##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551064_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 904856 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.85183388296038 31.0 31.0 34.0 30.0 34.0 2 31.970738990513407 33.0 31.0 34.0 30.0 34.0 3 31.67768131061738 33.0 31.0 34.0 30.0 34.0 4 35.53823481305313 37.0 35.0 37.0 33.0 37.0 5 31.000179034012042 37.0 35.0 37.0 0.0 37.0 6 33.31245634664521 37.0 35.0 37.0 17.0 37.0 7 29.71377324126712 35.0 32.0 37.0 0.0 37.0 8 32.737954989523196 35.0 35.0 37.0 17.0 37.0 9 36.580379640517386 39.0 35.0 39.0 32.0 39.0 10 36.86839231877779 38.0 37.0 39.0 33.0 39.0 11 36.977614117605455 39.0 37.0 39.0 33.0 39.0 12 37.00342485434147 39.0 37.0 39.0 33.0 39.0 13 36.85313574756646 39.0 37.0 39.0 33.0 39.0 14 38.021529392522126 40.0 37.0 41.0 33.0 41.0 15 38.13506790030679 40.0 37.0 41.0 33.0 41.0 16 38.200088190828154 40.0 37.0 41.0 33.0 41.0 17 38.19077400160909 40.0 37.0 41.0 33.0 41.0 18 38.08849032332216 40.0 37.0 41.0 33.0 41.0 19 37.96278965934911 40.0 37.0 41.0 33.0 41.0 20 37.80415005260505 40.0 36.0 41.0 33.0 41.0 21 37.69929800984908 40.0 36.0 41.0 33.0 41.0 22 37.707628617150135 39.0 36.0 41.0 33.0 41.0 23 37.630712511161995 39.0 36.0 41.0 33.0 41.0 24 37.573153076290595 39.0 35.0 41.0 33.0 41.0 25 37.443351207263916 39.0 35.0 41.0 33.0 41.0 26 37.2908142290044 39.0 35.0 41.0 32.0 41.0 27 37.25502842441228 39.0 35.0 41.0 32.0 41.0 28 37.13112031085609 39.0 35.0 41.0 32.0 41.0 29 37.07803783143395 39.0 35.0 41.0 32.0 41.0 30 36.92890913029255 39.0 35.0 41.0 31.0 41.0 31 36.795130937961396 39.0 35.0 41.0 31.0 41.0 32 36.671734508032216 39.0 35.0 41.0 31.0 41.0 33 36.43286556092903 39.0 35.0 41.0 30.0 41.0 34 36.17828914213975 39.0 35.0 40.0 29.0 41.0 35 36.00095705836067 39.0 35.0 40.0 29.0 41.0 36 35.837011635000486 39.0 35.0 40.0 27.0 41.0 37 35.68386461492215 39.0 35.0 40.0 27.0 41.0 38 35.513834245449 39.0 35.0 40.0 26.0 41.0 39 35.469024905620344 39.0 35.0 40.0 25.0 41.0 40 35.34138028592395 38.0 35.0 40.0 25.0 41.0 41 35.21003452483047 38.0 34.0 40.0 24.0 41.0 42 35.14611164649403 38.0 34.0 40.0 24.0 41.0 43 35.01705464736931 38.0 34.0 40.0 23.0 41.0 44 34.8606397039971 38.0 34.0 40.0 23.0 41.0 45 34.74092562794522 38.0 34.0 40.0 23.0 41.0 46 34.67574177548693 38.0 34.0 40.0 23.0 41.0 47 34.51139628847021 38.0 34.0 40.0 23.0 41.0 48 34.43511895815467 38.0 33.0 40.0 22.0 41.0 49 34.2993050827977 38.0 33.0 40.0 22.0 41.0 50 34.11034573456992 37.0 33.0 40.0 21.0 41.0 51 32.24478480553812 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 33.0 10 42.0 11 49.0 12 27.0 13 20.0 14 42.0 15 72.0 16 143.0 17 265.0 18 492.0 19 835.0 20 1427.0 21 2409.0 22 3549.0 23 5339.0 24 8086.0 25 11408.0 26 13945.0 27 15601.0 28 16236.0 29 17444.0 30 19947.0 31 24361.0 32 31085.0 33 43200.0 34 60944.0 35 73283.0 36 87292.0 37 135276.0 38 170028.0 39 161948.