##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551051_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 730303 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.036931246345695 33.0 31.0 34.0 30.0 34.0 2 32.148141250960215 33.0 31.0 34.0 30.0 34.0 3 32.06288622667578 33.0 31.0 34.0 30.0 34.0 4 35.72388583916539 37.0 35.0 37.0 33.0 37.0 5 31.86244202748722 37.0 35.0 37.0 0.0 37.0 6 33.76181940920412 37.0 35.0 37.0 17.0 37.0 7 35.462121886395096 37.0 35.0 37.0 32.0 37.0 8 35.7313923125059 37.0 35.0 37.0 35.0 37.0 9 37.68803222771918 39.0 37.0 39.0 35.0 39.0 10 37.34211690216253 39.0 37.0 39.0 34.0 39.0 11 37.32666851977878 39.0 37.0 39.0 34.0 39.0 12 37.324306486485746 39.0 37.0 39.0 34.0 39.0 13 37.30689179696646 39.0 37.0 39.0 34.0 39.0 14 38.55885844642566 40.0 38.0 41.0 34.0 41.0 15 38.69823758083973 40.0 38.0 41.0 35.0 41.0 16 38.60075201662872 40.0 38.0 41.0 35.0 41.0 17 38.5875848791529 40.0 38.0 41.0 34.0 41.0 18 38.46485225995237 40.0 38.0 41.0 34.0 41.0 19 38.30209926564727 40.0 37.0 41.0 34.0 41.0 20 38.31742851939537 40.0 37.0 41.0 34.0 41.0 21 38.224962789417546 40.0 37.0 41.0 34.0 41.0 22 38.285358269102005 40.0 37.0 41.0 34.0 41.0 23 38.28098611124424 40.0 37.0 41.0 34.0 41.0 24 38.248870674227 40.0 37.0 41.0 34.0 41.0 25 37.966025060830916 40.0 36.0 41.0 34.0 41.0 26 38.046838093229795 40.0 36.0 41.0 34.0 41.0 27 38.03669435836906 40.0 36.0 41.0 34.0 41.0 28 37.955836139246315 40.0 36.0 41.0 34.0 41.0 29 37.88181754696338 40.0 36.0 41.0 34.0 41.0 30 37.73157716728536 40.0 36.0 41.0 33.0 41.0 31 37.685919406054744 40.0 36.0 41.0 33.0 41.0 32 37.568099816103725 40.0 36.0 41.0 33.0 41.0 33 37.40367765160488 40.0 36.0 41.0 33.0 41.0 34 37.222747270653414 40.0 36.0 41.0 32.0 41.0 35 37.181391833252775 40.0 36.0 41.0 32.0 41.0 36 37.04644784425095 40.0 35.0 41.0 32.0 41.0 37 36.9729208287519 40.0 35.0 41.0 31.0 41.0 38 36.84994173651211 40.0 35.0 41.0 31.0 41.0 39 36.77790725219532 40.0 35.0 41.0 31.0 41.0 40 36.71220849428251 40.0 35.0 41.0 31.0 41.0 41 36.5965428048358 40.0 35.0 41.0 30.0 41.0 42 36.58040566723675 40.0 35.0 41.0 30.0 41.0 43 36.49133852661156 39.0 35.0 41.0 30.0 41.0 44 36.416902299456524 39.0 35.0 41.0 30.0 41.0 45 36.42133607557411 39.0 35.0 41.0 30.0 41.0 46 36.304258643330236 39.0 35.0 41.0 30.0 41.0 47 36.26655648408948 39.0 35.0 41.0 30.0 41.0 48 36.238614657203925 39.0 35.0 41.0 30.0 41.0 49 36.16090444651056 39.0 35.0 41.0 30.0 41.0 50 36.05138689009904 39.0 35.0 41.0 29.0 41.0 51 35.11129763947293 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 13.0 9 23.0 10 28.0 11 21.0 12 23.0 13 16.0 14 13.0 15 26.0 16 48.0 17 93.0 18 185.0 19 346.0 20 594.0 21 1023.0 22 1556.0 23 2393.0 24 3689.0 25 5619.0 26 7808.0 27 9023.0 28 9373.0 29 9552.0 30 10563.0 31 12946.0 32 16300.0 33 23272.0 34 38336.0 35 53672.0 36 54631.0 37 82977.0 38 140668.0 39 245259.0 40 213.