SRR3551028_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551028_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	315208
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC	4373	1.3873378848252582	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC	3727	1.1823938478718814	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG	3621	1.1487652597649807	No Hit
GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	2195	0.6963655744778052	No Hit
CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	1032	0.3274028577954874	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTACGCAT	887	0.2814014872718967	No Hit
CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT	828	0.2626836882312632	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCT	827	0.262366437400066	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTA	681	0.21604781604527803	No Hit
GAACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT	598	0.1897159970559123	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTC	583	0.18495723458795463	No Hit
TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	509	0.16148067307936348	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	478	0.15164589731225095	No Hit
ACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	365	0.11579655338696988	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTCACG	20	7.0254883E-4	45.0	1
GCGAAGT	20	7.0254883E-4	45.0	1
GGCGTAG	20	7.0254883E-4	45.0	1
CGGCACG	20	7.0254883E-4	45.0	15
GCACGTC	20	7.0254883E-4	45.0	17
TACGGGT	20	7.0254883E-4	45.0	4
AAGTTGT	20	7.0254883E-4	45.0	36
CAAGGTA	20	7.0254883E-4	45.0	39
CGGGCAC	35	1.2081728E-7	45.0	6
AGCGACA	20	7.0254883E-4	45.0	28
TCGTAGG	35	1.2081728E-7	45.0	2
TTAGTGT	20	7.0254883E-4	45.0	19
CAGTACG	20	7.0254883E-4	45.0	1
GACTGAT	20	7.0254883E-4	45.0	34
TATCGCG	20	7.0254883E-4	45.0	1
CAATAGT	20	7.0254883E-4	45.0	24
CGATACG	20	7.0254883E-4	45.0	10
AGTAACA	20	7.0254883E-4	45.0	20
TACCGGG	20	7.0254883E-4	45.0	3
ACAACGA	30	2.160472E-6	44.999996	13