##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3549325_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1153591 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.524543794117672 31.0 31.0 33.0 30.0 34.0 2 31.91386721983788 31.0 31.0 34.0 30.0 34.0 3 31.97934103161346 33.0 31.0 34.0 30.0 34.0 4 35.688106096528145 37.0 35.0 37.0 33.0 37.0 5 35.58872685379827 37.0 35.0 37.0 33.0 37.0 6 35.65610862081969 37.0 35.0 37.0 33.0 37.0 7 36.0563709321588 37.0 35.0 37.0 35.0 37.0 8 36.09806335174252 37.0 35.0 37.0 35.0 37.0 9 37.929077116586384 39.0 38.0 39.0 35.0 39.0 10 37.309351407908004 39.0 37.0 39.0 34.0 39.0 11 36.92453824622418 39.0 37.0 39.0 33.0 39.0 12 36.145676413911 37.0 35.0 39.0 32.0 39.0 13 35.80362017387445 38.0 35.0 39.0 31.0 39.0 14 36.79223919049299 39.0 35.0 41.0 31.0 41.0 15 37.100287710289 39.0 35.0 41.0 32.0 41.0 16 37.28007500058513 39.0 35.0 41.0 33.0 41.0 17 37.220835634119894 39.0 35.0 41.0 32.0 41.0 18 37.169477743845086 38.0 35.0 41.0 32.0 41.0 19 37.11817359878848 38.0 35.0 41.0 32.0 41.0 20 36.9600551668659 38.0 35.0 41.0 32.0 41.0 21 36.81849026214664 38.0 35.0 41.0 32.0 41.0 22 36.71456608104606 38.0 35.0 41.0 31.0 41.0 23 36.669349015378934 38.0 35.0 41.0 31.0 41.0 24 36.68949046932578 38.0 35.0 41.0 32.0 41.0 25 36.67042738717622 38.0 35.0 41.0 32.0 41.0 26 36.50201761282812 38.0 35.0 40.0 31.0 41.0 27 36.448157969332286 38.0 35.0 40.0 31.0 41.0 28 36.427577885056316 38.0 35.0 40.0 31.0 41.0 29 36.406793222207874 38.0 35.0 40.0 31.0 41.0 30 36.354219996515226 38.0 35.0 40.0 31.0 41.0 31 36.223005380589825 38.0 35.0 40.0 31.0 41.0 32 36.06216154598987 38.0 35.0 40.0 30.0 41.0 33 35.976053037861774 38.0 35.0 40.0 30.0 41.0 34 35.88366500778872 38.0 35.0 40.0 30.0 41.0 35 35.78620932375512 38.0 35.0 40.0 30.0 41.0 36 35.61411800196083 38.0 35.0 40.0 29.0 41.0 37 35.52512372235914 38.0 34.0 40.0 29.0 41.0 38 35.444677533025136 37.0 34.0 40.0 29.0 41.0 39 35.480990229639445 37.0 34.0 40.0 29.0 41.0 40 35.31898307112313 37.0 34.0 40.0 28.0 41.0 41 35.28979595021112 37.0 34.0 40.0 28.0 41.0 42 35.22310333558428 37.0 34.0 40.0 27.0 41.0 43 35.081440475870565 37.0 34.0 40.0 27.0 41.0 44 34.89030340909387 37.0 34.0 40.0 26.0 41.0 45 34.87154892851973 37.0 34.0 40.0 26.0 41.0 46 34.757560521883406 36.0 34.0 40.0 26.0 41.0 47 34.67072645330971 36.0 34.0 40.0 26.0 41.0 48 34.554242361460865 36.0 34.0 40.0 26.0 41.0 49 34.47368434739869 36.0 34.0 40.0 24.0 41.0 50 34.30086313086701 36.0 34.0 40.0 24.0 41.0 51 33.93830569066506 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 3.0 12 3.0 13 7.0 14 13.0 15 21.0 16 61.0 17 157.0 18 400.0 19 733.0 20 1379.0 21 2298.0 22 3632.0 23 5378.0 24 7786.0 25 11251.0 26 14770.0 27 17625.0 28 19950.0 29 23965.0 30 28323.0 31 34287.0 32 43350.0 33 56315.0 34 101823.0 35 172469.0 36 76608.0 37 93167.0 38 146766.0 39 290989.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.830093161267726 24.301420520791165 29.890836526984 12.977649790957107 2 29.296258379269602 27.94239899583128 30.610849079093022 12.150493545806096 3 29.724659779765965 25.2209838668991 32.16148530978484 12.892871043550096 4 26.02993608653327 27.96138319387027 30.706723613481728 15.301957106114733 5 23.12986145002865 32.15229661119062 29.96772686333371 14.750115075447018 6 21.238549884664497 41.8319837793464 26.45426325274729 10.475203083241807 7 88.722606192316 4.406154347598065 5.326931295407125 1.544308164678816 8 89.78494110997745 3.2143107912596407 5.022924069275852 1.977824029487054 9 85.4556770987291 5.433901616777524 6.559690566240548 2.55073071825283 10 48.89263179064331 28.4359014590093 13.147640714950098 9.523826035397294 11 40.77146926423663 22.906298679514663 22.263263149591147 14.05896890665756 12 38.056122143810065 23.029132508835453 