##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3550722_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 438989 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80337776117397 33.0 31.0 34.0 30.0 34.0 2 31.84659524498336 33.0 31.0 34.0 30.0 34.0 3 31.93464073131673 33.0 31.0 34.0 30.0 34.0 4 35.676741330648376 37.0 35.0 37.0 33.0 37.0 5 35.68343398126149 37.0 35.0 37.0 35.0 37.0 6 35.625225233434094 37.0 35.0 37.0 33.0 37.0 7 35.887031337915076 37.0 35.0 37.0 35.0 37.0 8 35.632633163928936 37.0 35.0 37.0 33.0 37.0 9 37.45990901822141 39.0 37.0 39.0 35.0 39.0 10 36.904717430277294 39.0 37.0 39.0 32.0 39.0 11 36.8879812478217 39.0 37.0 39.0 33.0 39.0 12 36.89387433398103 39.0 37.0 39.0 33.0 39.0 13 36.79373515053908 39.0 35.0 39.0 33.0 39.0 14 37.87676228789332 40.0 37.0 41.0 33.0 41.0 15 37.92462225704972 40.0 37.0 41.0 33.0 41.0 16 37.94210333288533 40.0 37.0 41.0 33.0 41.0 17 37.85759096469388 40.0 36.0 41.0 33.0 41.0 18 37.822806494012376 39.0 36.0 41.0 33.0 41.0 19 37.727872452384915 39.0 36.0 41.0 33.0 41.0 20 37.70789473084747 39.0 36.0 41.0 33.0 41.0 21 37.75565674766338 39.0 36.0 41.0 33.0 41.0 22 37.83027137354239 40.0 36.0 41.0 33.0 41.0 23 37.80564888869653 40.0 36.0 41.0 33.0 41.0 24 37.79380348938128 40.0 36.0 41.0 33.0 41.0 25 37.602274772260806 39.0 36.0 41.0 33.0 41.0 26 37.60228844002925 39.0 36.0 41.0 33.0 41.0 27 37.58774137848557 40.0 36.0 41.0 33.0 41.0 28 37.48741084628544 40.0 36.0 41.0 33.0 41.0 29 37.42933877614245 40.0 36.0 41.0 33.0 41.0 30 37.33468720172943 39.0 36.0 41.0 32.0 41.0 31 37.35312274339448 39.0 36.0 41.0 32.0 41.0 32 37.25261680816604 39.0 36.0 41.0 32.0 41.0 33 37.147131249302376 39.0 35.0 41.0 32.0 41.0 34 37.091703892352655 39.0 35.0 41.0 32.0 41.0 35 37.02334454849666 39.0 35.0 41.0 32.0 41.0 36 36.960122007612945 39.0 35.0 41.0 31.0 41.0 37 36.88404493051079 39.0 35.0 41.0 31.0 41.0 38 36.807958741563 39.0 35.0 41.0 31.0 41.0 39 36.725874680231165 39.0 35.0 41.0 31.0 41.0 40 36.60913143609521 39.0 35.0 41.0 31.0 41.0 41 36.509994555672236 39.0 35.0 41.0 30.0 41.0 42 36.556610757900536 39.0 35.0 41.0 31.0 41.0 43 36.47350161393565 39.0 35.0 41.0 31.0 41.0 44 36.33513823808797 39.0 35.0 41.0 30.0 41.0 45 36.3595147031019 39.0 35.0 41.0 30.0 41.0 46 36.21784600525298 39.0 35.0 41.0 30.0 41.0 47 36.11700520969774 39.0 35.0 40.0 30.0 41.0 48 36.03184362250535 38.0 35.0 40.0 30.0 41.0 49 35.998198132527236 38.0 35.0 40.0 29.0 41.0 50 35.86563672438262 38.0 35.0 40.0 29.0 41.0 51 34.653503846337834 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 4.0 10 4.0 11 5.0 12 7.0 13 10.0 14 12.0 15 19.0 16 32.0 17 69.0 18 125.0 19 298.0 20 448.0 21 957.0 22 1392.0 23 1813.0 24 2303.0 25 2851.0 26 3733.0 27 4398.0 28 4807.0 29 5571.0 30 6846.0 31 8801.0 32 12030.0 33 16419.0 34 27993.0 35 34080.0 36 34744.0 37 51943.0 38 91431.0 39 125792.