.78593167181641 39.0 37.0 39.0 33.0 39.0 14 38.061226351412984 40.0 37.0 41.0 33.0 41.0 15 38.14272161713462 40.0 37.0 41.0 33.0 41.0 16 38.20187314555439 40.0 37.0 41.0 33.0 41.0 17 38.15422850916256 40.0 37.0 41.0 33.0 41.0 18 38.05071457832664 40.0 37.0 41.0 33.0 41.0 19 37.965316787822395 40.0 37.0 41.0 33.0 41.0 20 37.92329954904527 40.0 37.0 41.0 33.0 41.0 21 37.83162089948801 40.0 36.0 41.0 33.0 41.0 22 37.81469392629154 40.0 36.0 41.0 33.0 41.0 23 37.75664034577066 40.0 36.0 41.0 33.0 41.0 24 37.70181095062054 40.0 36.0 41.0 33.0 41.0 25 37.56243459166124 39.0 36.0 41.0 33.0 41.0 26 37.386769561965224 39.0 36.0 41.0 32.0 41.0 27 37.35504517010729 39.0 36.0 41.0 32.0 41.0 28 37.22170752459188 39.0 36.0 41.0 32.0 41.0 29 37.19123864113192 39.0 36.0 41.0 32.0 41.0 30 37.077808350043036 39.0 35.0 41.0 31.0 41.0 31 36.95238355864485 39.0 35.0 41.0 31.0 41.0 32 36.845885929515724 39.0 35.0 41.0 31.0 41.0 33 36.685472756131176 39.0 35.0 41.0 30.0 41.0 34 36.57091632210673 39.0 35.0 41.0 30.0 41.0 35 36.45422701648415 39.0 35.0 41.0 30.0 41.0 36 36.314321585954225 39.0 35.0 40.0 30.0 41.0 37 36.23284953967456 39.0 35.0 40.0 30.0 41.0 38 36.0656148259454 39.0 35.0 40.0 29.0 41.0 39 36.03244585309059 39.0 35.0 40.0 29.0 41.0 40 35.87908309740722 39.0 35.0 40.0 28.0 41.0 41 35.79075136455685 38.0 35.0 40.0 28.0 41.0 42 35.75861233980658 38.0 35.0 40.0 28.0 41.0 43 35.56303166302619 38.0 35.0 40.0 27.0 41.0 44 35.37845202614509 38.0 34.0 40.0 26.0 41.0 45 35.23544182451741 38.0 34.0 40.0 26.0 41.0 46 35.1038771492496 38.0 34.0 40.0 25.0 41.0 47 34.9860965298544 38.0 34.0 40.0 24.0 41.0 48 34.88873243407752 38.0 34.0 40.0 24.0 41.0 49 34.746181645694534 38.0 34.0 40.0 24.0 41.0 50 34.5569332424458 37.0 33.0 40.0 24.0 41.0 51 32.526723089910654 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 23.0 10 38.0 11 22.0 12 22.0 13 20.0 14 26.0 15 61.0 16 96.0 17 187.0 18 303.0 19 533.0 20 866.0 21 1405.0 22 2043.0 23 2905.0 24 4038.0 25 5223.0 26 6381.0 27 7619.0 28 8899.0 29 10779.0 30 13114.0 31 16719.0 32 21091.0 33 29927.0 34 42707.0 35 51264.0 36 60367.0 37 93744.0 38 114475.0 39 108024.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.49060690645716 20.492152657879767 24.149214768228504 10.868025667434566 2 33.30862121295048 25.415835327717545 24.614930432893324 16.66061302643865 3 33.06912925434079 24.80997374544526 25.443366951768244 16.677530048445707 4 28.42208965026545 26.035960281485977 26.035960281485977 19.505989786762594 5 22.175064641267912 39.88702082949798 20.962843917252545 16.975070611981565 6 25.74356116581501 36.826532524633336 24.09862955536427 13.331276754187376 7 69.95885183176519 19.74780368956933 6.500282779632569 3.7930616990329105 8 83.49445967529269 6.012176938781941 6.777091698551936 3.716271687373433 9 77.42572680999696 7.964102742713656 8.649905546627128 5.960264900662252 10 39.6272947857426 27.92701797682368 17.259177069805936 15.186510167627787 11 31.127983905609653 26.74149961107435 23.4866314062855 18.643885077030497 12 28.71266438121016 24.21522432468741 27.63213106379873 19.439980230303693 13 24.14523429246214 26.26135472175645 29.940143595663272 19.65326739011814 14 21.151087250370267 28.606352507616805 28.653123097871607 21.58943714414132 15 20.83596625219963 26.812153055927347 32.94672962452504 19.405151067347994 16 23.262729644427417 24.987270770205473 31.245407940717445 20.50459164464966 17 23.871410730367547 24.792393310810475 27.879418120784223 23.45677783803776 18 24.02217125001866 26.060672401868835 28.350275233313926 21.56688111479858 19 25.144831269290798 27.47059008894705 25.998477468019367 21.38610117374279 20 26.195511018454482 26.811323790142684 27.23607372504532 