##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3550735_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 414091 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.156219285132977 31.0 31.0 33.0 28.0 34.0 2 31.142374502222943 31.0 31.0 34.0 28.0 34.0 3 30.980581562989777 31.0 31.0 34.0 27.0 34.0 4 34.8597916883004 35.0 35.0 37.0 32.0 37.0 5 34.84021869589051 35.0 35.0 37.0 33.0 37.0 6 35.011487813065244 36.0 35.0 37.0 32.0 37.0 7 35.449664445737774 37.0 35.0 37.0 33.0 37.0 8 34.99490933152375 37.0 35.0 37.0 32.0 37.0 9 36.798679517304166 39.0 37.0 39.0 32.0 39.0 10 36.28298127706229 37.0 35.0 39.0 32.0 39.0 11 36.66149228068227 38.0 35.0 39.0 32.0 39.0 12 36.812024410093436 39.0 35.0 39.0 33.0 39.0 13 36.82388895194534 39.0 37.0 39.0 33.0 39.0 14 37.85799498177937 40.0 37.0 41.0 33.0 41.0 15 38.02476750279528 40.0 37.0 41.0 33.0 41.0 16 38.03664170435967 40.0 37.0 41.0 33.0 41.0 17 37.91452361920447 39.0 37.0 41.0 33.0 41.0 18 37.92254118056176 39.0 37.0 41.0 33.0 41.0 19 37.82657435201441 39.0 37.0 41.0 33.0 41.0 20 37.84767599392404 39.0 37.0 41.0 33.0 41.0 21 37.873254912567525 39.0 37.0 41.0 33.0 41.0 22 37.99741361198384 40.0 37.0 41.0 33.0 41.0 23 38.02165224552091 40.0 37.0 41.0 34.0 41.0 24 38.00049989012077 40.0 37.0 41.0 33.0 41.0 25 37.64922927569061 39.0 36.0 41.0 33.0 41.0 26 37.70256779306964 39.0 36.0 41.0 33.0 41.0 27 37.743467015704276 40.0 36.0 41.0 33.0 41.0 28 37.65037636654745 40.0 36.0 41.0 33.0 41.0 29 37.620025549939506 40.0 36.0 41.0 33.0 41.0 30 37.40981330190707 40.0 36.0 41.0 32.0 41.0 31 37.393589814799164 39.0 36.0 41.0 32.0 41.0 32 37.389851506069924 40.0 36.0 41.0 33.0 41.0 33 37.413153147496566 40.0 36.0 41.0 33.0 41.0 34 37.27731585569356 40.0 36.0 41.0 32.0 41.0 35 37.32375009357847 40.0 36.0 41.0 32.0 41.0 36 37.23554725893584 40.0 36.0 41.0 32.0 41.0 37 37.25839489387598 40.0 36.0 41.0 32.0 41.0 38 37.06981798686762 39.0 35.0 41.0 32.0 41.0 39 36.99188101166169 39.0 35.0 41.0 31.0 41.0 40 36.889364898053806 39.0 35.0 41.0 31.0 41.0 41 36.7005247638804 39.0 35.0 41.0 31.0 41.0 42 36.83243779748896 39.0 35.0 41.0 31.0 41.0 43 36.80204592710298 39.0 35.0 41.0 31.0 41.0 44 36.84717368887515 39.0 35.0 41.0 31.0 41.0 45 36.833604207770755 39.0 35.0 41.0 31.0 41.0 46 36.70893112866496 39.0 35.0 41.0 31.0 41.0 47 36.62777022441927 39.0 35.0 41.0 31.0 41.0 48 36.58256035509103 39.0 35.0 41.0 31.0 41.0 49 36.57036738301485 39.0 35.0 41.0 31.0 41.0 50 36.44061329514527 39.0 35.0 41.0 31.0 41.0 51 35.266238580408654 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 19.0 10 12.0 11 21.0 12 13.0 13 4.0 14 15.0 15 24.0 16 41.0 17 63.0 18 124.0 19 248.0 20 389.0 21 776.0 22 1225.0 23 1640.0 24 2069.0 25 2434.0 26 3068.0 27 3406.0 28 4114.0 29 4897.0 30 6328.0 31 8112.0 32 11067.0 33 15767.0 34 26695.0 35 29824.0 36 34231.0 37 53124.0 38 95725.0 39 108587.