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.23530202351312 20.37590919134648 23.78055030991665 10.608238475223752 2 29.852000847401644 30.34996321092328 23.595807639826965 16.20222830184811 3 29.94220811911005 29.12054743968528 25.382412771162834 15.554831670041846 4 27.80889726166259 24.037732152741867 30.629241279394243 17.524129306201296 5 28.768374606197423 28.59365496629756 23.14408789286292 19.493882534642097 6 25.376945663786564 37.13942718382465 23.289421830615346 14.19420532177344 7 76.18596365740372 6.024068940224014 13.30056106189449 4.48940634047778 8 76.15794473210035 10.318253988140933 8.701129185469341 4.822672094289379 9 69.77099653977662 8.90386775067257 10.012779363492024 11.312356346058786 10 39.19232600361285 29.462013854561274 17.016371708630512 14.329288433195364 11 31.185291658788717 24.85916503602596 25.183546740351126 18.771996564834197 12 28.337384308035052 21.676397358475953 28.683862238005965 21.30235609548303 13 25.97103799867423 23.748203257940403 31.087339318297268 19.193419425088102 14 20.650631337003887 30.388688554838506 26.804771873554916 22.155908234602688 15 18.223235661941413 27.066509639193693 34.07784705311523 20.632407645749666 16 20.860887174849484 26.117283120989367 29.63468332919504 23.387146374966115 17 20.38638781381766 26.712286640439736 29.135354188829332 23.76597135691327 18 21.721273198189476 26.348723999917993 28.734205185095753 23.195797616796774 19 23.411976154299992 27.93782987728622 25.925934362820023 22.724259605593762 20 25.947802792325092 25.98425017483354 28.87953912284818 19.188407909993188 21 24.397877851153446 29.306656886619027 26.48972981099754 19.805735451229985 22 22.050666417609552 25.389474451523842 27.989767397360755 24.57009173350585 23 23.068231778017218 28.47451758472308 27.505017209998428 20.952233427261273 24 22.9094578679648 25.804519019838768 27.45376307834593 23.832260033850506 25 21.38345152156432 30.939727419138062 25.44437332142719 22.232447737870427 26 20.89209524612234 28.241482132809704 27.12231969365975 23.744102927408203 27 23.505828164259242 28.903457717619347 25.486743403593255 22.103970714528153 28 19.765643330470695 29.367706252320673 29.009838515315874 21.85681190189276 29 21.84428311415548 28.20526254644194 27.848989382421884 22.1014649569807 30 21.11419648328318 31.152716810671794 26.816845069010842 20.916241637034187 31 24.188988790151917 27.520051755283166 24.259150001480677 24.031809453084247 32 24.229536503192563 29.960887402645625 25.48036511165428 20.329210982507533 33 23.360038634225457 28.85789848948379 24.136595677796027 23.645467198494725 34 22.844991560152987 28.32417213187574 25.21475481162398 23.616081496347288 35 21.218299319572928 27.59408550100344 25.10882960620881 26.07878557321482 36 23.598768989655778 31.00829405748208 23.813580750314927 21.579356202547217 37 21.675941766194597 29.427388841178253 27.63713897159154 21.259530421035606 38 22.153402477055234 28.957673199100658 24.908141206271683 23.98078311757242 39 23.19329185924932 26.009991138730125 27.100223468014008 23.696493534006546 40 21.641088956670895 27.100223468014008 28.213235411365662 23.045452163949438 41 21.724234548018288 26.66900537371096 25.80816375808961 25.798596320181144 42 21.32604689411352 26.464672235522986 27.65718503197119 24.552095838392308 43 24.45186553649408 26.885411707354855 25.127053297463036 23.53566945868803 44 22.689634592210737 