SRR3551063_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551063_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	654003
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4297	0.6570306252417802	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1403	0.21452500982411396	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	854	0.13058044076250414	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTACGG	70	0.0	45.000004	2
CGACGGT	20	7.0310547E-4	45.0	28
CACGCGA	20	7.0310547E-4	45.0	1
CGTTCAA	20	7.0310547E-4	45.0	9
CCGTACA	20	7.0310547E-4	45.0	28
GTCAACG	20	7.0310547E-4	45.0	1
CGTACAT	20	7.0310547E-4	45.0	29
ACCGTAC	20	7.0310547E-4	45.0	27
CGCACGA	20	7.0310547E-4	45.0	39
TTTGACG	20	7.0310547E-4	45.0	1
TATCGAG	20	7.0310547E-4	45.0	1
TGCCGTA	20	7.0310547E-4	45.0	45
CGTTTTA	235	0.0	42.12766	1
CGTTTTT	1855	0.0	41.48248	1
TACGGGT	60	3.6379788E-12	41.249996	4
CGGTTTT	535	0.0	39.95327	1
GCTACGA	80	0.0	39.375	10
CGTTATT	390	0.0	39.230766	1
AGGCGAT	115	0.0	39.130432	7
CGTTGAT	35	6.2441595E-6	38.57143	25