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.30052868466924 20.730984262696442 23.840926300453376 14.127560752180946 2 35.50663217869843 23.438490599107496 24.22090556933218 16.833971652861894 3 31.14364859517214 23.238984366762836 29.37109665440235 16.246270383662672 4 28.593474215496855 24.760270736940697 28.582519858195845 18.063735189366607 5 21.863527878154684 37.01573182637891 24.344005159502288 16.776735135964113 6 24.404527983590373 33.37422960059044 27.8054451371554 14.415797278663787 7 76.2991525435333 6.383788646630234 12.610793054389754 4.7062657554467116 8 77.03323141216728 6.264796940448006 12.013369793085884 4.688601854298832 9 70.05968755434388 9.237398723543516 14.712249573122389 5.990664148990214 10 36.07831270034493 29.1114783863684 21.38975192488597 13.420456988400705 11 26.743420196822417 26.108067473363793 28.820503270560298 18.32800905925349 12 25.504208527145583 22.77424575826746 32.699030402449395 19.022515312137564 13 23.471901388875576 23.890768626172974 33.31480221223246 19.322527772718995 14 19.52710039531537 27.292233497603053 32.849378956405765 20.331287150675813 15 19.21668129529798 26.21199693825713 35.482532592636204 19.088789173808678 16 21.52640753221608 26.145996935518546 33.04313415116739 19.284461381097984 17 21.48368553874214 25.73288073580418 31.162407932050122 21.621025793403557 18 22.125747806047627 25.49106329838437 31.92524198859925 20.45794690696875 19 22.79670219073453 27.010569585500814 30.41217138639715 19.780556837367502 20 23.41274785945012 26.270191961418753 31.434623710980237 18.88243646815089 21 22.780407584249275 27.247320632668902 31.484876825098624 18.487394957983195 22 21.946780993642363 25.03988070704899 31.197735734345883 21.815602564962763 23 20.81300501298776 26.443133877308462 31.489532426951556 21.254328682752227 24 20.75535770769119 25.084793571983138 32.87293082460294 21.286917895722734 25 20.278432376698436 27.155440960806683 30.291947315018557 22.274179347476323 26 19.47095931414769 27.596901560037406 31.175005442946286 21.757133682868616 27 20.2785693061647 26.840777047335145 31.814329120926523 21.06632452557363 28 19.14438253711131 26.67125836810201 33.02026693030153 21.16409216448515 29 19.855868043811952 25.856938832238125 32.38012167552372 21.9070714484262 30 20.674980110995026 26.015640083636516 32.42681462351928 20.882565181849177 31 21.656216666233057 27.191864198832537 29.559237741047212 21.592681393887194 32 21.463830766134055 27.369461716575177 29.684802061610043 21.481905455680725 33 21.273088019630208 26.680569571807865 30.645225337976157 21.40111707058577 34 20.146158512288732 27.238831005760623 30.65850749620363 21.95650298574701 35 20.108365979600247 26.41027080540543 30.153374695160778 23.327988519833546 36 21.301021630747783 27.8054451371554 30.160358097940172 20.733175134156646 37 21.45931209374739 27.945113192743285 30.31426681801937 20.281307895489952 38 20.176556853799042 28.515424419727154 29.274561380687192 22.033457345786612 39 22.302934535391476 26.189403576323798 29.782706629987825 21.724955258296898 40 20.989507095000295 26.344818520531888 30.66466932218545 