19.757091466357515 21 25.58666407935742 26.87186019242283 26.791753117624715 20.749722610595033 22 24.52520387499316 25.26822601804814 26.67698273302783 23.52958737393087 23 23.503216721978696 27.83181826474476 27.007859781107 21.657105232169542 24 23.246973594518884 25.64239074008654 29.005561056351926 22.105074609042646 25 22.886242978191966 28.02470548625658 27.05861084712817 22.030440688423283 26 22.53048795657301 27.948081327754032 27.226620095100202 22.294810620572758 27 23.066193653463095 28.043612746146817 27.140708159809467 21.749485440580617 28 21.547476295437544 27.622511580696685 29.086994956405498 21.743017167460273 29 23.789810977157046 26.520749059197968 27.471585207888637 22.217854755756345 30 22.48288810053355 26.542641675912982 28.311797300905724 22.662672922647747 31 24.15037574032703 26.926591734210366 26.287061961080898 22.635970564381708 32 25.089933874346332 27.437419457560665 26.45158829275736 21.021058375335645 33 23.286612499025612 26.994923234866313 27.699467445513093 22.01899682059498 34 23.321607515138247 26.426212759746775 27.83248167737249 22.41969804774249 35 22.775784775675312 25.780380566653893 28.28111446687332 23.162720190797472 36 23.358924475447928 27.498619272468545 27.656179771553862 21.486276480529668 37 22.56962930160894 28.406997012984643 27.74773071418028 21.275642971226137 38 22.067923501889897 27.226951801414064 28.44132861646955 22.263796080226488 39 22.80746272864931 26.000965265373345 28.234675582932383 22.956896423044963 40 23.340348921871552 25.588156757769802 29.487530330396073 21.58396398996257 41 21.19636516221268 26.217735341483355 28.990634272228057 23.595265224075906 42 22.428488265059883 25.85534619358712 28.505016228731407 23.21114931262159 43 22.94677938047212 26.354398342795253 27.961515433465518 22.737306843267106 44 22.461658896446266 26.57299280363152 27.921710675801858 23.043637624120354 45 22.21702548997169 26.12120880414898 27.451516975899874 24.21024872997945 46 22.147367164060284 27.402590294604963 27.424648764476906 23.025393776857843 47 22.178713410720416 25.80409756809516 29.290165073647096 22.72702394753733 48 21.843358327404083 25.7253173185525 29.490183980906988 22.94114037313643 49 21.684305149906375 25.818195086434372 29.513071716563587 22.984428047095662 50 20.87941977931579 26.264340078581228 29.317862550854723 23.53837759124826 51 21.272160054930566 25.635259054338473 27.936969166239596 25.155611724491372 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 266.0 1 650.5 2 1035.0 3 1645.0 4 2255.0 5 1781.0 6 1307.0 7 1150.5 8 994.0 9 1016.5 10 1039.0 11 1087.0 12 1135.0 13 1262.0 14 1389.0 15 1433.0 16 1477.0 17 1490.5 18 1504.0 19 1582.5 20 1661.0 21 1771.0 22 1881.0 23 2253.0 24 2625.0 25 3482.5 26 5347.5 27 6355.0 28 7591.5 29 8828.0 30 10277.0 31 11726.0 32 13062.0 33 14398.0 34 16992.5 35 19587.0 36 21166.0 37 22745.0 38 24262.0 39 25779.0 40 28746.5 41 31714.0 42 34405.0 43 37096.0 44 40114.0 45 43132.0 46 46421.5 47 49711.0 48 48085.0 49 46459.0 50 46491.0 51 46523.0 52 42720.0 53 38917.0 54 36735.0 55 34553.0 56 31958.0 57 29363.0 58 27693.5 59 26024.0 60 25106.0 61 24188.0 62 22034.0 63 19880.0 64 17217.5 65 14555.0 66 12390.0 67 10225.0 68 8308.0 69 6391.0 70 5243.0 71 4095.0 72 3549.0 73 3003.0 74 2462.0 75 1630.5 76 1340.0 77 1025.5 78 711.0 79 522.0 80 333.0 81 279.5 82 226.0 83 168.0 84 110.0 85 94.5 86 79.0 87 54.0 88 29.0 89 24.0 90 19.0 91 15.0 92 11.0 93 9.0 94 7.0 95 4.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 602943.