##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551014_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 559269 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2029488493015 33.0 31.0 34.0 30.0 34.0 2 32.324368059019896 34.0 31.0 34.0 30.0 34.0 3 32.37483035891494 34.0 31.0 34.0 30.0 34.0 4 35.904673779522916 37.0 35.0 37.0 35.0 37.0 5 35.925055742406606 37.0 35.0 37.0 35.0 37.0 6 35.94700939977006 37.0 35.0 37.0 35.0 37.0 7 36.080562305437994 37.0 35.0 37.0 35.0 37.0 8 35.77496875385548 37.0 35.0 37.0 35.0 37.0 9 37.497551267815666 39.0 37.0 39.0 35.0 39.0 10 37.24653073923282 39.0 37.0 39.0 34.0 39.0 11 37.19824985829717 39.0 37.0 39.0 34.0 39.0 12 37.1426504955576 39.0 37.0 39.0 34.0 39.0 13 37.127452084774944 39.0 37.0 39.0 34.0 39.0 14 38.34531504517504 40.0 38.0 41.0 34.0 41.0 15 38.47483947796141 40.0 38.0 41.0 34.0 41.0 16 38.574585753903754 40.0 38.0 41.0 35.0 41.0 17 38.53333905508798 40.0 38.0 41.0 34.0 41.0 18 38.51014628023366 40.0 38.0 41.0 34.0 41.0 19 38.52043113421269 40.0 38.0 41.0 34.0 41.0 20 38.3951711966871 40.0 37.0 41.0 34.0 41.0 21 38.367941008709586 40.0 37.0 41.0 34.0 41.0 22 38.33098026173452 40.0 37.0 41.0 34.0 41.0 23 38.36444895032623 40.0 37.0 41.0 34.0 41.0 24 38.27980274250852 40.0 37.0 41.0 34.0 41.0 25 38.19762761747924 40.0 37.0 41.0 34.0 41.0 26 38.06197554307498 40.0 37.0 41.0 34.0 41.0 27 38.020943410058486 40.0 37.0 41.0 34.0 41.0 28 38.013177916172715 40.0 37.0 41.0 34.0 41.0 29 38.00708603552137 40.0 37.0 41.0 34.0 41.0 30 37.90698751405853 40.0 36.0 41.0 34.0 41.0 31 37.93399061989847 40.0 36.0 41.0 34.0 41.0 32 37.86559061918326 40.0 36.0 41.0 34.0 41.0 33 37.85075697025939 40.0 36.0 41.0 33.0 41.0 34 37.76842092088065 40.0 36.0 41.0 33.0 41.0 35 37.729067765243556 40.0 36.0 41.0 33.0 41.0 36 37.678069050850304 40.0 36.0 41.0 33.0 41.0 37 37.62696305355741 40.0 36.0 41.0 33.0 41.0 38 37.556937716912614 40.0 36.0 41.0 33.0 41.0 39 37.50153682753737 40.0 35.0 41.0 33.0 41.0 40 37.401724393806916 40.0 35.0 41.0 33.0 41.0 41 37.31787923163987 40.0 35.0 41.0 33.0 41.0 42 37.292204645707166 40.0 35.0 41.0 33.0 41.0 43 37.234954914361424 39.0 35.0 41.0 33.0 41.0 44 37.159790726823765 39.0 35.0 41.0 32.0 41.0 45 37.05347516132666 39.0 35.0 41.0 32.0 41.0 46 36.99320541635599 39.0 35.0 41.0 32.0 41.0 47 36.95518793281945 39.0 35.0 41.0 32.0 41.0 48 36.877804777307524 39.0 35.0 41.0 32.0 41.0 49 36.816160023173104 39.0 35.0 41.0 32.0 41.0 50 36.71668016643154 39.0 35.0 41.0 32.0 41.0 51 35.78434349123588 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 13.0 10 9.0 11 20.0 12 13.0 13 13.0 14 20.0 15 24.0 16 38.0 17 61.0 18 100.0 19 186.0 20 312.0 21 491.0 22 777.0 23 1232.0 24 1666.0 25 2267.0 26 3176.0 27 3916.0 28 4580.0 29 5500.0 30 6813.0 31 8684.0 32 11472.0 33 16726.0 34 32905.0 35 42337.0 36 37958.0 37 58444.0 38 108290.0 39 211009.0 40 211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.69668263393823 22.212387956421686 23.790698214991355 10.30023119464873 2 