##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551028_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 315208 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.94624501916195 33.0 31.0 34.0 30.0 34.0 2 32.05886271922032 33.0 31.0 34.0 30.0 34.0 3 32.132620364965355 33.0 31.0 34.0 30.0 34.0 4 35.73772556534098 37.0 35.0 37.0 33.0 37.0 5 35.75830245425243 37.0 35.0 37.0 35.0 37.0 6 35.761532067714015 37.0 35.0 37.0 35.0 37.0 7 35.93393885941981 37.0 35.0 37.0 35.0 37.0 8 35.46919811679906 37.0 35.0 37.0 33.0 37.0 9 37.30330448465775 39.0 37.0 39.0 34.0 39.0 10 37.05682279637573 39.0 37.0 39.0 33.0 39.0 11 37.035424227811475 39.0 37.0 39.0 33.0 39.0 12 36.92309205350118 39.0 35.0 39.0 33.0 39.0 13 36.842091571279916 39.0 35.0 39.0 33.0 39.0 14 38.00518070607345 40.0 37.0 41.0 33.0 41.0 15 38.104556356437655 40.0 37.0 41.0 33.0 41.0 16 38.290478033552446 40.0 37.0 41.0 34.0 41.0 17 38.20828151569757 40.0 37.0 41.0 34.0 41.0 18 38.20885573970204 40.0 37.0 41.0 34.0 41.0 19 38.209560036547295 40.0 37.0 41.0 34.0 41.0 20 37.97244676531052 40.0 36.0 41.0 33.0 41.0 21 38.036141214689984 40.0 37.0 41.0 34.0 41.0 22 37.992899926397804 40.0 36.0 41.0 33.0 41.0 23 37.9600898454354 40.0 36.0 41.0 34.0 41.0 24 37.88179868531255 40.0 36.0 41.0 33.0 41.0 25 37.843531890053555 40.0 36.0 41.0 33.0 41.0 26 37.672409964214104 40.0 36.0 41.0 33.0 41.0 27 37.59637128499276 40.0 36.0 41.0 33.0 41.0 28 37.608610822060356 40.0 36.0 41.0 33.0 41.0 29 37.60816032588006 40.0 36.0 41.0 33.0 41.0 30 37.52570048983528 40.0 36.0 41.0 33.0 41.0 31 37.57011560620289 40.0 36.0 41.0 33.0 41.0 32 37.412276972665666 40.0 36.0 41.0 33.0 41.0 33 37.377741047181544 40.0 36.0 41.0 33.0 41.0 34 37.33588931753001 40.0 35.0 41.0 32.0 41.0 35 37.28641722291312 40.0 35.0 41.0 32.0 41.0 36 37.22911220527398 40.0 35.0 41.0 32.0 41.0 37 37.18090594147357 40.0 35.0 41.0 32.0 41.0 38 37.11593297124438 40.0 35.0 41.0 32.0 41.0 39 37.025732214918406 39.0 35.0 41.0 32.0 41.0 40 36.987087891170276 39.0 35.0 41.0 31.0 41.0 41 36.85934049897211 39.0 35.0 41.0 31.0 41.0 42 36.88694449379457 39.0 35.0 41.0 31.0 41.0 43 36.83088627192203 39.0 35.0 41.0 31.0 41.0 44 36.806914799116775 39.0 35.0 41.0 31.0 41.0 45 36.68370409380473 39.0 35.0 41.0 31.0 41.0 46 36.63218890383493 39.0 35.0 41.0 31.0 41.0 47 36.48542866932311 39.0 35.0 41.0 31.0 41.0 48 36.46069896703129 39.0 35.0 41.0 31.0 41.0 49 36.46655541737519 39.0 35.0 41.0 31.0 41.0 50 36.331784091774324 39.0 35.0 41.0 31.0 41.0 51 35.360092383442044 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 3.0 11 7.0 12 2.0 13 3.0 14 5.0 15 4.0 16 18.0 17 34.0 18 83.0 19 142.0 20 262.0 21 467.0 22 781.0 23 1283.0 24 1604.0 25 2008.0 26 2357.0 27 2641.0 28 2879.0 29 3700.0 30 4537.0 31 5870.0 32 7818.0 33 10803.0 34 19475.0 35 25774.0 36 22092.0 37 33194.0 38 59603.0 39 107656.0 40 96.