##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551012_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 335986 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0676129362533 33.0 31.0 34.0 30.0 34.0 2 32.20901763763966 33.0 31.0 34.0 30.0 34.0 3 32.238771853589135 34.0 31.0 34.0 30.0 34.0 4 35.79697368342728 37.0 35.0 37.0 35.0 37.0 5 35.84053204597811 37.0 35.0 37.0 35.0 37.0 6 35.84919907377093 37.0 35.0 37.0 35.0 37.0 7 36.0189888864417 37.0 35.0 37.0 35.0 37.0 8 35.75505229384558 37.0 35.0 37.0 35.0 37.0 9 37.479731298327906 39.0 37.0 39.0 35.0 39.0 10 37.07944378634824 39.0 37.0 39.0 33.0 39.0 11 37.072806605037115 39.0 37.0 39.0 34.0 39.0 12 37.04347502574512 39.0 37.0 39.0 34.0 39.0 13 37.03780812295751 39.0 37.0 39.0 33.0 39.0 14 38.22261344222676 40.0 37.0 41.0 34.0 41.0 15 38.36518485889293 40.0 38.0 41.0 34.0 41.0 16 38.45847148393088 40.0 38.0 41.0 34.0 41.0 17 38.437137261671616 40.0 38.0 41.0 34.0 41.0 18 38.41285946438244 40.0 37.0 41.0 34.0 41.0 19 38.35530349478847 40.0 37.0 41.0 34.0 41.0 20 38.21455953521873 40.0 37.0 41.0 34.0 41.0 21 38.19875530528058 40.0 37.0 41.0 34.0 41.0 22 38.187460191793704 40.0 37.0 41.0 34.0 41.0 23 38.20599370211854 40.0 37.0 41.0 34.0 41.0 24 38.113992844939965 40.0 37.0 41.0 34.0 41.0 25 38.03883495145631 40.0 36.0 41.0 34.0 41.0 26 37.8987219705583 40.0 36.0 41.0 34.0 41.0 27 37.84466614680374 40.0 36.0 41.0 33.0 41.0 28 37.82177233575209 40.0 36.0 41.0 33.0 41.0 29 37.80972421469942 40.0 36.0 41.0 33.0 41.0 30 37.70216020905633 40.0 36.0 41.0 33.0 41.0 31 37.690251974784665 40.0 36.0 41.0 33.0 41.0 32 37.605227598769 40.0 36.0 41.0 33.0 41.0 33 37.54886513128523 40.0 36.0 41.0 33.0 41.0 34 37.46564142553559 40.0 36.0 41.0 33.0 41.0 35 37.43627710678421 40.0 36.0 41.0 33.0 41.0 36 37.36607180061074 40.0 36.0 41.0 33.0 41.0 37 37.313129118475175 40.0 35.0 41.0 33.0 41.0 38 37.22625049853268 40.0 35.0 41.0 32.0 41.0 39 37.190921645544755 40.0 35.0 41.0 32.0 41.0 40 37.1141238027775 39.0 35.0 41.0 32.0 41.0 41 37.01248861559708 39.0 35.0 41.0 32.0 41.0 42 36.98191293684856 39.0 35.0 41.0 32.0 41.0 43 36.911796920109765 39.0 35.0 41.0 32.0 41.0 44 36.833740096313534 39.0 35.0 41.0 31.0 41.0 45 36.72445578089563 39.0 35.0 41.0 31.0 41.0 46 36.63356806533606 39.0 35.0 41.0 31.0 41.0 47 36.58290821641378 39.0 35.0 41.0 31.0 41.0 48 36.503643008934894 39.0 35.0 41.0 31.0 41.0 49 36.460673956652954 39.0 35.0 41.0 31.0 41.0 50 36.33092450280667 39.0 35.0 41.0 31.0 41.0 51 35.337400963135366 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 3.0 9 12.0 10 11.0 11 3.0 12 4.0 13 8.0 14 11.0 15 11.0 16 19.0 17 40.0 18 59.0 19 135.0 20 228.0 21 359.0 22 544.0 23 852.0 24 1279.0 25 1868.0 26 2529.0 27 2920.0 28 3241.0 29 3756.0 30 4567.0 31 5751.0 32 7421.0 33 10699.0 34 19656.0 35 26498.0 36 24109.0 37 36427.0 38 66469.0 39 116399.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.35449096093289 24.665611067127795 26.958861381128973 12.021036590810331 2 32.30491746679921 25.77518110873667 23.949807432452545 17.97009399201157 3 31.754299286279785 24.066776591881805 26.64218151946807 17.536742602370335 4 29.62831784657694 24.898954123088462 26.646348359753087 18.82637967058151 5 26.22906906835404 29.275326948146652 24.927526742185684 19.568077241313624 6 26.22103301923294 33.83146916835821 24.753709976010903 15.193787836397945 7 79.62504390063872 5.781788526902907 9.384914847642461 5.208252724815915 8 80.298583869566 5.480585500586334 8.809890888310823 5.41093974153685 9 73.95784348157363 8.008369396343895 10.97009994464055 7.063687177441917 10 40.08500354181424 24.303393593780694 19.680879560457875 15.93072330394719 11 30.408409874220947 25.95792681837934 23.78819355568387 19.845469751715843 12 28.281535540171316 21.650306858023846 28.83989213836291 21.22826546344193 13 24.621263981237313 24.899251754537392 30.190543653604614 20.28894061062068 14 20.393409249194907 27.965153309959344 