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.096373345593115 20.683291042994686 24.854120434632694 13.366215176779509 2 35.147470978807675 23.506944751430062 24.936453977207425 16.40913029255484 3 31.876895329201556 23.59314631278347 28.292126039944478 16.2378323180705 4 27.271411141662323 25.521519446188123 28.816629386333293 18.39044002581626 5 21.192653858735532 39.096386607371784 24.011665944636494 15.699293589256191 6 24.84605285260859 34.29904868841009 27.29837675829082 13.556521700690496 7 68.99075654026718 18.825757910650974 8.75951532619555 3.423970222886293 8 83.25490464781137 4.580397322888946 9.234729061861776 2.929968967437913 9 77.40590768033809 7.023659013146844 11.113702069721592 4.456731236793479 10 39.81793788182871 28.405845792037628 18.618432104113804 13.157784222019858 11 29.101205053621793 25.740338794239083 27.588699196336215 17.569756955802912 12 26.447744171448274 23.67183286622402 31.34996065672328 18.530462305604427 13 24.305745886638316 23.763560168689825 32.990663707816495 18.940030236855367 14 20.369871007099473 26.845044957429693 33.27170290079305 19.513381134677783 15 20.224433501021156 26.467968383919647 34.8106218005959 18.496976314463296 16 23.907229437612173 25.218708833228714 32.846110320316164 18.027951408842956 17 24.506219774196115 24.602036125085096 30.588513531434835 20.303230569283954 18 24.780959622304543 25.18743313853254 31.136556534962466 18.895050704200447 19 24.88241222912817 26.772436719212784 29.178565429195363 19.166585622463685 20 25.271203373796492 27.268316726639373 29.3528473038804 18.107632595683736 21 24.367523672274928 26.429840770244105 30.772189166010943 18.430446391470024 22 23.787873429584376 24.064823574137765 31.086824864950884 21.060478131326974 23 22.15755877178247 26.17698285694077 31.292935008443333 20.372523362833423 24 22.35272794787237 25.904342790455054 31.274147488661182 20.468781773011397 25 23.503076732651383 26.265173685094645 29.430870768387457 20.800878813866515 26 21.85198528826686 27.539188555969123 29.537849116323482 21.070977039440532 27 21.802474647899775 26.377567259320823 31.49981875569151 20.320139337087888 28 20.94697940887832 26.977994288593987 31.057648951877425 21.017377350650268 29 21.602000760341976 27.080220499173347 30.467168256606573 20.8506104838781 30 22.783735754639412 25.238601501233344 31.0375352542283 20.940127489898945 31 22.66404820214487 26.28329811594331 30.394007444278426 20.65864623763339 32 23.864791745868956 26.619705234866096 29.083522682062117 20.431980337202827 33 23.569606655644655 26.43823989673495 29.87536138346875 20.116792064151646 34 22.106390409081666 26.590750351437137 31.090582368907317 20.21227687057388 35 21.814852307991547 27.642298885126472 29.584486371312117 20.958362435569857 36 23.246350800569374 27.461828180395553 28.953667765920766 20.338153253114307 37 22.80495460051102 28.5479678534485 28.483206167611204 20.163871378429274 38 22.677420495636873 28.04612004562052 28.199183074433943 21.077276384308664 