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.82431917971625 19.83166670896678 22.79447222151722 10.549541889799752 2 30.07982030912921 29.7549554579833 23.56602624298876 16.599197989898734 3 30.55855181340575 29.099832491561127 24.282061369000786 16.059554326032334 4 28.22168219080734 23.550163701428897 29.693408796731045 18.534745311032715 5 29.03669957615289 27.483439506611507 23.35124743026827 20.128613486967335 6 24.413720463947616 37.06917337123423 24.040316235628538 14.476789929189614 7 74.26017106164818 6.0115860003553205 14.305791731174336 5.422451206822162 8 72.391880916728 10.458490901246162 10.32714905713053 6.822479124895307 9 66.55002411106317 7.87194487449557 12.09994670186036 13.478084312580899 10 40.66870130199741 24.579008147001343 19.583576558970584 15.168713992030657 11 32.92143600416233 24.50762670998198 22.919786299840105 19.651150986015583 12 27.626836882312634 21.365257226973934 28.675350879419305 22.33255501129413 13 24.343925281084235 24.513971726605924 32.56167356158473 18.58042943072511 14 19.363087231288546 30.765082104515113 27.699487322656786 22.172343341539555 15 17.319991878378723 25.300436537143728 36.63104997335093 20.748521611126623 16 18.91290830181975 25.48602827339408 30.487487627217586 25.113575797568586 17 19.05567117585848 26.891766706428772 28.72515925991726 25.32740285779549 18 19.65622699931474 26.8768559173625 29.81555036674196 23.651366716580796 19 21.528324154209283 27.409202812111367 26.81562650694145 24.2468465267379 20 24.77760716733078 26.907311997157436 29.739727418085838 18.575353417425955 21 22.182495368137864 29.392337757924924 27.590987538387353 20.83417933554986 22 19.284409025151646 24.502550696682825 29.529707367833304 26.683332910332226 23 20.917933554985915 27.68870079439608 29.14995812289028 22.243407527727722 24 22.854749879444682 24.470825613563107 27.91331438288368 24.761110124108527 25 19.215248343950663 31.030621050227154 25.487931778381263 24.266198827440927 26 18.767607421131444 27.37525697317327 28.429481485241492 25.427654120453795 27 22.503553209309406 27.407299307124184 26.54183903961828 23.547308443948122 28 17.188015532600694 27.372084464861295 31.089946955661024 24.349953046876983 29 19.759016268622624 24.16912007309459 28.25245552143347 27.819408136849315 30 18.86024466384102 27.809573361082208 27.334648866780032 25.99553310829674 31 22.58984543539504 25.90828912971752 25.480000507601332 26.02186492728611 32 22.516560493388493 29.6537524428314 23.039389863201443 24.790297200578664 33 21.066089693154996 26.023768432273293 23.888670338316288 29.021471536255426 34 21.859216771147942 25.212240806070913 26.324522220248213 26.60402020253293 35 19.370384000406084 24.615809243420216 24.03524022232938 31.978566533844315 36 19.991878378721353 27.827339407629246 25.305829801274076 26.87495241237532 37 19.63021243115657 26.875904164868913 28.62776325473973 24.866120149234792 38 19.11055556965559 26.99296972158067 25.541864419684778 28.35461028907896 39 23.301439049770313 26.821337021903 25.519656861500977 24.357567066825712 40 21.64126545011548 23.041610619019824 26.985355701631935 28.33176822923276 41 20.217443719702548 26.116088424151673 25.310271312910842 28.35619654323494 42 20.17239410167255 24.474632623537474 27.89808634298622 27.454886931803763 43 21.93472246897287 25.994581355803152 25.568196238674147 26.502499936549835 44 20.417311743356766 24.723040024364863 27.41872033704728 27.440927895231088 