##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3550124_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 432065 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.739323944313934 31.0 31.0 34.0 30.0 34.0 2 31.845074236515337 33.0 31.0 34.0 30.0 34.0 3 31.856514644787243 33.0 31.0 34.0 30.0 34.0 4 35.63396248249685 37.0 35.0 37.0 33.0 37.0 5 33.07307928205247 37.0 35.0 37.0 28.0 37.0 6 34.09754087926585 37.0 35.0 37.0 28.0 37.0 7 35.36204506266418 37.0 35.0 37.0 32.0 37.0 8 35.224197748024025 37.0 35.0 37.0 32.0 37.0 9 37.32356242694965 39.0 37.0 39.0 34.0 39.0 10 36.882654230266276 39.0 37.0 39.0 32.0 39.0 11 36.75010241514587 39.0 37.0 39.0 32.0 39.0 12 37.109638596044576 39.0 37.0 39.0 34.0 39.0 13 37.080941525002025 39.0 37.0 39.0 33.0 39.0 14 38.104417159455174 40.0 37.0 41.0 33.0 41.0 15 38.20364991378612 40.0 38.0 41.0 33.0 41.0 16 38.223440917454546 40.0 38.0 41.0 33.0 41.0 17 38.08133035538634 40.0 37.0 41.0 33.0 41.0 18 37.97387661578698 39.0 37.0 41.0 33.0 41.0 19 37.7361091502436 39.0 37.0 41.0 33.0 41.0 20 37.39271868816034 39.0 35.0 41.0 33.0 41.0 21 37.393959242243646 39.0 35.0 40.0 33.0 41.0 22 37.387485679238075 39.0 35.0 40.0 33.0 41.0 23 37.06653397058313 39.0 35.0 40.0 32.0 41.0 24 36.85614895906866 39.0 35.0 40.0 32.0 41.0 25 36.6674643861456 38.0 35.0 40.0 31.0 41.0 26 36.92700866767732 39.0 35.0 40.0 32.0 41.0 27 36.793375996667166 39.0 35.0 40.0 32.0 41.0 28 36.85077939661856 39.0 35.0 40.0 32.0 41.0 29 36.95551132352771 39.0 35.0 40.0 33.0 41.0 30 36.693502135095414 39.0 35.0 40.0 32.0 41.0 31 36.50895582840545 39.0 35.0 40.0 31.0 41.0 32 36.1643248122389 39.0 35.0 40.0 30.0 41.0 33 35.95094719544513 39.0 35.0 40.0 29.0 41.0 34 35.720391607744205 39.0 35.0 40.0 27.0 41.0 35 35.497402011271454 39.0 35.0 40.0 24.0 41.0 36 35.298637936421606 39.0 35.0 40.0 23.0 41.0 37 35.166183328897276 39.0 35.0 40.0 23.0 41.0 38 35.06074317521669 39.0 35.0 40.0 22.0 41.0 39 34.990617152511774 39.0 35.0 40.0 21.0 41.0 40 34.8778563410598 38.0 35.0 40.0 21.0 41.0 41 34.76875007232708 38.0 35.0 40.0 21.0 41.0 42 34.776214227026024 38.0 35.0 40.0 20.0 41.0 43 34.68031430456065 38.0 35.0 40.0 18.0 41.0 44 34.649089836020046 38.0 35.0 40.0 18.0 41.0 45 34.65760012961013 38.0 35.0 40.0 20.0 41.0 46 34.53113767604411 38.0 35.0 40.0 20.0 41.0 47 34.4205478342379 38.0 34.0 40.0 18.0 41.0 48 34.37065256385035 38.0 34.0 40.0 18.0 41.0 49 34.385208244129934 38.0 34.0 40.0 18.0 41.0 50 34.29326143057179 38.0 34.0 40.0 18.0 41.0 51 33.40324025320265 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 8.0 11 8.0 12 17.0 13 24.0 14 18.0 15 43.0 16 76.0 17 110.0 18 221.0 19 440.0 20 821.0 21 1512.0 22 2382.0 23 3442.0 24 4482.0 25 5931.0 26 7932.0 27 8464.0 28 8360.0 29 7975.0 30 8556.0 31 9655.0 32 11957.0 33 15751.0 34 23641.0 35 35245.0 36 44340.0 37 56891.0 38 89059.0 39 84680.