31.893418015302117 24.56295628758254 25.200931930788222 18.342693766327116 3 33.45527822925998 24.18281721318364 24.678821819196127 17.683082738360252 4 29.75401819160368 25.931707282184423 25.00335259061382 19.310921935598074 5 26.94338502581048 29.33686651682822 23.19724497513719 20.522503482224117 6 27.475150598370373 34.99317859563108 22.476303889541526 15.05536691645702 7 80.34291190822306 6.6413479023511055 7.742785672011143 5.272954517414696 8 80.82246646962375 6.3751075064056835 7.548782428491477 5.253643595479099 9 74.12854994644795 8.809892913785673 9.841596798678275 7.219960341088099 10 41.08935056296701 27.149368193123525 16.933175269861195 14.828105974048267 11 31.003327557937236 26.606516720933932 23.39929443613002 18.99086128499881 12 30.8495554017834 22.745762772476212 26.532312715348073 19.872369110392317 13 26.34331600714504 23.854889149943943 27.666829379064456 22.134965463846555 14 20.27879249520356 28.000658001784473 28.148887208123462 23.571662294888508 15 20.218714071403923 27.212307494246957 32.202392766271686 20.366585668077438 16 23.133054040184597 26.083870194843627 30.00541778643193 20.777657978539843 17 22.356862261273196 26.53123988635165 27.778045985026882 23.333851867348272 18 23.630310280026247 27.299743057455355 27.894805540804157 21.17514112171424 19 25.441066821154042 28.58999873048569 25.33306870218088 20.635865746179388 20 27.554003529607396 26.755818756269345 26.125710525704086 19.56446718841917 21 25.70820124126315 26.79068569865306 26.721488228383837 20.779624831699948 22 23.7928438729842 25.671188640886587 27.189956890154825 23.346010595974388 23 24.05372012394751 25.88414519667638 28.15443015793831 21.907704521437804 24 24.03977334699402 25.1365621910029 27.720649633718303 23.103014828284778 25 23.026665164706074 27.22696949053139 26.052400544281912 23.69396480048063 26 22.569997621895723 28.600548215617174 25.759339423425935 23.070114739061168 27 23.308461581099614 27.70169632144818 26.831453200517103 22.158388896935104 28 20.47440498221786 29.004110723104624 27.287941938494715 23.233542356182806 29 22.44376140998339 28.50953655575403 26.30558818743753 22.74111384682505 30 23.510511042092446 27.251823362281836 26.38158024135076 22.856085354274956 31 23.50782896960139 28.309453947921305 24.315132789409034 23.867584293068273 32 23.988456359998498 29.57789543135772 24.48750064816752 21.946147560476266 33 24.813998272745316 28.58195251301252 24.357509534767704 22.246539679474456 34 22.641340750157795 27.83293906867715 26.219583062891022 23.306137118274034 35 23.64980000679458 27.489991399487547 25.421219484720233 23.43898910899764 36 23.701474603455583 29.946412191628713 24.35178778012012 22.00032542479558 37 24.308338205765025 28.860172832751324 25.012471637083404 21.819017324400246 38 22.63150648435726 28.557456250927547 25.021054269054783 23.78998299566041 39 24.442799439983265 26.36137529525148 26.00716292159945 23.18866234316581 40 24.20266454961745 26.25766849226401 27.55972528425498 