29.52176578786021 22.119671652985538 15 20.124052787913783 26.816593548540713 33.0867952831368 19.97255838040871 16 22.707493764621145 25.52487306018703 30.72628026167757 21.041352913514253 17 21.99228539284375 26.288297726690995 27.4133446036442 24.30607227682106 18 23.312876131743586 26.393659259612008 28.673218526962437 21.620246081681973 19 24.30071491074033 28.866976600215484 26.500508949777668 20.33179953926652 20 24.754305238908763 27.129999464263392 28.1407558648277 19.974939432000145 21 22.67475430523891 28.18272189912675 28.50059228658337 20.641931509050973 22 21.722928931562624 25.64809248004381 28.0011667152798 24.62781187311376 23 21.690784735078246 26.301691141892817 28.415767323638484 23.591756799390453 24 22.01192906847309 25.507610436149125 29.4387266136089 23.041733881768884 25 21.307733060306084 27.89669807670558 26.805581184930325 23.989987678058014 26 20.741935675891256 28.492258606013344 27.82348074026894 22.942324977826456 27 22.55213014827999 27.304113861887103 27.804729958986385 22.339026030846522 28 19.08353324245653 27.05023423595031 30.019405570470198 23.846826951122964 29 20.46424553404011 25.17098926740995 28.743757180358703 25.621008018191233 30 23.039650461626376 25.973403653723665 26.886536939039125 24.10040894561083 31 22.630109587899497 26.95618269808861 25.96268892156221 24.451018792449688 32 22.266701588756675 26.849333007922947 25.752858750066963 25.13110665325341 33 23.764085408320586 26.877607995571246 25.40403469192169 23.954271904186484 34 20.511568934419884 26.226092753864744 27.050531867399236 26.21180644431613 35 21.948831201300052 25.354925502848335 26.245438798045157 26.45080449780646 36 22.610168280821224 27.23982546891835 26.95856374968005 23.19144250058038 37 21.229158357788716 27.189525754049278 28.646431696558782 22.93488419160322 38 21.374997767764135 27.50084824962945 26.595453381986157 24.528700600620265 39 22.859881066473008 24.536736649741357 27.727643413713665 24.875738870071967 40 22.461650187805443 25.439750465793214 27.301137547397808 24.797461799003532 41 19.419856779746773 27.05350818188853 27.793419963927068 25.733215074437627 42 21.362794878358027 26.036799152345637 28.722625347484716 23.877780621811624 43 22.646776949039545 24.21469942199973 29.272945896555214 23.865577732405516 44 21.462501413749383 25.06919931187609 27.19845469751716 26.26984457685737 45 22.734875857922653 24.2700588715006 25.625174858476246 27.369890412100506 46 23.021197311792754 26.08442018417434 25.88411421904484 25.01026828498806 47 20.850868786199424 25.04538879596174 29.071747037078925 25.031995380759913 48 20.618716256034478 24.31946569202288 29.682784401731027 25.379033650211618 49 21.718762091277615 23.02238783758847 30.34203806110969 24.916812010024227 50 20.03893019351997 23.053341508277132 29.56164840201675 27.346079896186147 51 20.38031346544201 23.58044680433113 27.095474216187583 28.943765514039278 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 240.0 1 452.0 2 664.0 3 1132.0 4 1600.0 5 1175.5 6 751.0 7 704.5 8 658.0 9 713.0 10 768.0 11 718.0 12 668.0 13 681.5 14 695.0 15 707.5 16 720.0 17 709.0 18 698.0 19 832.0 20 966.0 21 955.5 22 945.0 23 1127.5 24 1310.0 25 1631.0 26 2316.0 27 2680.0 28 3522.0 29 4364.0 30 4879.0 31 5394.0 32 6115.0 33 6836.0 34 7697.5 35 8559.0 36 9128.5 37 9698.0 38 10418.0 39 11138.0 40 12431.0 41 13724.0 42 15481.5 43 17239.0 44 18842.0 45 20445.0 46 22174.0 47 23903.0 48 27112.0 49 30321.0 50 32829.5 51 35338.0 52 34279.0 53 33220.0 54 28774.0 55 24328.0 56 21321.5 57 18315.0 58 16110.0 59 13905.0 60 13287.0 61 12669.0 62 11274.5 63 9880.0 64 8552.0 65 7224.0 66 5796.0 67 4368.0 68 3930.5 69 3493.0 70 2989.5 71 2486.0 72 2078.0 73 1670.0 74 1342.5 75 797.5 76 580.0 77 419.5 78 259.0 79 224.0 80 189.0 81 129.5 82 70.0 83 50.5 84 31.0 85 17.5 86 4.0 87 3.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 335986.