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.38921227130177 19.764850196151045 21.700670038072975 19.14526749447421 2 35.25395484475716 28.18904562970849 22.561188710032056 13.995810815502296 3 25.58041035492345 28.57648733408168 34.2524851584831 11.590617152511774 4 22.404499323018527 24.06003726291183 39.385740571441794 14.149722842627845 5 22.12051427447259 31.19114022195734 31.94079594505456 14.747549558515502 6 18.844849733257725 35.66037517503153 33.67340562183931 11.821369469871431 7 59.71439482485275 9.01669887632648 26.47888627868492 4.790020020135859 8 58.015113466723754 12.477057850092 23.13101038038258 6.376818302801662 9 52.87676622730376 11.229328920417068 24.685174684364622 11.20873016791455 10 27.1646627243586 30.223230300996377 31.01246340249731 11.59964357214771 11 20.055084304444932 23.84710633816671 38.845775519887056 17.2520338375013 12 17.69178248643144 21.28800064805064 42.44662261465289 18.573594250865032 13 19.547753231573953 23.186557578142178 43.73462326270353 13.531065927580341 14 15.078749725157095 29.078032240519363 38.72750627799058 17.11571175633296 15 12.257414972284263 26.60919074676264 43.921863608484834 17.21153067246826 16 13.078587712496962 28.353141309756637 38.06626317799405 20.502007799752352 17 13.280409197690163 28.301297258514346 39.1971115457165 19.221181998078993 18 12.966336083691111 26.873271382778054 41.260458495828175 18.89993403770266 19 13.807413236434332 27.437538333352617 39.0545404048002 19.700508025412844 20 15.09911703100228 29.441634939187388 40.56773865043454 14.891509379375789 21 14.786201150289887 29.798988578107462 39.93936097577911 15.475449295823546 22 12.113455151423976 27.073009848055268 39.62019603531876 21.193338965201995 23 13.392197933181349 27.799752352076656 39.2153958316457 19.592653883096293 24 15.126427736567413 27.493085531112214 37.263143277053224 20.117343455267147 25 12.855473134829252 31.690602108479048 35.47406061587955 19.979864140812147 26 12.325460289539768 28.354298543043292 40.21223658477312 19.108004582643815 27 15.834423061344937 28.037910962470924 39.19456563248585 16.93310034369829 28 11.581822179533171 29.45251293208198 39.1554511473968 19.810213740988043 29 15.870991633203339 24.896254035851086 39.934500595975145 19.298253734970434 30 15.15373844213255 28.951893812273617 37.730434078205825 18.163933667388008 31 14.788978510177866 31.135361577540415 33.05127700693183 21.02438290534989 32 17.569347204702996 31.055743927418327 32.84112344207469 18.533785425803988 33 17.806348581810607 26.919329267587056 31.911402219573443 23.362919931028898 34 15.398146112274775 27.459062872484463 33.67340562183931 23.469385393401456 35 16.511404534040018 27.014453843750363 34.66399731521877 21.810144306990846 36 17.20389293277632 29.13033918507632 34.53670165368637 19.129066228460996 37 17.585548470716212 29.060210847904827 35.487947415319454 17.866293266059504 38 18.253272077118027 31.119391758184534 29.165981970305392 21.461354194392047 39 22.637103213636838 24.522930577575135 30.12347679168644 22.71648941710159 40 17.808431601726593 25.711872056287827 32.82793098260679 23.6517653593788 41 17.667480587411617 28.410540080774883 30.657424230150554 23.264555101662946 42 18.992744147292655 27.680557323550854 34.57396456551676 18.75273396363973 43 22.159628759561638 25.20801268327682 33.66692511543402 18.965433441727516 44 18.6742735468043 24.824737018735608 33.022577621422705 23.47841181303739 45 19.0552347447722 23.474708666520083 31.6792612222698 25.79079536643792 46 21.06534896369759 26.1606471248539 32.45900501082013 20.314998900628378 47 15.951997963269415 26.168747757860505 37.512642773656744 20.366611505213335 48 17.481166028259636 26.260863527478506 