SRR3550595_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3550595_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	575747
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1941	0.3371272451267658	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTACGG	20	7.03035E-4	45.0	2
CGCATCG	55	1.8189894E-12	45.0	21
TTATACG	20	7.03035E-4	45.0	1
AATTGCG	25	3.888372E-5	45.0	1
TTGCGTA	20	7.03035E-4	45.0	45
CGGTCTA	55	1.8189894E-12	45.0	31
CGGTAGA	20	7.03035E-4	45.0	24
CGATACG	20	7.03035E-4	45.0	10
CGTATGG	30	2.1636079E-6	44.999996	2
CGACGGT	60	3.6379788E-12	41.249996	28
CACGACG	60	3.6379788E-12	41.249996	26
TAACGCC	60	3.6379788E-12	41.249996	12
ATAACGC	60	3.6379788E-12	41.249996	11
TACACGG	60	3.6379788E-12	41.249996	2
ACGGTCT	60	3.6379788E-12	41.249996	30
TCGTTAG	55	6.002665E-11	40.909092	1
TCGTACG	55	6.002665E-11	40.909092	30
ATAGCGG	140	0.0	40.178574	2
TCGTAAG	45	1.9254003E-8	40.000004	1
TATAGCG	40	3.4542063E-7	39.375	1