21.97994167386356 41 21.78254113852189 26.992913964478632 27.0574625090967 24.16708238790278 42 22.963368253917167 27.212307494246957 25.528502384362444 24.295821867473432 43 24.076070728039635 26.594000382642342 25.77114054238658 23.558788346931443 44 22.29803547130272 27.36250355374605 25.609500973592315 24.729960001358915 45 23.081200638690863 26.359229637258636 25.47235766688302 25.08721205716748 46 22.887197395171196 28.14101979548303 25.00460422444298 23.967178584902793 47 23.022910263218595 26.711832767416038 27.40112539761725 22.86413157174812 48 22.809417292930593 24.796654203969826 27.876567447864982 24.517361055234602 49 22.886124566174775 25.74110133048676 27.372337819546587 24.000436283791878 50 20.837021183008535 25.707664826764937 28.1345828215045 25.320731168722027 51 21.23325269235377 24.68293433034908 26.29485989747331 27.78895307982384 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 165.0 1 533.0 2 901.0 3 1261.0 4 1621.0 5 1234.5 6 848.0 7 822.5 8 797.0 9 796.0 10 795.0 11 772.5 12 750.0 13 802.0 14 854.0 15 843.5 16 833.0 17 893.0 18 953.0 19 974.0 20 995.0 21 1209.5 22 1424.0 23 1618.5 24 1813.0 25 2603.5 26 4286.0 27 5178.0 28 6031.0 29 6884.0 30 8491.0 31 10098.0 32 11334.0 33 12570.0 34 14098.0 35 15626.0 36 16483.0 37 17340.0 38 18662.0 39 19984.0 40 22161.5 41 24339.0 42 26392.0 43 28445.0 44 30731.0 45 33017.0 46 35184.5 47 37352.0 48 40616.5 49 43881.0 50 47316.5 51 50752.0 52 49851.0 53 48950.0 54 43513.0 55 38076.0 56 35187.0 57 32298.0 58 30644.5 59 28991.0 60 28053.0 61 27115.0 62 24374.5 63 21634.0 64 18663.0 65 15692.0 66 12879.0 67 10066.0 68 8190.5 69 6315.0 70 4955.5 71 3596.0 72 2893.0 73 2190.0 74 1760.5 75 1008.0 76 685.0 77 578.0 78 471.0 79 310.5 80 150.0 81 111.5 82 73.0 83 42.0 84 11.0 85 8.0 86 5.0 87 4.5 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 559269.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.281066783621657 #Duplication Level Percentage of deduplicated Percentage of total 1 70.88482171712211 20.755831986441674 2 10.15511475241844 5.947051865218117 3 3.5560410143007295 3.1237402327511203 4 1.8511781680260977 2.168178862654182 5 1.1678200685437485 1.7097508709141567 6 0.9649771337648133 1.6953335939061187 7 0.7834703714776445 1.6058593789158044 8 0.7222801279497724 1.6919306130384064 9 0.6633998360336227 1.7482549412829749 >10 9.077933134849413 53.612252416407436 >50 0.11736820838425968 2.342721186260693 >100 0.05127137524154502 2.6872922069390923 >500 0.0037063644752924115 0.7146457232022854 >1k 6.177274125487352E-4 0.19715612206795521 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 1090 0.19489726768335094 No Hit CTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGCT 772 0.13803733087297884 No Hit CCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 759 0.13571286804739757 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 706 0.12623621191233556 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 580 0.10370680298747113 