33.50398666867254 22.75398377558932 49 19.595894136298934 22.968997720250425 36.52181963361994 20.913288509830696 50 18.80874405471399 22.31909550646315 33.94952148403597 24.922638954786898 51 17.422147130640063 21.910823602930115 31.420735306030345 29.246293960399477 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4589.0 1 5626.5 2 6664.0 3 13172.0 4 19680.0 5 12742.0 6 5804.0 7 5814.5 8 5825.0 9 6144.0 10 6463.0 11 6422.5 12 6382.0 13 6398.5 14 6415.0 15 5850.0 16 5285.0 17 5043.0 18 4801.0 19 5091.5 20 5382.0 21 5582.5 22 5783.0 23 6089.0 24 6395.0 25 7454.5 26 7950.5 27 7387.0 28 7933.5 29 8480.0 30 8477.0 31 8474.0 32 8636.0 33 8798.0 34 9333.0 35 9868.0 36 9994.5 37 10121.0 38 10751.0 39 11381.0 40 13315.0 41 15249.0 42 18149.5 43 21050.0 44 22772.5 45 24495.0 46 36486.5 47 48478.0 48 47468.0 49 46458.0 50 44139.5 51 41821.0 52 32510.0 53 23199.0 54 18468.5 55 13738.0 56 11444.5 57 9151.0 58 8191.5 59 7232.0 60 6803.0 61 6374.0 62 5470.0 63 4566.0 64 3863.0 65 3160.0 66 2436.0 67 1712.0 68 1406.0 69 1100.0 70 863.5 71 627.0 72 570.5 73 514.0 74 393.0 75 218.5 76 165.0 77 144.5 78 124.0 79 90.0 80 56.0 81 33.0 82 10.0 83 12.5 84 15.0 85 10.0 86 5.0 87 3.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 432065.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.54424329990635 #Duplication Level Percentage of deduplicated Percentage of total 1 74.12175200429527 30.05210347077469 2 10.20116802297773 8.271972765336676 3 4.337123066137646 5.275361184453617 4 2.4942477060612944 4.045095433791297 5 1.7238026602035141 3.4945137228158534 6 1.2931959044916403 3.1458989631690915 7 1.0174911619589562 2.8877386458177843 8 0.8381724067793609 2.718645279018439 9 0.6888523882827303 2.513609894543092 >10 3.127627973390959 19.17684314574842 >50 0.09070469649846305 2.574521537357124 >100 0.05026311207239672 3.53466745507406 >500 0.008088316885213264 2.5696025170419112 >1k 0.006932843044468513 6.9271517991322185 >5k 0.0 0.0 >10k+ 5.77736920372376E-4 2.8122741859257236 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12006 2.7787485679238078 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGC 3897 0.9019476236214458 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTC 3772 0.8730167914549894 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCG 3569 0.8260331200166641 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCC 3132 0.7248909307627325 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3097 0.7167902977561247 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 2696 0.6239801881661324 No Hit CCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 2273 0.5260782521148438 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1913 0.4427574554754493 No Hit CTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGCT 1602 0.3707775450453057 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTAGCCAGT 1404 0.3249511068936387 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1172 0.27125548239269553 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1046 0.24209320356890748 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCG 992 0.22959508407299828 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 955 0.2210315577517272 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCT 908 