26.722309670629564 26.907052340719247 23.68100339644046 45 21.7579483768386 25.38264056730351 26.11158821747242 26.74782283838547 46 23.870301989343695 28.21733574189786 24.991970186041108 22.920392082717335 47 20.925353482661297 26.274462458057034 30.329005965980926 22.471178093300743 48 21.852939367501236 26.04552733667586 26.976757959766644 25.124775336056253 49 20.697101749702156 25.525924339789835 29.924667816277857 23.85230609423015 50 21.067042682162878 25.24368492149006 28.33989006558251 25.349382330764552 51 20.210301397073728 24.853697928649694 26.34690163079257 28.589099043484005 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 445.0 2 702.0 3 1489.0 4 2276.0 5 1611.5 6 947.0 7 948.0 8 949.0 9 916.5 10 884.0 11 924.0 12 964.0 13 1004.5 14 1045.0 15 1018.0 16 991.0 17 1013.5 18 1036.0 19 1032.0 20 1028.0 21 1169.0 22 1310.0 23 1390.5 24 1471.0 25 2187.5 26 3153.5 27 3403.0 28 4275.5 29 5148.0 30 6208.0 31 7268.0 32 8130.5 33 8993.0 34 10358.0 35 11723.0 36 12417.5 37 13112.0 38 14806.0 39 16500.0 40 18235.0 41 19970.0 42 22374.5 43 24779.0 44 27179.0 45 29579.0 46 42807.0 47 56035.0 48 48358.5 49 40682.0 50 39119.0 51 37556.0 52 33070.5 53 28585.0 54 25950.5 55 23316.0 56 21374.5 57 19433.0 58 19240.5 59 19048.0 60 18924.5 61 18801.0 62 16390.5 63 13980.0 64 11513.5 65 9047.0 66 7358.0 67 5669.0 68 4643.0 69 3617.0 70 3107.5 71 2598.0 72 2146.5 73 1695.0 74 1302.5 75 676.5 76 443.0 77 317.5 78 192.0 79 159.5 80 127.0 81 90.5 82 54.0 83 33.5 84 13.0 85 8.5 86 4.0 87 5.5 88 7.0 89 5.0 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 438989.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.726393519436684 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17656507577256 24.275314585898368 2 8.376007594852084 5.482330413418395 3 3.1467589110627374 3.0894621130269964 4 1.8557155591609715 2.429235105969738 5 1.3385126813168815 2.190234636976631 6 1.061732762563432 2.0848010520077707 7 0.9686862067881056 2.219112420013857 8 0.8038017146918468 2.104442498128268 9 0.7456086392838414 2.196097356662524 >10 7.400970929995208 44.12063863412956 >50 0.07887395261051112 1.6906110925303075 >100 0.03699397777307159 2.109095016529162 >500 0.005583996644991938 1.4023323195572974 >1k 0.0020939987418719767 0.8945322305565038 >5k 0.0020939987418719767 3.711760524594645 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 5694 1.2970712250193057 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 5530 1.259712657948149 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 5025 1.1446756069058677 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 1722 0.3922649542471452 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1183 0.26948283442181925 No Hit GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT 1011 0.23030189822524028 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT 995 0.2266571599743957 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT 876 0.19954941923373934 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 798 0.18178132026087215 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC 785 0.17881997043206094 