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.30898672656833 #Duplication Level Percentage of deduplicated Percentage of total 1 72.70494312314885 25.671378716911686 2 8.345614867478496 5.89350409161699 3 4.020155313397546 4.258428317984913 4 2.6208828713008265 3.7016287405860466 5 1.9003102604346944 3.3549014881025108 6 1.3906476273843655 2.946141516998898 7 1.1480850190796514 2.837640308975875 8 0.88616933300672 2.5031792973300946 9 0.7056772457546633 2.2425073653233434 >10 6.183803041001935 42.992855108286534 >50 0.07016574574875023 1.5942343303397686 >100 0.0211909970371502 1.2578621932129168 >500 0.0014127331358100132 0.39473428244381553 >1k 9.418220905400089E-4 0.3510042418866447 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCG 1100 0.18243847262510718 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTC 1011 0.16767754165816667 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGC 946 0.15689708645759218 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 843 0.13981421129360488 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.317063138638312E-4 0.0 0.0 0.058546164396966215 0.0 2 3.317063138638312E-4 0.0 0.0 0.31296490713052477 0.0 3 3.317063138638312E-4 0.0 0.0 0.4176182491545635 0.0 4 3.317063138638312E-4 0.0 0.0 0.5945835676009175 0.0 5 3.317063138638312E-4 0.0 0.0 1.224659710785265 0.0 6 3.317063138638312E-4 0.0 0.0 1.5439270378792025 0.0 7 3.317063138638312E-4 0.0 0.0 1.887077219571336 0.0 8 3.317063138638312E-4 0.0 0.0 2.4516413657675766 0.0 9 3.317063138638312E-4 0.0 0.0 2.6700699734469096 0.0 10 3.317063138638312E-4 0.0 0.0 3.478935819803862 0.0 11 3.317063138638312E-4 0.0 0.0 4.0969046825321795 0.0 12 3.317063138638312E-4 0.0 0.0 4.82251224410931 0.0 13 3.317063138638312E-4 0.0 0.0 5.04757497806592 0.0 14 3.317063138638312E-4 0.0 0.0 5.15322343903155 0.0 15 4.975594707957469E-4 0.0 0.0 5.337983855853704 0.0 16 4.975594707957469E-4 0.0 0.0 5.709992486851991 0.0 17 4.975594707957469E-4 0.0 0.0 6.1355716875392865 0.0 18 4.975594707957469E-4 0.0 0.0 6.615384870543318 0.0 19 4.975594707957469E-4 0.0 0.0 6.881579187419043 0.0 20 4.975594707957469E-4 0.0 0.0 7.155900308984432 0.0 21 4.975594707957469E-4 0.0 0.0 7.493743189654744 0.0 22 4.975594707957469E-4 0.0 0.0 7.878522513736788 0.0 23 4.975594707957469E-4 0.0 0.0 8.25102870420587 0.0 24 4.975594707957469E-4 0.0 0.0 8.557857044529914 0.0 25 4.975594707957469E-4 0.0 0.0 8.834831816606213 0.0 26 4.975594707957469E-4 0.0 0.0 9.090079825124432 0.0 27 4.975594707957469E-4 0.0 0.0 9.352459519390722 0.0 28 4.975594707957469E-4 0.0 0.0 9.622966018346677 0.0 29 4.975594707957469E-4 0.0 0.0 9.895462755185813 0.0 30 4.975594707957469E-4 0.0 0.0 10.225344684323394 0.0 31 4.975594707957469E-4 0.0 0.0 10.546933955614378 0.0 32 4.975594707957469E-4 0.0 0.0 10.849781820172057 0.0 33 4.975594707957469E-4 0.0 0.0 11.13836631323359 0.0 34 4.975594707957469E-4 0.0 0.0 11.410199637444999 0.0 35 4.975594707957469E-4 0.0 0.0 11.711388970433358 0.0 36 4.975594707957469E-4 0.0 0.0 12.01539780708956 0.0 37 4.975594707957469E-4 0.0 0.0 12.317084699548714 0.0 38 4.975594707957469E-4 0.0 0.0 12.626566690383669 0.0 39 4.975594707957469E-4 0.0 0.0 12.952136437441018 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAC 20 7.030614E-4 45.000004 32 TCTACGG 25 3.8885904E-5 45.000004 2 TTAACGG 20 7.030614E-4 45.000004 2 TCGATCA 30 2.1637788E-6 44.999996 17 GTATACG 30 2.1637788E-6 44.999996 1 GCTACGA 110 0.0 42.954544 10 CGTTTTA 75 0.0 42.0 1 TACGGGA 210 0.0 41.785713 4 ATAGGCG 50 1.0804797E-9 40.500004 5 ATCACGG 45 1.925764E-8 40.0 2 TTTGACG 45 1.925764E-8 40.0 1 ATTTGCG 45 1.925764E-8 40.0 1 TATCACG 40 3.45457E-7 39.375004 1 AGGCGAT 170 0.0 38.382355 7 ACAACGA 135 0.0 38.333332 13 CGAATAT 125 0.0 37.8 14 TTACGGG 125 0.0 37.8 3 ACACGAC 90 0.0 37.5 26 TCACGGT 30 1.1392782E-4 37.499996 14 CCGGATA 30 1.1392782E-4 37.499996 21 >>END_MODULE