23.772030121594224 15.142715225760256 13 22.02210315441088 38.69794407203246 24.216815145055744 15.063137628500916 14 14.858038941011156 41.198657063031874 26.703138287313266 17.240165708643705 15 13.815381708075044 28.213812347703822 41.83692487198669 16.13388107223444 16 15.861340804496567 22.38150262961483 43.05434074988449 18.70281581600411 17 16.061845142689222 24.523336260425054 27.614986594035496 31.79983200285023 18 20.24391660475853 27.363597670231478 32.233347867658466 20.15913785735152 19 26.56643472426536 29.335960492063478 24.436563738794774 19.66104104487639 20 28.66067783122441 26.43727282893157 26.009738286793155 18.892311053050864 21 21.336071449933293 30.309355742199788 27.415262428364993 20.939310379501922 22 21.640772162750924 26.64635906486788 26.224025672877126 25.48884309950407 23 17.90071177739771 32.176395273541495 26.7623447131609 23.1605482358999 24 19.044618066541783 26.62304057503916 35.787120391889324 18.545220966529733 25 17.41449092442642 29.40721624908655 32.35635506865085 20.821937757836185 26 15.774048167851518 37.56574037072065 26.040078329321226 20.620133132106613 27 17.628171509659836 36.337315391676945 28.480197921100288 17.55431517756293 28 15.119656793438924 30.140405048236335 37.71128588901959 17.02865226930515 29 16.069906925418106 26.725503232948245 36.673829806231154 20.530760035402494 30 19.01349785149156 31.329214600321954 31.09767673291487 18.55961081527162 31 28.653396221017672 28.870544239682864 24.240480378227637 18.23557916107182 32 28.021889907254828 29.794181820073145 25.256698431246427 16.9272298414256 33 26.680860027514086 30.11197209409574 24.025672877128894 19.18149500126128 34 18.956111828195606 29.656264655324115 28.16734873971798 23.220274776762302 35 19.814474974232635 28.23132288653431 30.135377269760255 21.818824869472802 36 27.577798370479663 27.229407996421607 27.646540238264688 17.546253394834043 37 20.035697227180172 32.83590111226596 29.657825000368415 17.470576660185454 38 18.66510747743351 34.5890354553737 25.836193243532584 20.909663823660203 39 19.542281449837944 33.1230912862531 27.51122364858949 19.823403615319467 40 23.58712923384458 28.506983844360782 26.13335228863609 21.772534633158546 41 17.830496250404174 25.85942504752551 29.238352240958882 27.071726461111435 42 21.65984304662571 27.58247940561256 25.278803319374028 25.478874228387703 43 21.327749609697026 28.199422498961933 26.373645425458413 24.09918246588262 44 19.511681349802487 32.3743857224961 27.957569017095313 20.1563639106061 45 18.701948957646167 37.215356222439326 23.404308806154 20.678386013760512 46 22.966198592048656 33.34578719840914 24.764149512262147 18.923864697280056 47 20.959074750063063 29.819754141632522 27.03185097664597 22.189320131658448 48 21.37421321768287 27.06929925770919 31.746000098821852 19.81048742578609 49 20.566041170570852 26.515723510325586 30.420920412867297 22.497314906236266 50 18.58865057026277 32.23430141185221 28.61629468329763 20.56075333458739 51 17.527182510959257 34.64382090359582 25.522737261299717 22.306259324145213 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 792.0 1 1249.5 2 1707.0 3 5421.0 4 9135.0 5 6476.0 6 3817.0 7 3863.5 8 3910.0 9 4287.0 10 4664.0 11 4994.0 12 5324.0 13 5228.0 14 5132.0 15 4691.0 16 4250.0 17 3953.5 18 3657.0 19 3686.5 20 3716.0 21 3775.0 22 3834.0 23 3803.5 24 3773.0 25 5071.0 26 8346.5 27 10324.0 28 13934.5 29 17545.0 30 21332.0 31 25119.0 32 28052.5 33 30986.0 34 34740.5 35 38495.0 36 40886.0 37 43277.0 38 49132.0 39 54987.0 40 72748.5 41 90510.0 42 104891.0 43 119272.0 44 120937.0 45 122602.0 46 115849.0 47 109096.0 48 107740.0 49 106384.0 50 97828.5 51 89273.0 52 77724.0 53 66175.0 54 57872.5 55 49570.0 56 42303.5 57 35037.0 58 30857.0 59 26677.0 60 24692.0 61 22707.0 62 18666.5 63 14626.0 64 11358.0 65 8090.0 66 6533.5 67 4977.0 68 3714.5 69 2452.0 70 2263.5 71 2075.0 72 1877.5 73 1680.0 74 1197.0 75 520.0 76 326.0 77 245.0 78 164.0 79 139.0 80 114.0 81 100.0 82 86.0 83 75.5 84 65.0 85 51.0 86 37.0 87 33.0 88 29.0 89 25.5 90 22.0 91 16.0 92 10.0 93 8.5 94 7.0 95 4.