39 22.7005180934867 26.387624108145385 28.608972035329376 22.30288576303854 40 23.502524158540144 25.68364469042588 29.794906592872234 21.018924558161743 41 21.22116668287551 26.21444738168283 29.369424527217593 23.19496140822407 42 22.211711034683972 26.511511223885346 29.385338661621297 21.891439079809384 43 22.437271786892058 25.799906283430733 29.682291989001563 22.080529940675646 44 22.17391496547517 26.850349668897593 29.003067891465605 21.972667474161632 45 22.16043215716092 26.219531063506235 28.52277047397597 23.097266305356875 46 21.73506060632852 26.311368880794294 28.92780729751474 23.025763215362442 47 21.113414731183745 26.933677844872555 30.112636706835122 21.840270717108577 48 21.854306099534067 26.43183003704457 29.447116447257905 22.266747416163458 49 22.37803584216715 26.059505600891193 29.520277259586052 22.0421812973556 50 20.594105581440584 26.601580804017434 29.969188467557267 22.835125146984716 51 20.919461218138576 26.56444782374212 28.53315886726728 23.982932090852024 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 368.0 1 910.0 2 1452.0 3 7579.0 4 13706.0 5 10572.0 6 7438.0 7 5891.0 8 4344.0 9 4223.0 10 4102.0 11 3919.5 12 3737.0 13 3622.5 14 3508.0 15 3493.5 16 3479.0 17 3421.5 18 3364.0 19 3374.0 20 3384.0 21 3596.0 22 3808.0 23 4265.5 24 4723.0 25 6020.5 26 8476.0 27 9634.0 28 11472.5 29 13311.0 30 15537.5 31 17764.0 32 21446.5 33 25129.0 34 27720.5 35 30312.0 36 33078.0 37 35844.0 38 37749.5 39 39655.0 40 42530.5 41 45406.0 42 48842.5 43 52279.0 44 56069.0 45 59859.0 46 64034.0 47 68209.0 48 70227.5 49 72246.0 50 69631.5 51 67017.0 52 62311.0 53 57605.0 54 52933.5 55 48262.0 56 45206.0 57 42150.0 58 40385.0 59 38620.0 60 36492.0 61 34364.0 62 30869.0 63 27374.0 64 23024.5 65 18675.0 66 15640.0 67 12605.0 68 10561.5 69 8518.0 70 7293.5 71 6069.0 72 5011.0 73 3953.0 74 3115.5 75 1810.5 76 1343.0 77 1022.0 78 701.0 79 560.5 80 420.0 81 314.0 82 208.0 83 163.5 84 119.0 85 99.0 86 79.0 87 71.5 88 64.0 89 47.0 90 30.0 91 20.0 92 10.0 93 9.5 94 9.0 95 6.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 904856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.508928727385246 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30255648060444 27.87009295293509 2 8.490939451271634 6.369720854125827 3 3.89406362000892 4.38186464348455 4 2.3864398068041512 3.5805120250244773 5 1.7562929885357472 3.2938334265696887 6 1.2753792082341633 2.870286469322656 7 0.961376328651806 2.5242137334117123 8 0.7617807516309426 2.285886393505519 9 0.6282147044165381 2.1207294516109787 >10 5.434142913878977 40.421570268045734 >50 0.09446475404045111 2.1949205378211443 >100 0.012854305263706347 0.81595684365357 >500 5.978746634030328E-4 0.188151103973573 >1k 5.978746634030328E-4 0.37428390051477156 >5k 2.989373317015164E-4 0.7079773960006793 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6314 0.6977905876736188 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2063 