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.35432549850154 20.167306220130357 21.686537500211305 10.791830781156799 2 32.95459210656595 27.177118073080553 23.226537162121367 16.64175265823213 3 32.827808380283564 26.43694260440338 24.48423172684265 16.25101728847041 4 29.13031193626522 24.234286666457372 27.463045562448833 19.172355834828576 5 27.02908297934512 29.551958385958642 23.474791772822883 19.944166861873356 6 24.180675262200822 37.329234395338226 23.926383331200146 14.56370701126081 7 74.64397922195846 6.686452977727118 13.388844481044021 5.280723319270402 8 72.74777766239788 10.155497221625199 10.639690309617935 6.457034806358989 9 65.62277373813968 9.321622541905041 13.247571186043647 11.808032533911629 10 38.15658876913528 24.720170204133872 21.34796457783434 15.7752764488965 11 30.17887372582355 26.039203943094634 24.278479851047233 19.503442480034582 12 26.988512186934756 21.948798694006875 29.618610402061385 21.44407871699699 13 25.229961530195055 23.40403437891671 31.846864578075834 19.5191395128124 14 20.179622353540648 29.42831406623182 28.27059752566465 22.121466054562884 15 18.217734749125192 25.75786481715372 35.41612833893999 20.6082720947811 16 20.396241405874555 26.40409958197594 30.326184341123085 22.87347467102642 17 20.49935883658423 26.497074314583024 29.611607110514353 23.391959738318388 18 21.53657046398014 25.908073346196854 29.966843036917005 22.588513152906003 19 22.60783257786332 27.733759004663227 27.281201475038095 22.37720694243536 20 24.733210815980062 26.82308961073774 28.98928013407681 19.45441943920539 21 22.609523027547084 28.740542537751363 28.69369293222987 19.956241502471677 22 20.137844097070452 25.04521952904072 29.188270211137162 25.628666162751667 23 21.196790077543344 27.81248566136429 29.080322924188163 21.910401336904208 24 21.981400223622344 25.803748451427346 28.303440548092084 23.911410776858226 25 20.71501191767027 29.27182672407756 26.13797450318891 23.87518685506326 26 19.691565380556447 27.77167337614196 28.87046567058931 23.66629557271228 27 23.068842355907275 27.340608706781843 26.643418958634697 22.947129978676184 28 19.392114293718045 28.135844536587367 29.112924453803636 23.359116715890952 29 20.824891147115007 28.653605125443445 27.56133313691918 22.96017059052237 30 22.51316739557247 26.94262855266113 27.315493454337332 23.228710597429068 31 23.389061824574792 27.716130029389674 25.188183273724857 23.706624872310673 32 23.67233289301144 30.210509284191154 24.334747676235416 21.782410146561986 33 24.155077024132375 25.850115071324904 25.533035009212952 24.46177289532977 34 22.246800823973476 26.98464830194329 28.10565793509156 22.66289293899167 35 21.063727538149827 25.731783593461337 26.717557251908396 26.486931616480437 36 22.788469201214227 27.884933504954223 27.234351869516605 22.092245424314946 37 20.95408980151706 27.688116863201568 28.01195872404858 23.345834611232796 38 23.067393399035478 26.559862445694304 25.60427538874305 24.768468766527164 39 23.045417553146528 25.266668437613955 29.095053985718117 22.5928600235214 40 23.245856587078688 23.083814910249195 30.155448923062806 23.514879579609314 41 19.196263623213255 25.67744771076889 29.986162461874322 25.14012620414353 42 20.866669403585203 25.146646510066628 29.12548208002589 24.86120200632228 43 22.92032427654791 24.90829310465574 28.690795018486277 23.480587600310077 44 21.796899715279974 