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA 738 0.16811355182020504 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT 729 0.166063386554105 No Hit CCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 615 0.14009462651683754 No Hit CTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGCT 603 0.13736107282870413 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.5559228135556927E-4 0.0 0.0 0.15171222969140458 0.0 2 4.5559228135556927E-4 0.0 0.0 0.8767873454687931 0.0 3 6.83388422033354E-4 0.0 0.0 1.1717833476465243 0.0 4 6.83388422033354E-4 0.0 0.0 1.7469686028579303 0.0 5 6.83388422033354E-4 0.0 0.0 3.8283419402308487 0.0 6 6.83388422033354E-4 0.0 0.0 4.593053584486172 0.0 7 6.83388422033354E-4 0.0 0.0 5.369382831916061 0.0 8 6.83388422033354E-4 0.0 0.0 6.351639790518669 0.0 9 6.83388422033354E-4 0.0 0.0 6.668732018342145 0.0 10 6.83388422033354E-4 0.0 0.0 8.675160425432072 0.0 11 6.83388422033354E-4 0.0 0.0 9.681563774946525 0.0 12 6.83388422033354E-4 0.0 0.0 11.814191243971944 0.0 13 6.83388422033354E-4 0.0 0.0 12.219896170519078 0.0 14 6.83388422033354E-4 0.0 0.0 12.406689005874863 0.0 15 6.83388422033354E-4 0.0 0.0 12.81216613628132 0.0 16 6.83388422033354E-4 0.0 0.0 13.35796568934529 0.0 17 6.83388422033354E-4 0.0 0.0 13.98121593023971 0.0 18 6.83388422033354E-4 0.0 0.0 14.647291845581552 0.0 19 6.83388422033354E-4 0.0 0.0 15.255507541191237 0.0 20 6.83388422033354E-4 0.0 0.0 15.712694395531551 0.0 21 6.83388422033354E-4 0.0 0.0 16.199950340441333 0.0 22 6.83388422033354E-4 0.0 0.0 16.76579595388495 0.0 23 6.83388422033354E-4 0.0 0.0 17.312278895370955 0.0 24 6.83388422033354E-4 0.0 0.0 17.732334978780788 0.0 25 6.83388422033354E-4 0.0 0.0 18.120271806355056 0.0 26 6.83388422033354E-4 0.0 0.0 18.489757146534423 0.0 27 6.83388422033354E-4 0.0 0.0 18.893867500096814 0.0 28 6.83388422033354E-4 0.0 0.0 19.266769782386348 0.0 29 6.83388422033354E-4 0.0 0.0 19.650378483287735 0.0 30 6.83388422033354E-4 0.0 0.0 20.123283271334817 0.0 31 6.83388422033354E-4 0.0 0.0 20.526710236475175 0.0 32 6.83388422033354E-4 0.0 0.0 20.91988637528503 0.0 33 6.83388422033354E-4 0.0 0.0 21.285271384932198 0.0 34 6.83388422033354E-4 0.0 0.0 21.662957386175965 0.0 35 6.83388422033354E-4 0.0 0.0 22.091897519072234 0.0 36 6.83388422033354E-4 0.0 0.0 22.51969867126511 0.0 37 6.83388422033354E-4 0.0 0.0 22.93223748203258 0.0 38 6.83388422033354E-4 0.0 0.0 23.317440755918714 0.0 39 9.111845627111385E-4 0.0 0.0 23.719273148074326 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 65 0.0 45.000004 31 CTCGTAT 20 7.0285174E-4 45.0 43 CGCGGGT 20 7.0285174E-4 45.0 4 GGGTACG 50 2.1827873E-11 45.0 7 TACGGTT 25 3.8868522E-5 45.0 33 TACGGAT 20 7.0285174E-4 45.0 18 TAACGCC 25 3.8868522E-5 45.0 12 TCTCGTA 25 3.8868522E-5 45.0 28 CGGGCTA 25 3.8868522E-5 45.0 6 GACGGGC 40 6.7993824E-9 45.0 4 TCGTACG 25 3.8868522E-5 45.0 30 ATAACGC 25 3.8868522E-5 45.0 11 TCGAGAG 20 7.0285174E-4 45.0 1 AGGGCGC 25 3.8868522E-5 45.0 6 TCGAAAG 20 7.0285174E-4 45.0 1 TACGGCT 665 0.0 42.969925 7 ACGGCTG 705 0.0 40.531918 8 CATGCGG 45 1.9235813E-8 40.0 2 TATACTC 45 1.9235813E-8 40.0 43 CGGCTGT 725 0.0 39.724136 9 >>END_MODULE