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.71254286136972 #Duplication Level Percentage of deduplicated Percentage of total 1 74.7742931916191 29.694773233007993 2 10.337247814666812 8.210367938171125 3 3.570723531876948 4.254075339172943 4 1.805831164211084 2.8685659003651947 5 1.2422944084330874 2.4667334970669463 6 0.9137632028253179 2.1772716214405743 7 0.7068136622275613 1.9648557499349608 8 0.5955721884537202 1.89213488488065 9 0.5660613378547126 2.0231761627547606 >10 5.3823522981215834 39.3003585327598 >50 0.06499323147529498 1.749409301635619 >100 0.038542497735349346 2.903977423679233 >500 0.0015114704994254647 0.49430041513018774 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 883 0.26280856940467756 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 764 0.22739042698207662 No Hit GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 498 0.148220461566851 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 418 0.12440994565249744 No Hit CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 413 0.12292178840785033 No Hit CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGCT 402 0.1196478424696267 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 356 0.1059567958188734 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCC 346 0.10298048132957921 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12530283999928568 0.0 2 0.0 0.0 0.0 0.7107439000434542 0.0 3 0.0 0.0 0.0 1.1610602822736662 0.0 4 0.0 0.0 0.0 1.7973963200847654 0.0 5 0.0 0.0 0.0 3.434666920645503 0.0 6 0.0 0.0 0.0 4.484710672468496 0.0 7 0.0 0.0 0.0 5.394570011845731 0.0 8 0.0 0.0 0.0 6.782723089652545 0.0 9 0.0 0.0 0.0 7.2872083955879114 0.0 10 0.0 0.0 0.0 8.460173935818755 0.0 11 2.976314489294197E-4 0.0 0.0 10.33941890435911 0.0 12 2.976314489294197E-4 0.0 0.0 11.778764591381783 0.0 13 2.976314489294197E-4 0.0 0.0 12.332359086390504 0.0 14 2.976314489294197E-4 0.0 0.0 12.531176894275356 0.0 15 2.976314489294197E-4 0.0 0.0 12.928217247147202 0.0 16 2.976314489294197E-4 0.0 0.0 13.874685254742758 0.0 17 2.976314489294197E-4 0.0 0.0 14.994970028513093 0.0 18 2.976314489294197E-4 0.0 0.0 16.23668843344663 0.0 19 2.976314489294197E-4 0.0 0.0 16.975112058240523 0.0 20 5.952628978588394E-4 0.0 0.0 17.687344115528624 0.0 21 5.952628978588394E-4 0.0 0.0 18.564463995523624 0.0 22 5.952628978588394E-4 0.0 0.0 19.46450149708619 0.0 23 5.952628978588394E-4 0.0 0.0 20.466031322733684 0.0 24 5.952628978588394E-4 0.0 0.0 21.229455989237646 0.0 25 5.952628978588394E-4 0.0 0.0 21.898233854982053 0.0 26 5.952628978588394E-4 0.0 0.0 22.52147410904026 0.0 27 5.952628978588394E-4 0.0 0.0 23.145309625996322 0.0 28 5.952628978588394E-4 0.0 0.0 23.784919609745643 0.0 29 5.952628978588394E-4 0.0 0.0 24.502806664563405 0.0 30 5.952628978588394E-4 0.0 0.0 25.22932503140012 0.0 31 5.952628978588394E-4 0.0 0.0 25.917151309876008 0.0 32 5.952628978588394E-4 0.0 0.0 26.56658313144 0.0 33 5.952628978588394E-4 0.0 0.0 27.189228122600348 0.0 34 5.952628978588394E-4 0.0 0.0 27.786276809152763 0.0 35 5.952628978588394E-4 0.0 0.0 28.380646812664814 0.0 36 5.952628978588394E-4 0.0 0.0 29.004779961069808 0.0 37 8.92894346788259E-4 0.0 0.0 29.62831784657694 0.0 38 8.92894346788259E-4 0.0 0.0 30.246498366003344 0.0 39 8.92894346788259E-4 0.0 0.0 30.852773627472573 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCAACG 25 3.8848935E-5 45.0 1 GTCGAAC 20 7.026151E-4 45.0 20 GCGCGAC 55 1.8189894E-12 45.0 9 TTCACGG 20 7.026151E-4 45.0 2 CCAGCGC 20 7.026151E-4 45.0 42 TATTGCG 25 3.8848935E-5 45.0 1 TCGGAAA 25 3.8848935E-5 45.0 42 CGGATGG 20 7.026151E-4 45.0 2 TTGCGGT 20 7.026151E-4 45.0 12 CGAATAT 45 3.8380676E-10 45.0 14 TCATCGA 20 7.026151E-4 45.0 16 CCGGTAT 20 7.026151E-4 45.0 19 CGTCATA 20 7.026151E-4 45.0 38 TCCGGTA 20 7.026151E-4 45.0 18 GCCAATT 30 2.1608994E-6 44.999996 42 GGCGATA 140 0.0 41.785713 8 GCGATAC 60 3.6379788E-12 41.249996 9 CGTTTTT 580 0.0 41.12069 1 CCATCTA 55 6.002665E-11 40.909092 13 TAAGGGA 165 0.0 40.90909 4 >>END_MODULE