0.21015356485713957 No Hit TCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 865 0.20020135859187851 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 842 0.19487808547325056 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 834 0.19302651221459735 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 824 0.1907120456412808 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 805 0.18631455915197945 No Hit GAACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCT 792 0.18330575260666798 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGC 757 0.17520511960006016 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTA 646 0.14951454063624686 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTC 645 0.1492830939789152 No Hit ACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC 582 0.13470195456702116 No Hit TTGTGTGGGATTTCTATTAATTTTAAAAGGTTGATATTGGTTTTTATAGTT 523 0.12104660178445374 No Hit CGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTG 461 0.10669690902989135 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTT 445 0.10299376251258492 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3885989376598428 0.0 2 0.0 0.0 0.0 1.9672965873190376 0.0 3 0.0 0.0 0.0 2.5641975165773667 0.0 4 0.0 0.0 0.0 3.475865899806742 0.0 5 0.0 0.0 0.0 6.332149097936653 0.0 6 0.0 0.0 0.0 7.590987467163505 0.0 7 0.0 0.0 0.0 9.044703921863608 0.0 8 0.0 0.0 0.0 10.90738662006874 0.0 9 0.0 0.0 0.0 11.593163065742424 0.0 10 0.0 0.0 0.0 14.26266881140569 0.0 11 0.0 0.0 0.0 17.52213208660734 0.0 12 0.0 0.0 0.0 20.83112494647796 0.0 13 0.0 0.0 0.0 21.789777001145662 0.0 14 0.0 0.0 0.0 22.192725631560066 0.0 15 0.0 0.0 0.0 23.031719764387304 0.0 16 0.0 0.0 0.0 24.49006515223404 0.0 17 0.0 0.0 0.0 26.283313853239676 0.0 18 0.0 0.0 0.0 28.032587689352297 0.0 19 0.0 0.0 0.0 29.553192228021246 0.0 20 0.0 0.0 0.0 30.687975188918333 0.0 21 0.0 0.0 0.0 31.884091514008308 0.0 22 0.0 0.0 0.0 33.16121416916436 0.0 23 0.0 0.0 0.0 34.24693043870714 0.0 24 0.0 0.0 0.0 35.06949185886383 0.0 25 0.0 0.0 0.0 35.683751287422034 0.0 26 0.0 0.0 0.0 36.224873572263434 0.0 27 0.0 0.0 0.0 36.74562855125965 0.0 28 0.0 0.0 0.0 37.239998611320054 0.0 29 0.0 0.0 0.0 37.75473597722565 0.0 30 0.0 0.0 0.0 38.28197146262715 0.0 31 0.0 0.0 0.0 38.71269369192135 0.0 32 0.0 0.0 0.0 39.15707127399813 0.0 33 0.0 0.0 0.0 39.56696330413248 0.0 34 0.0 0.0 0.0 39.95926538830963 0.0 35 0.0 0.0 0.0 40.3714718850173 0.0 36 0.0 0.0 0.0 40.76007082267714 0.0 37 0.0 0.0 0.0 41.14427227384768 0.0 38 0.0 0.0 0.0 41.52477057850092 0.0 39 0.0 0.0 0.0 41.88420723733697 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 30 2.1623455E-6 45.000004 1 GCGAAAG 30 2.1623455E-6 45.000004 1 TCTAGCG 30 2.1623455E-6 45.000004 1 TGCGAGG 45 3.8380676E-10 45.000004 2 TACTCAC 30 2.1623455E-6 45.000004 30 GTGCGAG 30 2.1623455E-6 45.000004 1 GTTGAGT 25 3.886751E-5 45.0 10 AAGTACG 25 3.886751E-5 45.0 1 AGACTCG 20 7.028394E-4 45.0 1 CGAACCC 25 3.886751E-5 45.0 34 GTTTCGT 20 7.028394E-4 45.0 26 CGGCCAT 25 3.886751E-5 45.0 31 TACGGAG 25 3.886751E-5 45.0 4 GCGCATG 20 7.028394E-4 45.0 1 ACGGGTA 35 1.2095734E-7 45.0 5 CCGTCGA 20 7.028394E-4 45.0 41 TTGAGCG 20 7.028394E-4 45.0 1 GTTACGG 20 7.028394E-4 45.0 2 CTAACGG 25 3.886751E-5 45.0 2 CGCTAGG 20 7.028394E-4 45.0 2 >>END_MODULE