45 20.47314788964747 23.356323443567423 26.049465749600266 30.121062917184844 46 23.758597497525443 25.24491764168422 25.670351006319635 25.3261338544707 47 18.818684804954188 23.840448211974316 32.22475317885333 25.116113804218166 48 20.517880256846276 23.98035582853227 27.56180046191721 27.939963452704248 49 20.17429760665973 22.10794142280653 31.877680769523614 25.840080201010128 50 20.561026369889092 22.267835841729905 29.36949569807873 27.801642090302277 51 19.527105911017486 21.556559478185832 26.009174894038225 32.90715971675846 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 139.0 1 385.5 2 632.0 3 841.0 4 1050.0 5 777.0 6 504.0 7 498.0 8 492.0 9 494.5 10 497.0 11 530.0 12 563.0 13 525.0 14 487.0 15 509.0 16 531.0 17 598.0 18 665.0 19 711.5 20 758.0 21 709.5 22 661.0 23 953.0 24 1245.0 25 1394.5 26 2039.0 27 2534.0 28 2742.5 29 2951.0 30 3588.0 31 4225.0 32 4841.0 33 5457.0 34 6218.5 35 6980.0 36 7305.0 37 7630.0 38 8239.5 39 8849.0 40 10503.0 41 12157.0 42 13633.5 43 15110.0 44 17231.0 45 19352.0 46 20632.0 47 21912.0 48 32052.5 49 42193.0 50 38940.0 51 35687.0 52 35231.0 53 34775.0 54 29409.5 55 24044.0 56 20285.5 57 16527.0 58 14746.0 59 12965.0 60 11482.0 61 9999.0 62 8920.0 63 7841.0 64 6479.0 65 5117.0 66 4123.0 67 3129.0 68 2709.0 69 2289.0 70 1933.0 71 1577.0 72 1232.0 73 887.0 74 713.5 75 423.5 76 307.0 77 241.5 78 176.0 79 134.0 80 92.0 81 90.5 82 89.0 83 61.5 84 34.0 85 19.0 86 4.0 87 5.5 88 7.0 89 4.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 315208.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.05534221356438 #Duplication Level Percentage of deduplicated Percentage of total 1 70.64930317239951 22.64687590341126 2 12.113177246707167 7.765840838735196 3 4.458351363892931 4.2874193603369815 4 2.239509722340798 2.871530021609553 5 1.3397025309156319 2.147231154643945 6 0.8968007545173521 1.724835305006188 7 0.7248389558164531 1.6264472544893351 8 0.5668740522065373 1.453707338837641 9 0.48289271113400295 1.3931361997052718 >10 6.363586141545651 42.554910775611155 >50 0.10097756485406287 2.250105649442446 >100 0.051988449231794735 2.912862875342885 >500 0.0069984450888954455 1.5745291348398713 >1k 0.004998889349211032 4.790568187988276 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC 4373 1.3873378848252582 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 3727 1.1823938478718814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG 3621 1.1487652597649807 No Hit GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 2195 0.6963655744778052 No Hit CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 1032 0.3274028577954874 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTACGCAT 887 0.2814014872718967 No Hit CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT 828 0.2626836882312632 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCT 827 0.262366437400066 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTA 681 0.21604781604527803 No Hit GAACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT 598 0.1897159970559123 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTC 583 0.18495723458795463 No Hit TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 509 0.16148067307936348 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 478 0.15164589731225095 No Hit ACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 365 0.11579655338696988 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1725083119717775E-4 0.0 0.0 0.2782289789599249 0.0 2 3.1725083119717775E-4 0.0 0.0 1.6341590314966625 0.0 3 3.1725083119717775E-4 0.0 0.0 2.1839547219613715 0.0 4 3.1725083119717775E-4 0.0 0.0 3.1011268749524126 0.0 5 3.1725083119717775E-4 0.0 0.0 6.209867769853557 0.0 6 3.1725083119717775E-4 0.0 0.0 7.243788228725159 0.0 7 3.1725083119717775E-4 0.0 0.0 8.488680490342885 0.0 8 3.1725083119717775E-4 0.0 0.0 10.221187279510673 0.0 9 3.1725083119717775E-4 0.0 0.0 10.777327986599325 0.0 10 3.1725083119717775E-4 0.0 0.0 13.130377401588792 0.0 11 3.1725083119717775E-4 0.0 0.0 14.977411740818761 0.0 12 3.1725083119717775E-4 0.0 0.0 17.935775741732442 0.0 13 3.1725083119717775E-4 0.0 0.0 18.646100352782923 0.0 14 3.1725083119717775E-4 0.0 0.0 18.944950635770667 0.0 15 3.1725083119717775E-4 0.0 0.0 19.662254765107484 0.0 16 3.1725083119717775E-4 0.0 0.0 20.682850689068804 0.0 17 3.1725083119717775E-4 0.0 0.0 21.81099464480597 0.0 18 3.1725083119717775E-4 0.0 0.0 22.966104921194894 0.0 19 3.1725083119717775E-4 0.0 0.0 23.997804624248115 0.0 20 3.1725083119717775E-4 0.0 0.0 24.764599883251694 0.0 21 3.1725083119717775E-4 0.0 0.0 25.64750894647344 0.0 22 3.1725083119717775E-4 0.0 0.0 26.601482195883353 0.0 23 3.1725083119717775E-4 0.0 0.0 27.495177787365805 0.0 24 3.1725083119717775E-4 0.0 0.0 28.149349001294382 0.0 25 3.1725083119717775E-4 0.0 0.0 28.772112382934445 0.0 26 3.1725083119717775E-4 0.0 0.0 29.31778381259359 0.0 27 3.1725083119717775E-4 0.0 0.0 29.838709677419356 0.0 28 3.1725083119717775E-4 0.0 0.0 30.444976015837163 0.0 29 3.1725083119717775E-4 0.0 0.0 30.992233699652292 0.0 30 3.1725083119717775E-4 0.0 0.0 31.659412197659957 0.0 31 3.1725083119717775E-4 0.0 0.0 32.238712215426006 0.0 32 3.1725083119717775E-4 0.0 0.0 32.808494708256134 0.0 33 3.1725083119717775E-4 0.0 0.0 33.326882566432324 0.0 34 3.1725083119717775E-4 0.0 0.0 33.85383619705084 0.0 35 3.1725083119717775E-4 0.0 0.0 34.43028095733611 0.0 36 3.1725083119717775E-4 0.0 0.0 35.00767747011497 0.0 37 3.1725083119717775E-4 0.0 0.0 35.55620415725489 0.0 38 6.345016623943555E-4 0.0 0.0 36.074274764599885 0.0 39 6.345016623943555E-4 0.0 0.0 36.61835994010304 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCACG 20 7.0254883E-4 45.0 1 GCGAAGT 20 7.0254883E-4 45.0 1 GGCGTAG 20 7.0254883E-4 45.0 1 CGGCACG 20 7.0254883E-4 45.0 15 GCACGTC 20 7.0254883E-4 45.0 17 TACGGGT 20 7.0254883E-4 45.0 4 AAGTTGT 20 7.0254883E-4 45.0 36 CAAGGTA 20 7.0254883E-4 45.0 39 CGGGCAC 35 1.2081728E-7 45.0 6 AGCGACA 20 7.0254883E-4 45.0 28 TCGTAGG 35 1.2081728E-7 45.0 2 TTAGTGT 20 7.0254883E-4 45.0 19 CAGTACG 20 7.0254883E-4 45.0 1 GACTGAT 20 7.0254883E-4 45.0 34 TATCGCG 20 7.0254883E-4 45.0 1 CAATAGT 20 7.0254883E-4 45.0 24 CGATACG 20 7.0254883E-4 45.0 10 AGTAACA 20 7.0254883E-4 45.0 20 TACCGGG 20 7.0254883E-4 45.0 3 ACAACGA 30 2.160472E-6 44.999996 13 >>END_MODULE