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 580 0.10370680298747113 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.364144982110576E-4 0.0 0.0 0.14447430485151153 0.0 2 5.364144982110576E-4 0.0 0.0 0.6340419368854702 0.0 3 5.364144982110576E-4 0.0 0.0 0.8866931655428782 0.0 4 5.364144982110576E-4 0.0 0.0 1.2809578217280058 0.0 5 5.364144982110576E-4 0.0 0.0 2.4051038051456453 0.0 6 5.364144982110576E-4 0.0 0.0 3.016258723440777 0.0 7 5.364144982110576E-4 0.0 0.0 3.6218706919210613 0.0 8 5.364144982110576E-4 0.0 0.0 4.52715956006859 0.0 9 5.364144982110576E-4 0.0 0.0 4.851869136319016 0.0 10 5.364144982110576E-4 0.0 0.0 5.6568484933010765 0.0 11 7.152193309480769E-4 0.0 0.0 6.856450116133739 0.0 12 7.152193309480769E-4 0.0 0.0 7.78677166086445 0.0 13 7.152193309480769E-4 0.0 0.0 8.16047376128482 0.0 14 8.940241636850961E-4 0.0 0.0 8.318358428591608 0.0 15 8.940241636850961E-4 0.0 0.0 8.666670242763322 0.0 16 8.940241636850961E-4 0.0 0.0 9.300354569983318 0.0 17 8.940241636850961E-4 0.0 0.0 10.005203220632648 0.0 18 8.940241636850961E-4 0.0 0.0 10.775315635230989 0.0 19 8.940241636850961E-4 0.0 0.0 11.223042936404486 0.0 20 8.940241636850961E-4 0.0 0.0 11.70617359445991 0.0 21 8.940241636850961E-4 0.0 0.0 12.308745880783666 0.0 22 8.940241636850961E-4 0.0 0.0 12.99106512250813 0.0 23 8.940241636850961E-4 0.0 0.0 13.618133670916858 0.0 24 8.940241636850961E-4 0.0 0.0 14.107343693285342 0.0 25 8.940241636850961E-4 0.0 0.0 14.561865578102845 0.0 26 8.940241636850961E-4 0.0 0.0 14.941110628338063 0.0 27 8.940241636850961E-4 0.0 0.0 15.335196479690453 0.0 28 8.940241636850961E-4 0.0 0.0 15.747878033647494 0.0 29 8.940241636850961E-4 0.0 0.0 16.16789058574675 0.0 30 8.940241636850961E-4 0.0 0.0 16.67498109138894 0.0 31 8.940241636850961E-4 0.0 0.0 17.10858281077621 0.0 32 8.940241636850961E-4 0.0 0.0 17.565250353586556 0.0 33 0.0010728289964221152 0.0 0.0 17.990090636169715 0.0 34 0.0010728289964221152 0.0 0.0 18.435851084183103 0.0 35 0.0010728289964221152 0.0 0.0 18.882684361192915 0.0 36 0.0010728289964221152 0.0 0.0 19.358305216273386 0.0 37 0.0010728289964221152 0.0 0.0 19.83499890035028 0.0 38 0.0010728289964221152 0.0 0.0 20.32975187253361 0.0 39 0.0010728289964221152 0.0 0.0 20.811273287094405 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACCGG 20 7.030175E-4 45.000004 2 CGCGCAA 30 2.163495E-6 45.000004 18 TTACGTG 20 7.030175E-4 45.000004 14 CACGTCT 30 2.163495E-6 45.000004 40 CTTACGT 20 7.030175E-4 45.000004 13 TCTATCG 20 7.030175E-4 45.000004 10 GGTACTC 25 3.8882285E-5 45.0 8 CGTCTAT 25 3.8882285E-5 45.0 42 CGTAAGG 115 0.0 43.04348 2 ATGGGCG 70 0.0 41.785717 5 AACGGGC 65 0.0 41.538464 4 TGCAACG 40 3.4539698E-7 39.375004 1 CGCAATC 35 6.242535E-6 38.57143 20 CAATCGG 35 6.242535E-6 38.57143 22 GATAGCG 35 6.242535E-6 38.57143 1 ATAACGG 65 9.094947E-12 38.076927 2 GCGTAAG 65 9.094947E-12 38.076927 1 CGAATAT 95 0.0 37.894737 14 CCGATTG 30 1.13917245E-4 37.500004 11 ACGGGCC 30 1.13917245E-4 37.500004 5 >>END_MODULE