SRR3550282_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3550282_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	786896
Sequences flagged as poor quality	0
Sequence length	51
%GC	32

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	56376	7.164352087188142	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1154	0.14665216242044693	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	1079	0.1371210426790834	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	1079	0.1371210426790834	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA	922	0.11716923202049571	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAA	888	0.11284845773774424	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGGCG	30	2.1646247E-6	45.000004	1
CTACTCC	30	2.1646247E-6	45.000004	24
GCGATAT	20	7.031927E-4	45.000004	9
TATAGCG	30	2.1646247E-6	45.000004	1
ACCGTTG	20	7.031927E-4	45.000004	16
TACGGGT	25	3.8896804E-5	45.0	4
ACGGGTA	25	3.8896804E-5	45.0	5
CGTTTTT	33965	0.0	44.516415	1
GGCGATA	95	0.0	42.63158	8
GTTTTTT	37380	0.0	40.76846	2
TAACGTC	115	0.0	39.130432	32
TCGTACG	70	0.0	38.571426	30
GACCGAT	135	0.0	38.333332	9
ACGTGCG	30	1.1395945E-4	37.500004	1
ATAACGT	120	0.0	37.500004	31
CACAACG	60	1.546141E-10	37.500004	12
AATAACG	120	0.0	37.500004	30
CGAATAT	55	2.746674E-9	36.81818	14
TAACGGG	135	0.0	36.666664	3
CTCGTAC	75	1.8189894E-12	36.0	29