25.10124586141694 28.314307724630577 24.787546698672514 45 21.956767956801766 23.70903980043034 27.153451777507843 27.18074046526005 46 23.582256074147953 26.074461893641736 27.035361792456246 23.30792023975406 47 20.032311738241113 25.006097693502156 31.66333004098133 23.298260527275406 48 20.881400465115156 24.906602654971973 28.419598590647947 25.792398289264916 49 21.26634000738968 23.503770910258854 31.615997449835902 23.613891632515557 50 20.960851600252116 23.04879845251406 30.088072428524164 25.902277518709653 51 19.93981999125796 23.040346204095236 27.99746915533059 29.022364649316213 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 157.0 1 440.5 2 724.0 3 1424.5 4 2125.0 5 1460.5 6 796.0 7 775.5 8 755.0 9 725.0 10 695.0 11 708.5 12 722.0 13 680.0 14 638.0 15 658.5 16 679.0 17 743.5 18 808.0 19 993.5 20 1179.0 21 1298.5 22 1418.0 23 1587.0 24 1756.0 25 2134.5 26 3057.0 27 3601.0 28 4194.5 29 4788.0 30 6295.0 31 7802.0 32 8237.0 33 8672.0 34 10077.5 35 11483.0 36 12103.0 37 12723.0 38 13597.5 39 14472.0 40 15912.5 41 17353.0 42 19632.5 43 21912.0 44 24322.0 45 26732.0 46 37612.0 47 48492.0 48 46090.0 49 43688.0 50 42440.0 51 41192.0 52 35630.0 53 30068.0 54 26464.5 55 22861.0 56 20459.5 57 18058.0 58 16703.5 59 15349.0 60 15378.5 61 15408.0 62 13888.0 63 12368.0 64 10238.5 65 8109.0 66 6476.0 67 4843.0 68 4142.5 69 3442.0 70 2931.5 71 2421.0 72 1817.5 73 1214.0 74 1020.5 75 720.0 76 613.0 77 464.5 78 316.0 79 227.5 80 139.0 81 112.0 82 85.0 83 70.5 84 56.0 85 37.5 86 19.0 87 17.0 88 15.0 89 8.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 414091.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.391959172010395 #Duplication Level Percentage of deduplicated Percentage of total 1 72.5215365072629 25.666792591565102 2 10.785297872659157 7.63425643934247 3 3.7603428937758103 3.992577065078187 4 1.9673176315983496 2.7850890118361993 5 1.2683203065158382 2.244417025262013 6 0.9809499245257576 2.0830643807161375 7 0.8239362828355156 2.0412503497716803 8 0.7038537996452723 1.992861195208789 9 0.651201342917917 2.0742562207178334 >10 6.427705443087615 40.872435894157 >50 0.06613614803068932 1.6401882471852796 >100 0.0351348286413037 2.154895752731307 >500 0.004133509251918082 1.0518466029964764 >1k 0.004133509251918082 3.7660692234315194 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGC 4003 0.9666957263017066 No Hit GAATCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC 3729 0.9005266958228989 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCG 3252 0.7853346245149013 No Hit GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC 2190 0.5288692582065294 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1265 0.30548840713756154 No Hit CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC 1007 0.24318326165021698 No Hit CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGCT 871 0.21034023922277953 No Hit GAATGACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCT 762 0.18401752271843627 No Hit GAACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT 737 0.17798020241927498 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACGAGTCTT 708 0.17097691087224787 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACGAGTCTTCGTA 622 0.15020852904313303 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTC 614 0.14827658654740142 No Hit TCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC 454 0.10963773663276913 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.414928119664518E-4 0.0 0.0 0.2175850235817731 0.0 2 2.414928119664518E-4 0.0 0.0 1.2231610926100784 0.0 3 2.414928119664518E-4 0.0 0.0 1.598682415217911 0.0 4 2.414928119664518E-4 0.0 0.0 2.2813825946470705 0.0 5 2.414928119664518E-4 0.0 0.0 4.534993515917999 0.0 6 2.414928119664518E-4 0.0 0.0 5.427792441757971 0.0 7 2.414928119664518E-4 0.0 0.0 6.411634157709296 0.0 8 2.414928119664518E-4 0.0 0.0 7.8461014607900195 0.0 9 2.414928119664518E-4 0.0 0.0 8.311458109449372 0.0 10 2.414928119664518E-4 0.0 0.0 10.166122905351722 0.0 11 2.414928119664518E-4 0.0 0.0 11.73993156093709 0.0 12 2.414928119664518E-4 0.0 0.0 13.995232931891783 0.0 13 2.414928119664518E-4 0.0 0.0 14.597274512124146 0.0 14 2.414928119664518E-4 0.0 0.0 14.855188835304316 0.0 15 2.414928119664518E-4 0.0 0.0 15.443948310878527 0.0 16 2.414928119664518E-4 0.0 0.0 16.3727296657015 0.0 17 2.414928119664518E-4 0.0 0.0 17.34401375543057 0.0 18 2.414928119664518E-4 0.0 0.0 18.39426599467267 0.0 19 2.414928119664518E-4 0.0 0.0 19.19795407289702 0.0 20 2.414928119664518E-4 0.0 0.0 19.84443033053121 0.0 21 2.414928119664518E-4 0.0 0.0 20.643530045328202 0.0 22 2.414928119664518E-4 0.0 0.0 21.49092832251848 0.0 23 2.414928119664518E-4 0.0 0.0 22.26491278487096 0.0 24 2.414928119664518E-4 0.0 0.0 22.88554931162474 0.0 25 2.414928119664518E-4 0.0 0.0 23.41755797638683 0.0 26 2.414928119664518E-4 0.0 0.0 23.920346010900985 0.0 27 2.414928119664518E-4 0.0 0.0 24.463463345013537 0.0 28 2.414928119664518E-4 0.0 0.0 25.00778814318592 0.0 29 2.414928119664518E-4 0.0 0.0 25.56370459633269 0.0 30 2.414928119664518E-4 0.0 0.0 26.17830380278731 0.0 31 2.414928119664518E-4 0.0 0.0 26.74315548997684 0.0 32 2.414928119664518E-4 0.0 0.0 27.29110268032872 0.0 33 2.414928119664518E-4 0.0 0.0 27.853056453774652 0.0 34 2.414928119664518E-4 0.0 0.0 28.400279165690634 0.0 35 2.414928119664518E-4 0.0 0.0 28.969719216307528 0.0 36 2.414928119664518E-4 0.0 0.0 29.550267936274878 0.0 37 2.414928119664518E-4 0.0 0.0 30.09531721288316 0.0 38 2.414928119664518E-4 0.0 0.0 30.64592082416667 0.0 39 2.414928119664518E-4 0.0 0.0 31.224054616014353 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACGG 45 3.8380676E-10 45.000004 2 GATCCGC 25 3.8864688E-5 45.0 17 TCTTACG 20 7.0280524E-4 45.0 37 GCCGCAT 25 3.8864688E-5 45.0 19 TGGCACG 20 7.0280524E-4 45.0 1 GTTAACG 20 7.0280524E-4 45.0 1 CTCGAAT 25 3.8864688E-5 45.0 43 CATCGCC 25 3.8864688E-5 45.0 23 ATACGGA 20 7.0280524E-4 45.0 28 ATCGCCA 25 3.8864688E-5 45.0 24 AGTCGAG 20 7.0280524E-4 45.0 1 ATATGCG 30 2.1621254E-6 44.999996 1 TCGGACG 30 2.1621254E-6 44.999996 1 CTATTGG 30 2.1621254E-6 44.999996 2 TAAGGGT 85 0.0 42.35294 4 TATGCGG 75 0.0 42.0 2 CGAATAT 75 0.0 42.0 14 TACGGCT 465 0.0 41.6129 7 CGACGGT 65 0.0 41.53846 28 CGGTCTA 65 0.0 41.53846 31 >>END_MODULE