0.22799207829754128 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1275 0.14090639836614888 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.315444667438797E-4 0.0 0.0 0.04453747336592784 0.0 2 3.315444667438797E-4 0.0 0.0 0.15825722545907858 0.0 3 3.315444667438797E-4 0.0 0.0 0.2540735763480598 0.0 4 3.315444667438797E-4 0.0 0.0 0.36469891341826766 0.0 5 3.315444667438797E-4 0.0 0.0 0.6859655016930871 0.0 6 3.315444667438797E-4 0.0 0.0 1.046906911154924 0.0 7 3.315444667438797E-4 0.0 0.0 1.3651895992290486 0.0 8 3.315444667438797E-4 0.0 0.0 1.9498130089207564 0.0 9 3.315444667438797E-4 0.0 0.0 2.2935141061119118 0.0 10 3.315444667438797E-4 0.0 0.0 2.8491826323746543 0.0 11 3.315444667438797E-4 0.0 0.0 3.4350217051110894 0.0 12 3.315444667438797E-4 0.0 0.0 3.891558435817412 0.0 13 3.315444667438797E-4 0.0 0.0 4.11269859513558 0.0 14 3.315444667438797E-4 0.0 0.0 4.23945909625399 0.0 15 3.315444667438797E-4 0.0 0.0 4.386775354310521 0.0 16 3.315444667438797E-4 0.0 0.0 4.674666466266456 0.0 17 3.315444667438797E-4 0.0 0.0 5.026214115837216 0.0 18 3.315444667438797E-4 0.0 0.0 5.4276039502418065 0.0 19 3.315444667438797E-4 0.0 0.0 5.674494063143749 0.0 20 3.315444667438797E-4 0.0 0.0 5.936745736338158 0.0 21 3.315444667438797E-4 0.0 0.0 6.240440467875551 0.0 22 3.315444667438797E-4 0.0 0.0 6.592982750846543 0.0 23 3.315444667438797E-4 0.0 0.0 6.9398887778828895 0.0 24 3.315444667438797E-4 0.0 0.0 7.223138267304411 0.0 25 3.315444667438797E-4 0.0 0.0 7.480748317964405 0.0 26 3.315444667438797E-4 0.0 0.0 7.729848727311307 0.0 27 3.315444667438797E-4 0.0 0.0 8.004478060597487 0.0 28 3.315444667438797E-4 0.0 0.0 8.267392822725384 0.0 29 3.315444667438797E-4 0.0 0.0 8.57097703944053 0.0 30 3.315444667438797E-4 0.0 0.0 8.934570804636317 0.0 31 3.315444667438797E-4 0.0 0.0 9.249427533220755 0.0 32 3.315444667438797E-4 0.0 0.0 9.57146772525131 0.0 33 3.315444667438797E-4 0.0 0.0 9.879030475567383 0.0 34 3.315444667438797E-4 0.0 0.0 10.207148982821575 0.0 35 3.315444667438797E-4 0.0 0.0 10.5470925760563 0.0 36 3.315444667438797E-4 0.0 0.0 10.878416013155684 0.0 37 3.315444667438797E-4 0.0 0.0 11.231289840593421 0.0 38 3.315444667438797E-4 0.0 0.0 11.603724791569045 0.0 39 3.315444667438797E-4 0.0 0.0 12.19497909059563 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATC 20 7.0324907E-4 45.0 14 CCTACGC 25 3.890146E-5 45.0 34 CAATACG 25 3.890146E-5 45.0 1 CGGTTTA 60 0.0 44.999996 1 CGTTTTT 2655 0.0 41.44068 1 AAGTACG 55 6.002665E-11 40.909092 1 CGTTATT 565 0.0 40.22124 1 CGGTTTT 555 0.0 39.324326 1 CTTACGG 70 0.0 38.571426 2 TACGGGA 485 0.0 38.505157 4 CGTTTTA 335 0.0 37.61194 1 ATTACGG 90 0.0 37.5 2 TTCACGG 60 1.546141E-10 37.499996 2 GTCAACG 30 1.1397301E-4 37.499996 1 TTGTACG 55 2.748493E-9 36.81818 1 CGGGATC 235 0.0 36.38298 6 AGGCGAT 180 0.0 36.25 7 TTACGGG 360 0.0 36.25 3 ACGGGAT 580 0.0 36.077587 5 ACGCACG 25 0.0021068724 36.0 1 >>END_MODULE