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1153591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.14111888643795 #Duplication Level Percentage of deduplicated Percentage of total 1 79.71440463757371 16.852517054045666 2 8.779326432779404 3.712095677164731 3 2.944625417716102 1.867580280958894 4 1.355383740800383 1.1461731520402358 5 0.7976105627193406 0.8431189865764126 6 0.5622102516121384 0.7131452261103847 7 0.37861720736631693 0.5603073975367706 8 0.30374596320749403 0.5137223615556191 9 0.24456116905713537 0.46532670750388355 >10 2.5909779571314675 12.914858629784371 >50 1.0246875006761194 16.009559582167725 >100 1.2964595860391104 42.647027548272504 >500 0.005336914065392159 0.743104770823787 >1k 0.0016421274047360489 0.42814013483692376 >5k 4.105318511840122E-4 0.5833224906221295 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6721 0.5826155023747585 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1405 0.1217935992912566 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1346 0.11667913497938177 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08919972503252886 0.0 2 0.0 0.0 0.0 0.35263798001198 0.0 3 0.0 0.0 0.0 0.5034713342943903 0.0 4 0.0 0.0 0.0 0.7450647586536303 0.0 5 0.0 0.0 0.0 1.2635327425404672 0.0 6 0.0 0.0 0.0 1.7025098150037579 0.0 7 0.0 0.0 0.0 1.9999289176146484 0.0 8 0.0 0.0 0.0 2.7014773866994455 0.0 9 0.0 0.0 0.0 2.9213993521100634 0.0 10 0.0 0.0 0.0 3.343646058265018 0.0 11 0.0 0.0 0.0 3.93406328586128 0.0 12 0.0 0.0 0.0 4.373127044160365 0.0 13 0.0 0.0 0.0 4.543204653989152 0.0 14 0.0 0.0 0.0 4.612033207609977 0.0 15 0.0 0.0 0.0 4.723251134934305 0.0 16 0.0 0.0 0.0 5.002379526192558 0.0 17 0.0 0.0 0.0 5.335253135643395 0.0 18 0.0 0.0 0.0 5.740856161325808 0.0 19 0.0 0.0 0.0 5.940927070339487 0.0 20 0.0 0.0 0.0 6.151313593812712 0.0 21 0.0 0.0 0.0 6.429835184220404 0.0 22 0.0 0.0 0.0 6.713991353954738 0.0 23 0.0 0.0 0.0 7.021379327681995 0.0 24 0.0 0.0 0.0 7.245288841539159 0.0 25 0.0 0.0 0.0 7.42221463239571 0.0 26 0.0 0.0 0.0 7.5875245212558005 0.0 27 0.0 0.0 0.0 7.7760662141088135 0.0 28 0.0 0.0 0.0 7.9689421987515505 0.0 29 0.0 0.0 0.0 8.181062438940664 0.0 30 0.0 0.0 0.0 8.426556725910656 0.0 31 8.668583579448869E-5 0.0 0.0 8.652026584812122 0.0 32 8.668583579448869E-5 0.0 0.0 8.855651613093375 0.0 33 8.668583579448869E-5 0.0 0.0 9.067858539118284 0.0 34 8.668583579448869E-5 0.0 0.0 9.286740274499367 0.0 35 8.668583579448869E-5 0.0 0.0 9.561187630624719 0.0 36 8.668583579448869E-5 0.0 0.0 9.782409883572255 0.0 37 8.668583579448869E-5 0.0 0.0 10.016548326053169 0.0 38 8.668583579448869E-5 0.0 0.0 10.227628336212748 0.0 39 8.668583579448869E-5 0.0 0.0 10.462980380394784 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCC 20 7.0332957E-4 45.000004 13 TTAGGTA 35 1.211938E-7 45.000004 32 TGTCACG 40 6.8157533E-9 45.000004 1 AACCGTG 20 7.0332957E-4 45.000004 35 AGCGTGT 20 7.0332957E-4 45.000004 27 AATCCGG 20 7.0332957E-4 45.000004 2 GCGACTT 20 7.0332957E-4 45.000004 45 TCCGCTA 40 6.8157533E-9 45.000004 40 CGAGTAA 20 7.0332957E-4 45.000004 38 ACGTTCG 40 6.8157533E-9 45.000004 1 GAGTACG 65 0.0 45.000004 1 GCACGTA 20 7.0332957E-4 45.000004 44 CGCGCAC 20 7.0332957E-4 45.000004 38 CACGATT 20 7.0332957E-4 45.000004 18 TAACGCG 20 7.0332957E-4 45.000004 1 TCGATAG 20 7.0332957E-4 45.000004 1 AACGGTC 20 7.0332957E-4 45.000004 22 TGTTGCG 35 1.211938E-7 45.000004 1 ATCCGAT 20 7.0332957E-4 45.000004 29 AGCGGTA 20 7.0332957E-4 45.000004 4 >>END_MODULE