22.001005062282367 41 19.26652362101758 26.15256954989915 30.415731552519983 24.16517527656329 42 21.539689690443556 25.470934666843764 29.59456554334297 23.394810099369714 43 21.674976003111038 25.842150449881764 30.24361121342785 22.239262333579347 44 20.513129481872593 26.16297618933511 29.818992938547424 23.50490139024487 45 20.604735294802296 26.346872462525827 29.17350743458537 23.87488480808651 46 20.877361862131195 27.110254236940012 29.55937467051347 22.453009230415322 47 19.8417643087869 26.02864838293147 31.439553171765695 22.690034136515937 48 20.070847305844286 24.858723023183526 31.81076895480369 23.259660716168497 49 21.19353199973162 25.089449173836066 31.280988849833562 22.436029976598753 50 19.130689590485044 25.532142138263158 31.444756491483673 23.892411779768125 51 19.175876314351715 25.006743776213437 30.2577149484529 25.559664960981948 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 335.0 1 878.0 2 1421.0 3 7815.0 4 14209.0 5 9126.5 6 4044.0 7 3908.5 8 3773.0 9 3676.5 10 3580.0 11 3526.5 12 3473.0 13 3319.0 14 3165.0 15 3035.5 16 2906.0 17 2891.0 18 2876.0 19 3101.5 20 3327.0 21 3748.5 22 4170.0 23 4130.0 24 4090.0 25 5125.0 26 7331.5 27 8503.0 28 9488.5 29 10474.0 30 13165.5 31 15857.0 32 17491.0 33 19125.0 34 20738.5 35 22352.0 36 24747.5 37 27143.0 38 29130.0 39 31117.0 40 33983.0 41 36849.0 42 40067.0 43 43285.0 44 47724.0 45 52163.0 46 56073.5 47 59984.0 48 63650.0 49 67316.0 50 64279.0 51 61242.0 52 53952.5 53 46663.0 54 41773.0 55 36883.0 56 33658.5 57 30434.0 58 28154.0 59 25874.0 60 24857.0 61 23840.0 62 21060.5 63 18281.0 64 15279.5 65 12278.0 66 10196.0 67 8114.0 68 6780.0 69 5446.0 70 4527.5 71 3609.0 72 3119.0 73 2629.0 74 2134.5 75 1262.0 76 884.0 77 624.5 78 365.0 79 280.0 80 195.0 81 175.0 82 155.0 83 105.0 84 55.0 85 30.0 86 5.0 87 6.0 88 7.0 89 5.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 730303.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.02819827864322 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8705076050645 25.875507873342208 2 10.426930559248142 7.304731821339761 3 3.773318136169659 3.9651760752645373 4 2.0439270233518894 2.86380324164188 5 1.2124849081641171 2.1235580886517598 6 0.8608068571140483 1.8091507962363944 7 0.7021481994229883 1.7216490445266526 8 0.5769822135747581 1.6168517904277673 9 0.4466273072018017 1.4080094885989085 >10 5.911791234681145 43.60234165682774 >50 0.12638577249325322 2.82357705772998 >100 0.04491066724829749 2.7727632339949624 >500 0.0015897581326830966 0.4033084846554905 >1k 0.0011923185995123225 0.5338930060938234 >5k 3.9743953317077416E-4 1.1756783406681455 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8445 1.1563693425879396 No Hit GCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC 1788 0.24482988567758862 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1042 0.14268050384566405 No Hit CTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGCT 1005 0.13761411359394662 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCC 941 0.12885062775313808 No Hit CCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC 752 0.10297095862950036 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3692946626263345E-4 0.0 0.0 0.14418672797455304 0.0 2 1.3692946626263345E-4 0.0 0.0 0.6697220194905402 0.0 3 1.3692946626263345E-4 0.0 0.0 0.9491950601325752 0.0 4 1.3692946626263345E-4 0.0 0.0 1.2852199703410776 0.0 5 1.3692946626263345E-4 0.0 0.0 2.1922407548647618 0.0 6 1.3692946626263345E-4 0.0 0.0 2.9265934824312647 0.0 7 1.3692946626263345E-4 0.0 0.0 3.6037096930999875 0.0 8 1.3692946626263345E-4 0.0 0.0 4.6694317290220635 0.0 9 1.3692946626263345E-4 0.0 0.0 5.116232577437036 0.0 10 2.738589325252669E-4 0.0 0.0 6.064195272373248 0.0 11 2.738589325252669E-4 0.0 0.0 7.373514828776549 0.0 12 2.738589325252669E-4 0.0 0.0 8.397062589089733 0.0 13 4.1078839878790036E-4 0.0 0.0 8.871386260223495 0.0 14 4.1078839878790036E-4 0.0 0.0 9.078834401611386 0.0 15 5.477178650505338E-4 0.0 0.0 9.412531510893423 0.0 16 5.477178650505338E-4 0.0 0.0 10.031863486799315 0.0 17 5.477178650505338E-4 0.0 0.0 10.754851068666019 0.0 18 5.477178650505338E-4 0.0 0.0 11.59149010753071 0.0 19 5.477178650505338E-4 0.0 0.0 12.106481830144475 0.0 20 9.585062638384342E-4 0.0 0.0 12.627361519807533 0.0 21 9.585062638384342E-4 0.0 0.0 13.267232915652817 0.0 22 9.585062638384342E-4 0.0 0.0 13.930382320762751 0.0 23 9.585062638384342E-4 0.0 0.0 14.609826332357938 0.0 24 0.0010954357301010676 0.0 0.0 15.15425789021817 0.0 25 0.0010954357301010676 0.0 0.0 15.626253760425467 0.0 26 0.0010954357301010676 0.0 0.0 16.079490293754784 0.0 27 0.0010954357301010676 0.0 0.0 16.529303590427535 0.0 28 0.0010954357301010676 0.0 0.0 16.992399045327762 0.0 29 0.0010954357301010676 0.0 0.0 17.478635580026374 0.0 30 0.0010954357301010676 0.0 0.0 18.021013195892664 0.0 31 0.0010954357301010676 0.0 0.0 18.534772553310063 0.0 32 0.0010954357301010676 0.0 0.0 19.039768424886656 0.0 33 0.0010954357301010676 0.0 0.0 19.532029856100824 0.0 34 0.0012323651963637011 0.0 0.0 20.02798838290408 0.0 35 0.0012323651963637011 0.0 0.0 20.533531972345724 0.0 36 0.0013692946626263345 0.0 0.0 21.040855644848783 0.0 37 0.0013692946626263345 0.0 0.0 21.504361888147795 0.0 38 0.001506224128888968 0.0 0.0 22.02866481446742 0.0 39 0.001506224128888968 0.0 0.0 22.529142013657346 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATT 35 1.2111195E-7 45.000004 37 CATACGG 30 2.16441E-6 45.000004 2 AACCGGC 20 7.031596E-4 45.0 36 TCCGCGC 20 7.031596E-4 45.0 13 GATCGGT 20 7.031596E-4 45.0 23 CGTTCTA 20 7.031596E-4 45.0 31 CGTAGCG 25 3.889404E-5 45.0 2 TTACGAA 20 7.031596E-4 45.0 31 CCAACGG 20 7.031596E-4 45.0 2 TTCGACG 20 7.031596E-4 45.0 25 AAGTCGA 20 7.031596E-4 45.0 44 CGTTATT 450 0.0 43.5 1 CGTTTTT 3385 0.0 43.07238 1 CGTAAGG 85 0.0 42.35294 2 CGTATGG 80 0.0 42.1875 2 ACAACGG 60 3.6379788E-12 41.250004 2 TAAGGGA 630 0.0 41.07143 4 CCATCGA 50 1.0804797E-9 40.5 31 ATACGGA 40 3.4559162E-7 39.375 34 ATACGGG 220 0.0 38.863636 3 >>END_MODULE